FFCP PHASE1:Hg19::chr5:133702835..133702890,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51265 | |EntrezGene=51265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15483 | |HGNC=15483 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVW4 | |UniProt=Q8IVW4 | ||
|association_with_transcript=-70bp_to_ENST00000265334,ENST00000435211,NM_001113575,NM_016508,uc003kzf.3,uc003kzg.3_5end | |association_with_transcript=-70bp_to_ENST00000265334,ENST00000435211,NM_001113575,NM_016508,uc003kzf.3,uc003kzg.3_5end | ||
|cluster_id=chr5:133702835..133702890,- | |||
|description=CAGE_peak_2_at_CDKL3_5end | |description=CAGE_peak_2_at_CDKL3_5end | ||
|id=chr5:133702835..133702890,- | |id=chr5:133702835..133702890,- | ||
|ontology_enrichment_celltype=CL:0000838!3.51e-11!52;CL:0000542!3.89e-11!53;CL:0000051!3.89e-11!53 | |ontology_enrichment_celltype=CL:0000838!3.51e-11!52;CL:0000542!3.89e-11!53;CL:0000051!3.89e-11!53 | ||
|ontology_enrichment_celltype_v019=CL:0000542;8.32e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.56e-11,52;CL:0000542,2.84e-11,53;CL:0000051,2.84e-11,53 | |||
|ontology_enrichment_development_v019=CL:0000051;8.32e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.68e-20!57;UBERON:0005068!2.68e-20!57;UBERON:0006241!2.68e-20!57;UBERON:0007135!2.68e-20!57;UBERON:0001017!3.59e-19!82;UBERON:0000955!8.18e-19!69;UBERON:0006238!8.18e-19!69;UBERON:0000073!1.98e-18!94;UBERON:0001016!1.98e-18!94;UBERON:0002616!5.18e-18!59;UBERON:0002780!9.87e-18!41;UBERON:0001890!9.87e-18!41;UBERON:0006240!9.87e-18!41;UBERON:0005743!1.05e-17!86;UBERON:0003080!1.07e-16!42;UBERON:0002346!5.38e-15!90;UBERON:0003075!2.38e-14!86;UBERON:0007284!2.38e-14!86;UBERON:0002020!3.03e-14!34;UBERON:0003528!3.03e-14!34;UBERON:0001893!6.21e-14!34;UBERON:0001869!1.45e-13!32;UBERON:0002791!1.49e-13!33;UBERON:0000153!2.60e-12!129;UBERON:0007811!2.60e-12!129;UBERON:0000033!1.38e-11!123;UBERON:0003056!2.77e-11!61;UBERON:0000956!1.35e-10!25;UBERON:0000203!1.35e-10!25;UBERON:0002619!4.57e-10!22;UBERON:0001950!4.50e-09!20;UBERON:0000924!7.01e-09!173;UBERON:0006601!7.01e-09!173;UBERON:0004121!2.37e-08!169;UBERON:0007023!6.97e-07!115 | |ontology_enrichment_uberon=UBERON:0001049!2.68e-20!57;UBERON:0005068!2.68e-20!57;UBERON:0006241!2.68e-20!57;UBERON:0007135!2.68e-20!57;UBERON:0001017!3.59e-19!82;UBERON:0000955!8.18e-19!69;UBERON:0006238!8.18e-19!69;UBERON:0000073!1.98e-18!94;UBERON:0001016!1.98e-18!94;UBERON:0002616!5.18e-18!59;UBERON:0002780!9.87e-18!41;UBERON:0001890!9.87e-18!41;UBERON:0006240!9.87e-18!41;UBERON:0005743!1.05e-17!86;UBERON:0003080!1.07e-16!42;UBERON:0002346!5.38e-15!90;UBERON:0003075!2.38e-14!86;UBERON:0007284!2.38e-14!86;UBERON:0002020!3.03e-14!34;UBERON:0003528!3.03e-14!34;UBERON:0001893!6.21e-14!34;UBERON:0001869!1.45e-13!32;UBERON:0002791!1.49e-13!33;UBERON:0000153!2.60e-12!129;UBERON:0007811!2.60e-12!129;UBERON:0000033!1.38e-11!123;UBERON:0003056!2.77e-11!61;UBERON:0000956!1.35e-10!25;UBERON:0000203!1.35e-10!25;UBERON:0002619!4.57e-10!22;UBERON:0001950!4.50e-09!20;UBERON:0000924!7.01e-09!173;UBERON:0006601!7.01e-09!173;UBERON:0004121!2.37e-08!169;UBERON:0007023!6.97e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.04e-13;41!UBERON:0001890;1.04e-13;41!UBERON:0003528;8.16e-13;34!UBERON:0002020;8.16e-13;34!UBERON:0001869;8.81e-13;32!UBERON:0002791;9.91e-13;32!UBERON:0000073;1.48e-12;53!UBERON:0002616;1.48e-12;53!UBERON:0001893;2.48e-12;34!UBERON:0000956;9.02e-11;25!UBERON:0000203;9.02e-11;25!UBERON:0002619;2.92e-10;22!UBERON:0000955;1.65e-09;68!UBERON:0001950;3.39e-09;20!UBERON:0001017;1.24e-08;75!UBERON:0001016;1.64e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.50e-21,56;UBERON:0005068,1.50e-21,56;UBERON:0006241,1.50e-21,56;UBERON:0007135,1.50e-21,56;UBERON:0000073,1.04e-20,53;UBERON:0002616,1.04e-20,53;UBERON:0001016,1.91e-20,89;UBERON:0001017,5.80e-20,81;UBERON:0000955,6.72e-20,68;UBERON:0006238,6.72e-20,68;UBERON:0002780,5.82e-18,41;UBERON:0001890,5.82e-18,41;UBERON:0003080,5.82e-18,41;UBERON:0006240,5.82e-18,41;UBERON:0002346,1.35e-15,86;UBERON:0003075,6.05e-15,82;UBERON:0007284,6.05e-15,82;UBERON:0003528,2.00e-14,34;UBERON:0002020,2.00e-14,34;UBERON:0001893,4.15e-14,34;UBERON:0001869,9.78e-14,32;UBERON:0002791,1.63e-13,32;UBERON:0003056,1.63e-11,61;UBERON:0000956,1.00e-10,25;UBERON:0000203,1.00e-10,25;UBERON:0002619,3.46e-10,22;UBERON:0004121,1.50e-09,171;UBERON:0000924,1.50e-09,171;UBERON:0006601,1.50e-09,171;UBERON:0001950,3.52e-09,20;UBERON:0010314,6.82e-09,132;UBERON:0010371,2.54e-08,104;UBERON:0007023,8.13e-07,114 | |||
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| ||
|short_description=p2@CDKL3 | |short_description=p2@CDKL3 | ||
}} | }} |
Latest revision as of 15:28, 24 September 2015
Short description: | p2@CDKL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDKL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -70bp_to_ENST00000265334, ENST00000435211, NM_001113575, NM_016508, uc003kzf.3, uc003kzg.3_5end |
EntrezGene: | CDKL3 |
HGNC: | 15483 |
UniProt: | Q8IVW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.56e-11 | 52 |
lymphocyte | 2.84e-11 | 53 |
common lymphoid progenitor | 2.84e-11 | 53 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.50e-21 | 56 |
neural rod | 1.50e-21 | 56 |
future spinal cord | 1.50e-21 | 56 |
neural keel | 1.50e-21 | 56 |
regional part of nervous system | 1.04e-20 | 53 |
regional part of brain | 1.04e-20 | 53 |
nervous system | 1.91e-20 | 89 |
central nervous system | 5.80e-20 | 81 |
brain | 6.72e-20 | 68 |
future brain | 6.72e-20 | 68 |
regional part of forebrain | 5.82e-18 | 41 |
forebrain | 5.82e-18 | 41 |
anterior neural tube | 5.82e-18 | 41 |
future forebrain | 5.82e-18 | 41 |
neurectoderm | 1.35e-15 | 86 |
neural plate | 6.05e-15 | 82 |
presumptive neural plate | 6.05e-15 | 82 |
brain grey matter | 2.00e-14 | 34 |
gray matter | 2.00e-14 | 34 |
telencephalon | 4.15e-14 | 34 |
cerebral hemisphere | 9.78e-14 | 32 |
regional part of telencephalon | 1.63e-13 | 32 |
pre-chordal neural plate | 1.63e-11 | 61 |
cerebral cortex | 1.00e-10 | 25 |
pallium | 1.00e-10 | 25 |
regional part of cerebral cortex | 3.46e-10 | 22 |
ectoderm-derived structure | 1.50e-09 | 171 |
ectoderm | 1.50e-09 | 171 |
presumptive ectoderm | 1.50e-09 | 171 |
neocortex | 3.52e-09 | 20 |
structure with developmental contribution from neural crest | 6.82e-09 | 132 |
ecto-epithelium | 2.54e-08 | 104 |
adult organism | 8.13e-07 | 114 |