FFCP PHASE1:Hg19::chr4:72204731..72204748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |EntrezGene=8671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |HGNC=11030 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6R1 | |UniProt=Q9Y6R1 | ||
|association_with_transcript=-21bp_to_ENST00000340595,ENST00000512686,NM_003759,uc003hgb.3,uc003hgc.3_5end | |association_with_transcript=-21bp_to_ENST00000340595,ENST00000512686,NM_003759,uc003hgb.3,uc003hgc.3_5end | ||
|cluster_id=chr4:72204731..72204748,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_3_at_SLC4A4_5end | |description=CAGE_peak_3_at_SLC4A4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.73e-21;10!UBERON:0007687;7.73e-21;10!UBERON:0003104;1.13e-07;31 | |ontology_enrichment_development_v019=UBERON:0003918;7.73e-21;10!UBERON:0007687;7.73e-21;10!UBERON:0003104;1.13e-07;31 | ||
|ontology_enrichment_disease=DOID:3910!2.00e-08!2 | |ontology_enrichment_disease=DOID:3910!2.00e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.34e-15!1;UBERON:0001874!2.06e-15!1;UBERON:0002038!2.38e-15!1;UBERON:0009661!2.38e-15!1;UBERON:0009663!5.59e-09!7;UBERON:0002113!7.91e-09!27;UBERON:0003918!7.91e-09!27;UBERON:0005095!7.91e-09!27;UBERON:0007687!7.91e-09!27;UBERON:0004903!2.00e-08!2;UBERON:0002173!2.00e-08!2;UBERON:0002186!2.00e-08!2;UBERON:0002950!2.48e-08!2;UBERON:0001891!2.48e-08!2;UBERON:0009616!2.48e-08!2;UBERON:0000489!1.76e-07!32;UBERON:0002308!3.55e-07!9;UBERON:0002420!3.55e-07!9;UBERON:0000125!3.55e-07!9;UBERON:0007245!3.55e-07!9;UBERON:0010009!3.55e-07!9;UBERON:0010011!3.55e-07!9;UBERON:0000454!3.55e-07!9 | |ontology_enrichment_uberon=UBERON:0001301!1.34e-15!1;UBERON:0001874!2.06e-15!1;UBERON:0002038!2.38e-15!1;UBERON:0009661!2.38e-15!1;UBERON:0009663!5.59e-09!7;UBERON:0002113!7.91e-09!27;UBERON:0003918!7.91e-09!27;UBERON:0005095!7.91e-09!27;UBERON:0007687!7.91e-09!27;UBERON:0004903!2.00e-08!2;UBERON:0002173!2.00e-08!2;UBERON:0002186!2.00e-08!2;UBERON:0002950!2.48e-08!2;UBERON:0001891!2.48e-08!2;UBERON:0009616!2.48e-08!2;UBERON:0000489!1.76e-07!32;UBERON:0002308!3.55e-07!9;UBERON:0002420!3.55e-07!9;UBERON:0000125!3.55e-07!9;UBERON:0007245!3.55e-07!9;UBERON:0010009!3.55e-07!9;UBERON:0010011!3.55e-07!9;UBERON:0000454!3.55e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.45e-09;24!UBERON:0011143;2.45e-09;24!UBERON:0000489;6.67e-08;29!UBERON:0006554;1.13e-07;30!UBERON:0001008;1.13e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0002113;2.45e-09;24!UBERON:0011143;2.45e-09;24!UBERON:0000489;6.67e-08;29!UBERON:0006554;1.13e-07;30!UBERON:0001008;1.13e-07;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.07e-08,26;UBERON:0003918,1.07e-08,26;UBERON:0011143,1.07e-08,26;UBERON:0005095,1.07e-08,26;UBERON:0007687,1.07e-08,26;UBERON:0000489,1.86e-07,31 | |||
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|short_description=p3@SLC4A4 | |short_description=p3@SLC4A4 | ||
}} | }} |
Latest revision as of 11:55, 18 September 2015
Short description: | p3@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC4A4_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -21bp_to_ENST00000340595, ENST00000512686, NM_003759, uc003hgb.3, uc003hgc.3_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | Q9Y6R1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.07e-08 | 26 |
kidney mesenchyme | 1.07e-08 | 26 |
upper urinary tract | 1.07e-08 | 26 |
kidney rudiment | 1.07e-08 | 26 |
kidney field | 1.07e-08 | 26 |
cavitated compound organ | 1.86e-07 | 31 |