FFCP PHASE1:Hg19::chr1:92035060..92035074,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:92035060..92035074,- | |||
|description=CAGE_peak_at_chr1:92035060..92035074,- | |description=CAGE_peak_at_chr1:92035060..92035074,- | ||
|id=chr1:92035060..92035074,- | |id=chr1:92035060..92035074,- | ||
|ontology_enrichment_celltype=CL:0002620!7.83e-13!23;CL:0002623!1.33e-10!3;CL:0000569!1.32e-07!4;CL:0000011!1.32e-07!4 | |ontology_enrichment_celltype=CL:0002620!7.83e-13!23;CL:0002623!1.33e-10!3;CL:0000569!1.32e-07!4;CL:0000011!1.32e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.06e-43;3!CL:0000622;2.25e-26;5!CL:0000154;4.20e-22;6!CL:0000135;6.82e-20;3!CL:0000388;6.82e-20;3!CL:0002591;2.21e-15;1!CL:0000150;5.80e-15;9!CL:0002251;4.86e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.92e-43,3;CL:0000622,2.16e-26,5;CL:0000154,4.06e-22,6;CL:0000135,6.50e-20,3;CL:0000388,6.50e-20,3;CL:0002591,3.66e-15,1;CL:0000150,5.66e-15,9;CL:0002251,4.81e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!5.16e-07!57 | |ontology_enrichment_uberon=UBERON:0004923!5.16e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.20e-22;6!UBERON:0003293;4.20e-22;6!UBERON:0003294;4.20e-22;6!UBERON:0010047;4.20e-22;6!UBERON:0003408;4.20e-22;6!UBERON:0000167;4.20e-22;6!UBERON:0007846;6.82e-20;3!UBERON:0000043;6.82e-20;3!UBERON:0007845;6.82e-20;3!UBERON:0002134;7.45e-16;1!UBERON:0005208;7.45e-16;1!UBERON:0004145;7.45e-16;1!UBERON:0005946;7.45e-16;1!UBERON:0005965;7.45e-16;1!UBERON:0002078;7.45e-16;1!UBERON:0001041;7.83e-10;14!UBERON:0002081;1.39e-08;2!UBERON:0002133;1.39e-08;2!UBERON:0000078;2.40e-08;2!UBERON:0002012;2.40e-08;2!UBERON:0008886;2.40e-08;2!UBERON:0000161;2.20e-07;19!UBERON:0000166;2.20e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,4.06e-22,6;UBERON:0003293,4.06e-22,6;UBERON:0003294,4.06e-22,6;UBERON:0010047,4.06e-22,6;UBERON:0000167,4.06e-22,6;UBERON:0007846,6.50e-20,3;UBERON:0000043,6.50e-20,3;UBERON:0007845,6.50e-20,3;UBERON:0004145,7.88e-20,3;UBERON:0002134,7.46e-16,1;UBERON:0005208,7.46e-16,1;UBERON:0005946,7.46e-16,1;UBERON:0005965,7.46e-16,1;UBERON:0002078,7.46e-16,1;UBERON:0003408,1.54e-13,10;UBERON:0002081,1.39e-08,2;UBERON:0002133,1.39e-08,2;UBERON:0010227,1.39e-08,2;UBERON:0000078,3.08e-08,2;UBERON:0007497,3.08e-08,2;UBERON:0003643,3.08e-08,2;UBERON:0003504,3.08e-08,2;UBERON:0003469,3.08e-08,2;UBERON:0003496,3.08e-08,2;UBERON:0002012,3.08e-08,2;UBERON:0008886,3.08e-08,2;UBERON:0007303,3.08e-08,2;UBERON:0002061,3.08e-08,2;UBERON:0005432,3.08e-08,2;UBERON:0004363,3.08e-08,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,5.61888138294577,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0,0.824420233907511,0.257640540045629,0,0.168776332241266,0,0,1.47279837827679,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,3.29294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.71623345421307,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30723814746088,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0,1.66441758450784,0.189403005275089,0.754703705257725,1.77962244319307,0.686520205190771,0.756154618816195,0.777186002913902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45051314914126,6.99945756085195,3.45629830907046,0,0.828324005113957,1.19298766662821,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:92035060..92035074,- | |short_description=p@chr1:92035060..92035074,- | ||
}} | }} |
Latest revision as of 11:16, 28 July 2015
Short description: | p@chr1:92035060..92035074, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:92035060..92035074, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.92e-43 | 3 |
acinar cell | 2.16e-26 | 5 |
protein secreting cell | 4.06e-22 | 6 |
fibrocyte | 6.50e-20 | 3 |
tendon cell | 6.50e-20 | 3 |
smooth muscle cell of the pulmonary artery | 3.66e-15 | 1 |
glandular epithelial cell | 5.66e-15 | 9 |
epithelial cell of alimentary canal | 4.81e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 4.06e-22 | 6 |
gland of oral region | 4.06e-22 | 6 |
gland of foregut | 4.06e-22 | 6 |
oral gland | 4.06e-22 | 6 |
oral cavity | 4.06e-22 | 6 |
dense regular connective tissue | 6.50e-20 | 3 |
tendon | 6.50e-20 | 3 |
regular connective tissue | 6.50e-20 | 3 |
outflow tract | 7.88e-20 | 3 |
tricuspid valve | 7.46e-16 | 1 |
right atrium valve | 7.46e-16 | 1 |
outflow tract of atrium | 7.46e-16 | 1 |
outflow part of right atrium | 7.46e-16 | 1 |
right cardiac atrium | 7.46e-16 | 1 |
gland of gut | 1.54e-13 | 10 |
cardiac atrium | 1.39e-08 | 2 |
atrioventricular valve | 1.39e-08 | 2 |
future cardiac atrium | 1.39e-08 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.08e-08 | 2 |
developing epithelial placode | 3.08e-08 | 2 |
respiratory system arterial blood vessel | 3.08e-08 | 2 |
respiratory system blood vessel | 3.08e-08 | 2 |
respiratory system artery | 3.08e-08 | 2 |
head blood vessel | 3.08e-08 | 2 |
pulmonary artery | 3.08e-08 | 2 |
pulmonary vascular system | 3.08e-08 | 2 |
pharyngeal vasculature | 3.08e-08 | 2 |
truncus arteriosus | 3.08e-08 | 2 |
aortic sac | 3.08e-08 | 2 |
pharyngeal arch artery | 3.08e-08 | 2 |