FFCP PHASE1:Hg19::chr7:151107489..151107503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=349136 | |EntrezGene=349136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28020 | |HGNC=28020 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TI4 | |UniProt=Q86TI4 | ||
|association_with_transcript=-365bp_to_NM_198285,uc003wkb.2,uc011kvk.1_5end | |association_with_transcript=-365bp_to_NM_198285,uc003wkb.2,uc011kvk.1_5end | ||
|cluster_id=chr7:151107489..151107503,- | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_6_at_WDR86_5end | |description=CAGE_peak_6_at_WDR86_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000624!8.90e-10!6;CL:0000623!2.90e-08!3;CL:0000825!2.90e-08!3;CL:0000791!2.86e-07!18;CL:0000789!2.86e-07!18;CL:0002420!2.86e-07!18;CL:0002419!2.86e-07!18;CL:0000790!2.86e-07!18 | |ontology_enrichment_celltype=CL:0000624!8.90e-10!6;CL:0000623!2.90e-08!3;CL:0000825!2.90e-08!3;CL:0000791!2.86e-07!18;CL:0000789!2.86e-07!18;CL:0002420!2.86e-07!18;CL:0002419!2.86e-07!18;CL:0000790!2.86e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.85e-20;18!CL:0000789;4.85e-20;18!CL:0002419;4.85e-20;18!CL:0000625;8.15e-19;11!CL:0000084;1.45e-14;25!CL:0000623;9.31e-09;3!CL:0002586;1.26e-08;3!CL:0000149;8.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0000791;4.85e-20;18!CL:0000789;4.85e-20;18!CL:0002419;4.85e-20;18!CL:0000625;8.15e-19;11!CL:0000084;1.45e-14;25!CL:0000623;9.31e-09;3!CL:0002586;1.26e-08;3!CL:0000149;8.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.22e-20,18;CL:0000789,5.22e-20,18;CL:0002420,5.22e-20,18;CL:0002419,5.22e-20,18;CL:0000790,5.22e-20,18;CL:0000625,9.78e-19,11;CL:0000084,1.53e-14,25;CL:0000827,1.53e-14,25;CL:0000838,7.90e-11,52;CL:0000542,1.26e-10,53;CL:0000051,1.26e-10,53;CL:0000623,8.96e-09,3;CL:0000825,8.96e-09,3;CL:0002586,1.04e-08,3;CL:0000149,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000790;4.85e-20;18!UBERON:0007123;1.77e-18;5 | |ontology_enrichment_development_v019=CL:0000790;4.85e-20;18!UBERON:0007123;1.77e-18;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.72e-14!115 | |ontology_enrichment_uberon=UBERON:0007023!3.72e-14!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.77e-18;5!UBERON:0001781;1.26e-08;3!UBERON:0001782;1.26e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002046;1.77e-18;5!UBERON:0001781;1.26e-08;3!UBERON:0001782;1.26e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.77e-18,5;UBERON:0004117,1.77e-18,5;UBERON:0007689,1.77e-18,5;UBERON:0007123,1.77e-18,5;UBERON:0003091,1.77e-18,5;UBERON:0009722,6.10e-09,11;UBERON:0007690,6.10e-09,11;UBERON:0001782,1.04e-08,3;UBERON:0005424,1.04e-08,3;UBERON:0001781,7.70e-07,4 | |||
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| ||
|short_description=p6@WDR86 | |short_description=p6@WDR86 | ||
}} | }} |
Latest revision as of 06:29, 17 September 2015
Short description: | p6@WDR86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WDR86_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -365bp_to_NM_198285, uc003wkb.2, uc011kvk.1_5end |
EntrezGene: | WDR86 |
HGNC: | 28020 |
UniProt: | Q86TI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.22e-20 | 18 |
alpha-beta T cell | 5.22e-20 | 18 |
immature T cell | 5.22e-20 | 18 |
mature T cell | 5.22e-20 | 18 |
immature alpha-beta T cell | 5.22e-20 | 18 |
CD8-positive, alpha-beta T cell | 9.78e-19 | 11 |
T cell | 1.53e-14 | 25 |
pro-T cell | 1.53e-14 | 25 |
lymphoid lineage restricted progenitor cell | 7.90e-11 | 52 |
lymphocyte | 1.26e-10 | 53 |
common lymphoid progenitor | 1.26e-10 | 53 |
natural killer cell | 8.96e-09 | 3 |
pro-NK cell | 8.96e-09 | 3 |
retinal pigment epithelial cell | 1.04e-08 | 3 |
visual pigment cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.77e-18 | 5 |
pharyngeal pouch | 1.77e-18 | 5 |
thyroid diverticulum | 1.77e-18 | 5 |
pharyngeal pouch 2 | 1.77e-18 | 5 |
thyroid primordium | 1.77e-18 | 5 |
entire pharyngeal arch endoderm | 6.10e-09 | 11 |
early pharyngeal endoderm | 6.10e-09 | 11 |
pigmented layer of retina | 1.04e-08 | 3 |
presumptive retinal pigmented epithelium | 1.04e-08 | 3 |
layer of retina | 7.70e-07 | 4 |