FFCP PHASE1:Hg19::chr17:66511224..66511241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5573 | |EntrezGene=5573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9388 | |HGNC=9388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=262bp_to_uc002jhl.2_5end | |association_with_transcript=262bp_to_uc002jhl.2_5end | ||
|cluster_id=chr17:66511224..66511241,+ | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_29_at_PRKAR1A_5end | |description=CAGE_peak_29_at_PRKAR1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!6.16e-07!15 | |ontology_enrichment_celltype=CL:0000136!6.16e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000569;3.32e-16;4 | |ontology_enrichment_celltype_v019=CL:0000569;3.32e-16;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.18e-16,4;CL:0000011,4.18e-16,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.41e-16;1!UBERON:0003852;1.41e-16;1!CL:0000011;3.32e-16;4!UBERON:0005062;3.32e-16;4!UBERON:0007284;3.32e-16;4 | |ontology_enrichment_development_v019=UBERON:0003099;1.41e-16;1!UBERON:0003852;1.41e-16;1!CL:0000011;3.32e-16;4!UBERON:0005062;3.32e-16;4!UBERON:0007284;3.32e-16;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.93e-09;2 | |ontology_enrichment_disease_v019=DOID:1909;5.93e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002616!9.67e-07!59 | |ontology_enrichment_uberon=UBERON:0002616!9.67e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.41e-16;1!UBERON:0005705;1.41e-16;1!UBERON:0008193;1.41e-16;1!UBERON:0010912;1.41e-16;1!UBERON:0005208;1.41e-16;1!UBERON:0002514;1.41e-16;1!UBERON:0003457;1.41e-16;1!UBERON:0008907;1.41e-16;1!UBERON:0008001;1.41e-16;1!UBERON:0007213;1.41e-16;1!UBERON:0009891;1.41e-16;1!UBERON:0007914;1.41e-16;1!UBERON:0007375;1.41e-16;1!UBERON:0003323;1.41e-16;1!UBERON:0010258;1.41e-16;1!UBERON:0004145;1.41e-16;1!UBERON:0005946;1.41e-16;1!UBERON:0005253;1.41e-16;1!UBERON:0007842;1.41e-16;1!UBERON:0005965;1.41e-16;1!UBERON:0002397;1.41e-16;1!UBERON:0003113;1.41e-16;1!UBERON:0003277;1.41e-16;1!UBERON:0001709;1.41e-16;1!UBERON:0002078;1.41e-16;1!UBERON:0002244;1.41e-16;1!UBERON:0005620;1.41e-16;1!UBERON:0010364;1.41e-16;1!UBERON:0004288;1.41e-16;1!UBERON:0002081;5.93e-09;2!UBERON:0002133;5.93e-09;2!UBERON:0004089;5.93e-09;2!UBERON:0010313;4.95e-07;10!UBERON:0000948;7.94e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002134;1.41e-16;1!UBERON:0005705;1.41e-16;1!UBERON:0008193;1.41e-16;1!UBERON:0010912;1.41e-16;1!UBERON:0005208;1.41e-16;1!UBERON:0002514;1.41e-16;1!UBERON:0003457;1.41e-16;1!UBERON:0008907;1.41e-16;1!UBERON:0008001;1.41e-16;1!UBERON:0007213;1.41e-16;1!UBERON:0009891;1.41e-16;1!UBERON:0007914;1.41e-16;1!UBERON:0007375;1.41e-16;1!UBERON:0003323;1.41e-16;1!UBERON:0010258;1.41e-16;1!UBERON:0004145;1.41e-16;1!UBERON:0005946;1.41e-16;1!UBERON:0005253;1.41e-16;1!UBERON:0007842;1.41e-16;1!UBERON:0005965;1.41e-16;1!UBERON:0002397;1.41e-16;1!UBERON:0003113;1.41e-16;1!UBERON:0003277;1.41e-16;1!UBERON:0001709;1.41e-16;1!UBERON:0002078;1.41e-16;1!UBERON:0002244;1.41e-16;1!UBERON:0005620;1.41e-16;1!UBERON:0010364;1.41e-16;1!UBERON:0004288;1.41e-16;1!UBERON:0002081;5.93e-09;2!UBERON:0002133;5.93e-09;2!UBERON:0004089;5.93e-09;2!UBERON:0010313;4.95e-07;10!UBERON:0000948;7.94e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.21e-16,1;UBERON:0005208,1.21e-16,1;UBERON:0005946,1.21e-16,1;UBERON:0005965,1.21e-16,1;UBERON:0002078,1.21e-16,1;UBERON:0005705,2.63e-16,1;UBERON:0008193,2.63e-16,1;UBERON:0010912,2.63e-16,1;UBERON:0002514,2.63e-16,1;UBERON:0003457,2.63e-16,1;UBERON:0008907,2.63e-16,1;UBERON:0008001,2.63e-16,1;UBERON:0007213,2.63e-16,1;UBERON:0009891,2.63e-16,1;UBERON:0007914,2.63e-16,1;UBERON:0009292,2.63e-16,1;UBERON:0003099,2.63e-16,1;UBERON:0007375,2.63e-16,1;UBERON:0003323,2.63e-16,1;UBERON:0010258,2.63e-16,1;UBERON:0007842,2.63e-16,1;UBERON:0009494,2.63e-16,1;UBERON:0010042,2.63e-16,1;UBERON:0010045,2.63e-16,1;UBERON:0010259,2.63e-16,1;UBERON:0010359,2.63e-16,1;UBERON:0009526,2.63e-16,1;UBERON:0002397,2.63e-16,1;UBERON:0003113,2.63e-16,1;UBERON:0003277,2.63e-16,1;UBERON:0001709,2.63e-16,1;UBERON:0004066,2.63e-16,1;UBERON:0002244,2.63e-16,1;UBERON:0005620,2.63e-16,1;UBERON:0004362,2.63e-16,1;UBERON:0010364,2.63e-16,1;UBERON:0010046,2.63e-16,1;UBERON:0005868,2.63e-16,1;UBERON:0007238,2.63e-16,1;UBERON:0004288,2.63e-16,1;UBERON:0004068,2.63e-16,1;UBERON:0010334,2.63e-16,1;UBERON:0003852,2.63e-16,1;UBERON:0010253,2.63e-16,1;UBERON:0002081,5.49e-09,2;UBERON:0002133,5.49e-09,2;UBERON:0010227,5.49e-09,2;UBERON:0005253,8.09e-09,2;UBERON:0004089,8.09e-09,2;UBERON:0010313,5.43e-07,10;UBERON:0002342,5.43e-07,10;UBERON:0005062,5.43e-07,10 | |||
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| ||
|short_description=p29@PRKAR1A | |short_description=p29@PRKAR1A | ||
}} | }} |
Latest revision as of 00:13, 17 September 2015
Short description: | p29@PRKAR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_PRKAR1A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 262bp_to_uc002jhl.2_5end |
EntrezGene: | PRKAR1A |
HGNC: | 9388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.18e-16 | 4 |
migratory trunk neural crest cell | 4.18e-16 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.94e-09 | 2 |