FFCP PHASE1:Hg19::chr5:71494196..71494211,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4131 | |EntrezGene=4131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6836 | |HGNC=6836 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_AF085863_5end | |association_with_transcript=142bp_to_AF085863_5end | ||
|cluster_id=chr5:71494196..71494211,+ | |||
|coexpression_cluster_id=C284 | |coexpression_cluster_id=C284 | ||
|description=CAGE_peak_33_at_MAP1B_5end | |description=CAGE_peak_33_at_MAP1B_5end | ||
|id=chr5:71494196..71494211,+ | |id=chr5:71494196..71494211,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.69e-14!180;CL:0000057!1.61e-09!75;CL:0002620!8.56e-07!23 | |ontology_enrichment_celltype=CL:0000055!7.69e-14!180;CL:0000057!1.61e-09!75;CL:0002620!8.56e-07!23 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.14e-21!57;UBERON:0005068!7.14e-21!57;UBERON:0006241!7.14e-21!57;UBERON:0007135!7.14e-21!57;UBERON:0001017!1.83e-20!82;UBERON:0000073!9.92e-20!94;UBERON:0001016!9.92e-20!94;UBERON:0005743!2.52e-19!86;UBERON:0000955!3.24e-18!69;UBERON:0006238!3.24e-18!69;UBERON:0002780!3.32e-17!41;UBERON:0001890!3.32e-17!41;UBERON:0006240!3.32e-17!41;UBERON:0002020!1.14e-16!34;UBERON:0003528!1.14e-16!34;UBERON:0003080!1.87e-16!42;UBERON:0001893!2.80e-16!34;UBERON:0003075!4.38e-16!86;UBERON:0007284!4.38e-16!86;UBERON:0002616!6.51e-16!59;UBERON:0002791!1.33e-15!33;UBERON:0001869!2.36e-15!32;UBERON:0000475!1.16e-14!365;UBERON:0002346!1.99e-14!90;UBERON:0000956!4.51e-13!25;UBERON:0000203!4.51e-13!25;UBERON:0003056!7.05e-13!61;UBERON:0000025!9.07e-13!194;UBERON:0002619!1.99e-11!22;UBERON:0004121!1.80e-10!169;UBERON:0000033!1.83e-10!123;UBERON:0001950!3.88e-10!20;UBERON:0000483!5.58e-10!309;UBERON:0000119!8.44e-10!312;UBERON:0000924!1.18e-09!173;UBERON:0006601!1.18e-09!173;UBERON:0000153!1.91e-09!129;UBERON:0007811!1.91e-09!129;UBERON:0004111!2.95e-09!241;UBERON:0007023!1.90e-08!115 | |ontology_enrichment_uberon=UBERON:0001049!7.14e-21!57;UBERON:0005068!7.14e-21!57;UBERON:0006241!7.14e-21!57;UBERON:0007135!7.14e-21!57;UBERON:0001017!1.83e-20!82;UBERON:0000073!9.92e-20!94;UBERON:0001016!9.92e-20!94;UBERON:0005743!2.52e-19!86;UBERON:0000955!3.24e-18!69;UBERON:0006238!3.24e-18!69;UBERON:0002780!3.32e-17!41;UBERON:0001890!3.32e-17!41;UBERON:0006240!3.32e-17!41;UBERON:0002020!1.14e-16!34;UBERON:0003528!1.14e-16!34;UBERON:0003080!1.87e-16!42;UBERON:0001893!2.80e-16!34;UBERON:0003075!4.38e-16!86;UBERON:0007284!4.38e-16!86;UBERON:0002616!6.51e-16!59;UBERON:0002791!1.33e-15!33;UBERON:0001869!2.36e-15!32;UBERON:0000475!1.16e-14!365;UBERON:0002346!1.99e-14!90;UBERON:0000956!4.51e-13!25;UBERON:0000203!4.51e-13!25;UBERON:0003056!7.05e-13!61;UBERON:0000025!9.07e-13!194;UBERON:0002619!1.99e-11!22;UBERON:0004121!1.80e-10!169;UBERON:0000033!1.83e-10!123;UBERON:0001950!3.88e-10!20;UBERON:0000483!5.58e-10!309;UBERON:0000119!8.44e-10!312;UBERON:0000924!1.18e-09!173;UBERON:0006601!1.18e-09!173;UBERON:0000153!1.91e-09!129;UBERON:0007811!1.91e-09!129;UBERON:0004111!2.95e-09!241;UBERON:0007023!1.90e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.59e-24;25!UBERON:0000203;3.59e-24;25!UBERON:0002619;1.36e-23;22!UBERON:0001950;6.19e-22;20!UBERON:0003528;3.53e-18;34!UBERON:0002020;3.53e-18;34!UBERON:0002791;8.73e-18;32!UBERON:0001869;8.77e-18;32!UBERON:0001893;3.44e-15;34!UBERON:0001872;8.77e-14;5!UBERON:0002780;5.45e-12;41!UBERON:0001890;5.45e-12;41!UBERON:0000073;8.22e-11;53!UBERON:0002616;8.22e-11;53!UBERON:0000955;6.87e-08;68!UBERON:0001017;1.17e-07;75!UBERON:0000200;5.36e-07;6!UBERON:0002298;9.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.24e-24,25;UBERON:0000203,4.24e-24,25;UBERON:0002619,1.59e-23,22;UBERON:0001950,9.04e-22,20;UBERON:0003528,6.99e-20,34;UBERON:0002020,6.99e-20,34;UBERON:0002791,2.33e-18,32;UBERON:0001869,2.33e-18,32;UBERON:0000073,5.68e-18,53;UBERON:0002616,5.68e-18,53;UBERON:0001893,3.85e-17,34;UBERON:0001049,8.21e-17,56;UBERON:0005068,8.21e-17,56;UBERON:0006241,8.21e-17,56;UBERON:0007135,8.21e-17,56;UBERON:0001017,1.04e-16,81;UBERON:0000955,1.21e-16,68;UBERON:0006238,1.21e-16,68;UBERON:0002780,4.77e-16,41;UBERON:0001890,4.77e-16,41;UBERON:0003080,4.77e-16,41;UBERON:0006240,4.77e-16,41;UBERON:0001016,1.40e-14,89;UBERON:0001872,1.20e-13,5;UBERON:0003075,1.13e-11,82;UBERON:0007284,1.13e-11,82;UBERON:0003056,2.15e-11,61;UBERON:0002346,6.01e-11,86;UBERON:0010314,1.54e-09,132;UBERON:0010371,1.61e-09,104;UBERON:0000025,4.39e-08,192;UBERON:0004121,8.05e-08,171;UBERON:0000924,8.05e-08,171;UBERON:0006601,8.05e-08,171;UBERON:0000200,6.74e-07,6 | |||
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| ||
|short_description=p33@MAP1B | |short_description=p33@MAP1B | ||
}} | }} |
Latest revision as of 14:34, 18 September 2015
Short description: | p33@MAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_MAP1B_5end |
Coexpression cluster: | C284_parietal_occipital_medial_temporal_olfactory_locus_hippocampus |
Association with transcript: | 142bp_to_AF085863_5end |
EntrezGene: | MAP1B |
HGNC: | 6836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.24e-24 | 25 |
pallium | 4.24e-24 | 25 |
regional part of cerebral cortex | 1.59e-23 | 22 |
neocortex | 9.04e-22 | 20 |
brain grey matter | 6.99e-20 | 34 |
gray matter | 6.99e-20 | 34 |
regional part of telencephalon | 2.33e-18 | 32 |
cerebral hemisphere | 2.33e-18 | 32 |
regional part of nervous system | 5.68e-18 | 53 |
regional part of brain | 5.68e-18 | 53 |
telencephalon | 3.85e-17 | 34 |
neural tube | 8.21e-17 | 56 |
neural rod | 8.21e-17 | 56 |
future spinal cord | 8.21e-17 | 56 |
neural keel | 8.21e-17 | 56 |
central nervous system | 1.04e-16 | 81 |
brain | 1.21e-16 | 68 |
future brain | 1.21e-16 | 68 |
regional part of forebrain | 4.77e-16 | 41 |
forebrain | 4.77e-16 | 41 |
anterior neural tube | 4.77e-16 | 41 |
future forebrain | 4.77e-16 | 41 |
nervous system | 1.40e-14 | 89 |
parietal lobe | 1.20e-13 | 5 |
neural plate | 1.13e-11 | 82 |
presumptive neural plate | 1.13e-11 | 82 |
pre-chordal neural plate | 2.15e-11 | 61 |
neurectoderm | 6.01e-11 | 86 |
structure with developmental contribution from neural crest | 1.54e-09 | 132 |
ecto-epithelium | 1.61e-09 | 104 |
tube | 4.39e-08 | 192 |
ectoderm-derived structure | 8.05e-08 | 171 |
ectoderm | 8.05e-08 | 171 |
presumptive ectoderm | 8.05e-08 | 171 |
gyrus | 6.74e-07 | 6 |