FFCP PHASE1:Hg19::chr19:58071201..58071238,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=162972 | |EntrezGene=162972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28643 | |HGNC=28643 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000325134,ENST00000344222,ENST00000376230,ENST00000447310,ENST00000457177,uc002qpc.2,uc002qpd.2,uc010eue.1_5end | |association_with_transcript=0bp_to_ENST00000325134,ENST00000344222,ENST00000376230,ENST00000447310,ENST00000457177,uc002qpc.2,uc002qpd.2,uc010eue.1_5end | ||
|cluster_id=chr19:58071201..58071238,- | |||
|description=CAGE_peak_1_at_ZNF550_5end | |description=CAGE_peak_1_at_ZNF550_5end | ||
|id=chr19:58071201..58071238,- | |id=chr19:58071201..58071238,- | ||
|ontology_enrichment_celltype=CL:0000542!8.03e-07!53;CL:0000051!8.03e-07!53 | |ontology_enrichment_celltype=CL:0000542!8.03e-07!53;CL:0000051!8.03e-07!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.16e-07,53;CL:0000051,7.16e-07,53;CL:0000838,9.16e-07,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-13!115;UBERON:0001049!1.26e-11!57;UBERON:0005068!1.26e-11!57;UBERON:0006241!1.26e-11!57;UBERON:0007135!1.26e-11!57;UBERON:0002616!9.96e-10!59;UBERON:0002780!2.04e-09!41;UBERON:0001890!2.04e-09!41;UBERON:0006240!2.04e-09!41;UBERON:0003080!1.00e-08!42;UBERON:0002346!1.19e-08!90;UBERON:0001017!1.42e-08!82;UBERON:0005743!1.74e-08!86;UBERON:0003075!2.39e-08!86;UBERON:0007284!2.39e-08!86;UBERON:0000073!3.34e-08!94;UBERON:0001016!3.34e-08!94;UBERON:0001893!3.54e-08!34;UBERON:0002020!4.42e-08!34;UBERON:0003528!4.42e-08!34;UBERON:0000955!5.29e-08!69;UBERON:0006238!5.29e-08!69;UBERON:0002791!7.80e-08!33;UBERON:0001869!2.33e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-13!115;UBERON:0001049!1.26e-11!57;UBERON:0005068!1.26e-11!57;UBERON:0006241!1.26e-11!57;UBERON:0007135!1.26e-11!57;UBERON:0002616!9.96e-10!59;UBERON:0002780!2.04e-09!41;UBERON:0001890!2.04e-09!41;UBERON:0006240!2.04e-09!41;UBERON:0003080!1.00e-08!42;UBERON:0002346!1.19e-08!90;UBERON:0001017!1.42e-08!82;UBERON:0005743!1.74e-08!86;UBERON:0003075!2.39e-08!86;UBERON:0007284!2.39e-08!86;UBERON:0000073!3.34e-08!94;UBERON:0001016!3.34e-08!94;UBERON:0001893!3.54e-08!34;UBERON:0002020!4.42e-08!34;UBERON:0003528!4.42e-08!34;UBERON:0000955!5.29e-08!69;UBERON:0006238!5.29e-08!69;UBERON:0002791!7.80e-08!33;UBERON:0001869!2.33e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.56e-07;53!UBERON:0002616;3.56e-07;53!UBERON:0002780;5.19e-07;41!UBERON:0001890;5.19e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0000073;3.56e-07;53!UBERON:0002616;3.56e-07;53!UBERON:0002780;5.19e-07;41!UBERON:0001890;5.19e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.60e-13,114;UBERON:0001049,3.21e-12,56;UBERON:0005068,3.21e-12,56;UBERON:0006241,3.21e-12,56;UBERON:0007135,3.21e-12,56;UBERON:0000073,1.05e-11,53;UBERON:0002616,1.05e-11,53;UBERON:0002780,2.70e-09,41;UBERON:0001890,2.70e-09,41;UBERON:0003080,2.70e-09,41;UBERON:0006240,2.70e-09,41;UBERON:0001017,6.99e-09,81;UBERON:0002346,9.61e-09,86;UBERON:0001016,1.83e-08,89;UBERON:0003075,1.92e-08,82;UBERON:0007284,1.92e-08,82;UBERON:0000955,2.29e-08,68;UBERON:0006238,2.29e-08,68;UBERON:0001893,4.00e-08,34;UBERON:0003528,5.00e-08,34;UBERON:0002020,5.00e-08,34;UBERON:0002791,2.33e-07,32;UBERON:0001869,2.64e-07,32;UBERON:0010371,8.19e-07,104 | |||
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| ||
|short_description=p1@ZNF550 | |short_description=p1@ZNF550 | ||
}} | }} |
Latest revision as of 05:53, 20 September 2015
Short description: | p1@ZNF550 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF550_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325134, ENST00000344222, ENST00000376230, ENST00000447310, ENST00000457177, uc002qpc.2, uc002qpd.2, uc010eue.1_5end |
EntrezGene: | ZNF550 |
HGNC: | 28643 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.16e-07 | 53 |
common lymphoid progenitor | 7.16e-07 | 53 |
lymphoid lineage restricted progenitor cell | 9.16e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.60e-13 | 114 |
neural tube | 3.21e-12 | 56 |
neural rod | 3.21e-12 | 56 |
future spinal cord | 3.21e-12 | 56 |
neural keel | 3.21e-12 | 56 |
regional part of nervous system | 1.05e-11 | 53 |
regional part of brain | 1.05e-11 | 53 |
regional part of forebrain | 2.70e-09 | 41 |
forebrain | 2.70e-09 | 41 |
anterior neural tube | 2.70e-09 | 41 |
future forebrain | 2.70e-09 | 41 |
central nervous system | 6.99e-09 | 81 |
neurectoderm | 9.61e-09 | 86 |
nervous system | 1.83e-08 | 89 |
neural plate | 1.92e-08 | 82 |
presumptive neural plate | 1.92e-08 | 82 |
brain | 2.29e-08 | 68 |
future brain | 2.29e-08 | 68 |
telencephalon | 4.00e-08 | 34 |
brain grey matter | 5.00e-08 | 34 |
gray matter | 5.00e-08 | 34 |
regional part of telencephalon | 2.33e-07 | 32 |
cerebral hemisphere | 2.64e-07 | 32 |
ecto-epithelium | 8.19e-07 | 104 |