FFCP PHASE1:Hg19::chr3:48470746..48470759,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5364 | |EntrezGene=5364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9103 | |HGNC=9103 | ||
|TSSclassifier=strong | |||
|UniProt=O43157 | |UniProt=O43157 | ||
|association_with_transcript=112bp_to_ENST00000358459,ENST00000358536,NM_002673,uc003csw.2_5end | |association_with_transcript=112bp_to_ENST00000358459,ENST00000358536,NM_002673,uc003csw.2_5end | ||
|cluster_id=chr3:48470746..48470759,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_PLXNB1_5end | |description=CAGE_peak_1_at_PLXNB1_5end | ||
|id=chr3:48470746..48470759,- | |id=chr3:48470746..48470759,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.13e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-34!57;UBERON:0005068!2.06e-34!57;UBERON:0006241!2.06e-34!57;UBERON:0007135!2.06e-34!57;UBERON:0007023!6.64e-34!115;UBERON:0005743!2.07e-33!86;UBERON:0000073!6.87e-33!94;UBERON:0001016!6.87e-33!94;UBERON:0001017!1.32e-31!82;UBERON:0003075!1.13e-30!86;UBERON:0007284!1.13e-30!86;UBERON:0004121!8.96e-29!169;UBERON:0002616!1.38e-28!59;UBERON:0002346!6.86e-28!90;UBERON:0000924!4.50e-27!173;UBERON:0006601!4.50e-27!173;UBERON:0000955!7.87e-27!69;UBERON:0006238!7.87e-27!69;UBERON:0003080!2.29e-26!42;UBERON:0002780!7.88e-26!41;UBERON:0001890!7.88e-26!41;UBERON:0006240!7.88e-26!41;UBERON:0000033!6.81e-25!123;UBERON:0000153!2.32e-24!129;UBERON:0007811!2.32e-24!129;UBERON:0003056!2.89e-23!61;UBERON:0002020!1.37e-22!34;UBERON:0003528!1.37e-22!34;UBERON:0001893!1.52e-22!34;UBERON:0002791!6.73e-22!33;UBERON:0001869!4.81e-21!32;UBERON:0004111!1.12e-18!241;UBERON:0000483!3.16e-18!309;UBERON:0000475!5.07e-18!365;UBERON:0000119!2.48e-17!312;UBERON:0000025!6.66e-17!194;UBERON:0000956!2.33e-16!25;UBERON:0000203!2.33e-16!25;UBERON:0002619!5.05e-16!22;UBERON:0000481!1.01e-15!347;UBERON:0000064!1.52e-15!219;UBERON:0000477!1.76e-15!286;UBERON:0001950!1.17e-14!20;UBERON:0000468!9.54e-14!659;UBERON:0000467!2.62e-12!625;UBERON:0000480!4.26e-12!626;UBERON:0000922!1.06e-11!612;UBERON:0000062!5.97e-11!511;UBERON:0002050!1.34e-10!605;UBERON:0005423!1.34e-10!605;UBERON:0000923!2.17e-10!604;UBERON:0005291!2.17e-10!604;UBERON:0006598!2.17e-10!604;UBERON:0002532!2.17e-10!604;UBERON:0003076!4.27e-09!15;UBERON:0003057!4.27e-09!15;UBERON:0004732!7.83e-08!13;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0002420!1.34e-07!9;UBERON:0007245!1.34e-07!9;UBERON:0010009!1.34e-07!9;UBERON:0010011!1.34e-07!9;UBERON:0000454!1.34e-07!9;UBERON:0004733!3.99e-07!12;UBERON:0002028!3.99e-07!12;UBERON:0007277!3.99e-07!12;UBERON:0002298!5.83e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!2.06e-34!57;UBERON:0005068!2.06e-34!57;UBERON:0006241!2.06e-34!57;UBERON:0007135!2.06e-34!57;UBERON:0007023!6.64e-34!115;UBERON:0005743!2.07e-33!86;UBERON:0000073!6.87e-33!94;UBERON:0001016!6.87e-33!94;UBERON:0001017!1.32e-31!82;UBERON:0003075!1.13e-30!86;UBERON:0007284!1.13e-30!86;UBERON:0004121!8.96e-29!169;UBERON:0002616!1.38e-28!59;UBERON:0002346!6.86e-28!90;UBERON:0000924!4.50e-27!173;UBERON:0006601!4.50e-27!173;UBERON:0000955!7.87e-27!69;UBERON:0006238!7.87e-27!69;UBERON:0003080!2.29e-26!42;UBERON:0002780!7.88e-26!41;UBERON:0001890!7.88e-26!41;UBERON:0006240!7.88e-26!41;UBERON:0000033!6.81e-25!123;UBERON:0000153!2.32e-24!129;UBERON:0007811!2.32e-24!129;UBERON:0003056!2.89e-23!61;UBERON:0002020!1.37e-22!34;UBERON:0003528!1.37e-22!34;UBERON:0001893!1.52e-22!34;UBERON:0002791!6.73e-22!33;UBERON:0001869!4.81e-21!32;UBERON:0004111!1.12e-18!241;UBERON:0000483!3.16e-18!309;UBERON:0000475!5.07e-18!365;UBERON:0000119!2.48e-17!312;UBERON:0000025!6.66e-17!194;UBERON:0000956!2.33e-16!25;UBERON:0000203!2.33e-16!25;UBERON:0002619!5.05e-16!22;UBERON:0000481!1.01e-15!347;UBERON:0000064!1.52e-15!219;UBERON:0000477!1.76e-15!286;UBERON:0001950!1.17e-14!20;UBERON:0000468!9.54e-14!659;UBERON:0000467!2.62e-12!625;UBERON:0000480!4.26e-12!626;UBERON:0000922!1.06e-11!612;UBERON:0000062!5.97e-11!511;UBERON:0002050!1.34e-10!605;UBERON:0005423!1.34e-10!605;UBERON:0000923!2.17e-10!604;UBERON:0005291!2.17e-10!604;UBERON:0006598!2.17e-10!604;UBERON:0002532!2.17e-10!604;UBERON:0003076!4.27e-09!15;UBERON:0003057!4.27e-09!15;UBERON:0004732!7.83e-08!13;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0002420!1.34e-07!9;UBERON:0007245!1.34e-07!9;UBERON:0010009!1.34e-07!9;UBERON:0010011!1.34e-07!9;UBERON:0000454!1.34e-07!9;UBERON:0004733!3.99e-07!12;UBERON:0002028!3.99e-07!12;UBERON:0007277!3.99e-07!12;UBERON:0002298!5.83e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.08e-26;34!UBERON:0003528;2.27e-26;34!UBERON:0002020;2.27e-26;34!UBERON:0002791;5.00e-26;32!UBERON:0001869;6.70e-26;32!UBERON:0002780;1.22e-25;41!UBERON:0001890;1.22e-25;41!UBERON:0002619;1.62e-23;22!UBERON:0000073;1.31e-22;53!UBERON:0002616;1.31e-22;53!UBERON:0000956;1.31e-21;25!UBERON:0000203;1.31e-21;25!UBERON:0001950;1.95e-21;20!UBERON:0001017;6.65e-16;75!UBERON:0000955;1.30e-15;68!UBERON:0001016;4.34e-14;83!UBERON:0007023;2.98e-12;114!UBERON:0000125;6.74e-11;9!UBERON:0002308;6.74e-11;9!UBERON:0002420;1.02e-10;9!UBERON:0007245;1.02e-10;9!UBERON:0010009;1.02e-10;9!UBERON:0010011;1.02e-10;9!UBERON:0000454;1.02e-10;9!UBERON:0009663;9.13e-09;7!UBERON:0004732;2.87e-08;13!UBERON:0001871;4.10e-08;6!UBERON:0002298;6.84e-08;6!UBERON:0000200;2.15e-07;6!UBERON:0004733;2.84e-07;12!UBERON:0002028;2.84e-07;12!UBERON:0011216;3.40e-07;132 | |||
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| ||
|short_description=p1@PLXNB1 | |short_description=p1@PLXNB1 | ||
}} | }} |
Latest revision as of 13:55, 18 September 2015
Short description: | p1@PLXNB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLXNB1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 112bp_to_ENST00000358459, ENST00000358536, NM_002673, uc003csw.2_5end |
EntrezGene: | PLXNB1 |
HGNC: | 9103 |
UniProt: | O43157 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data