FFCP PHASE1:Hg19::chr11:30605486..30605499,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:30605486..30605499,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr11:30605486..30605499,- | |description=CAGE_peak_at_chr11:30605486..30605499,- | ||
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|ontology_enrichment_celltype=CL:0002319!2.64e-13!25;CL:0002605!2.03e-11!3;CL:0000047!4.30e-11!8 | |ontology_enrichment_celltype=CL:0002319!2.64e-13!25;CL:0002605!2.03e-11!3;CL:0000047!4.30e-11!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;4.12e-54;3!CL:0002319;3.90e-42;25!CL:0000047;6.23e-37;2!CL:0000540;7.78e-28;6!CL:0000404;7.78e-28;6!CL:0000128;1.10e-23;7!CL:0000126;1.10e-23;7!CL:0000127;1.10e-23;7!CL:0000243;3.72e-10;15!CL:0000125;3.72e-10;15!CL:0000095;3.78e-09;17 | |ontology_enrichment_celltype_v019=CL:0002605;4.12e-54;3!CL:0002319;3.90e-42;25!CL:0000047;6.23e-37;2!CL:0000540;7.78e-28;6!CL:0000404;7.78e-28;6!CL:0000128;1.10e-23;7!CL:0000126;1.10e-23;7!CL:0000127;1.10e-23;7!CL:0000243;3.72e-10;15!CL:0000125;3.72e-10;15!CL:0000095;3.78e-09;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.85e-56,8;CL:0002605,3.76e-54,3;CL:0002319,4.12e-42,25;CL:0000540,7.78e-28,6;CL:0000031,7.78e-28,6;CL:0000404,7.78e-28,6;CL:0000128,1.06e-23,7;CL:0000126,1.06e-23,7;CL:0000127,1.06e-23,7;CL:0002453,1.06e-23,7;CL:0000133,1.79e-18,59;CL:0000221,3.70e-15,72;CL:0000243,3.67e-10,15;CL:0000125,3.67e-10,15;CL:0000030,3.67e-10,15;CL:0000339,3.67e-10,15;CL:0000095,3.73e-09,17;CL:0000123,3.73e-09,17 | |||
|ontology_enrichment_development_v019=CL:0000031;7.78e-28;6!CL:0000133;6.14e-14;59!CL:0000339;3.72e-10;15 | |ontology_enrichment_development_v019=CL:0000031;7.78e-28;6!CL:0000133;6.14e-14;59!CL:0000339;3.72e-10;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;8.95e-20;1!DOID:4549;8.95e-20;1!DOID:5861;8.95e-20;1!DOID:6496;8.95e-20;1 | |ontology_enrichment_disease_v019=DOID:3371;8.95e-20;1!DOID:4549;8.95e-20;1!DOID:5861;8.95e-20;1!DOID:6496;8.95e-20;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,8.95e-20,1;DOID:4549,8.95e-20,1;DOID:5861,8.95e-20,1;DOID:6496,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.89e-25!86;UBERON:0001017!4.50e-25!82;UBERON:0000073!4.60e-24!94;UBERON:0001016!4.60e-24!94;UBERON:0001869!9.05e-21!32;UBERON:0004121!4.45e-20!169;UBERON:0000924!2.15e-19!173;UBERON:0006601!2.15e-19!173;UBERON:0001893!2.36e-19!34;UBERON:0002780!1.05e-17!41;UBERON:0001890!1.05e-17!41;UBERON:0006240!1.05e-17!41;UBERON:0002791!1.39e-17!33;UBERON:0003080!3.39e-17!42;UBERON:0002020!5.63e-17!34;UBERON:0003528!5.63e-17!34;UBERON:0001049!6.51e-17!57;UBERON:0005068!6.51e-17!57;UBERON:0006241!6.51e-17!57;UBERON:0007135!6.51e-17!57;UBERON:0000956!2.50e-15!25;UBERON:0000203!2.50e-15!25;UBERON:0003075!8.34e-15!86;UBERON:0007284!8.34e-15!86;UBERON:0000955!1.67e-14!69;UBERON:0006238!1.67e-14!69;UBERON:0000153!3.95e-14!129;UBERON:0007811!3.95e-14!129;UBERON:0000033!6.14e-14!123;UBERON:0007023!6.56e-14!115;UBERON:0002346!6.86e-14!90;UBERON:0003056!1.03e-13!61;UBERON:0002616!1.10e-12!59;UBERON:0002619!1.88e-09!22;UBERON:0001950!2.31e-08!20;UBERON:0001829!1.16e-07!2;UBERON:0003127!2.54e-07!2 | |ontology_enrichment_uberon=UBERON:0005743!1.89e-25!86;UBERON:0001017!4.50e-25!82;UBERON:0000073!4.60e-24!94;UBERON:0001016!4.60e-24!94;UBERON:0001869!9.05e-21!32;UBERON:0004121!4.45e-20!169;UBERON:0000924!2.15e-19!173;UBERON:0006601!2.15e-19!173;UBERON:0001893!2.36e-19!34;UBERON:0002780!1.05e-17!41;UBERON:0001890!1.05e-17!41;UBERON:0006240!1.05e-17!41;UBERON:0002791!1.39e-17!33;UBERON:0003080!3.39e-17!42;UBERON:0002020!5.63e-17!34;UBERON:0003528!5.63e-17!34;UBERON:0001049!6.51e-17!57;UBERON:0005068!6.51e-17!57;UBERON:0006241!6.51e-17!57;UBERON:0007135!6.51e-17!57;UBERON:0000956!2.50e-15!25;UBERON:0000203!2.50e-15!25;UBERON:0003075!8.34e-15!86;UBERON:0007284!8.34e-15!86;UBERON:0000955!1.67e-14!69;UBERON:0006238!1.67e-14!69;UBERON:0000153!3.95e-14!129;UBERON:0007811!3.95e-14!129;UBERON:0000033!6.14e-14!123;UBERON:0007023!6.56e-14!115;UBERON:0002346!6.86e-14!90;UBERON:0003056!1.03e-13!61;UBERON:0002616!1.10e-12!59;UBERON:0002619!1.88e-09!22;UBERON:0001950!2.31e-08!20;UBERON:0001829!1.16e-07!2;UBERON:0003127!2.54e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.22e-11;25!UBERON:0000203;2.22e-11;25!UBERON:0002791;1.64e-09;32!UBERON:0001869;1.64e-09;32!UBERON:0001893;4.03e-09;34!UBERON:0003528;2.45e-08;34!UBERON:0002020;2.45e-08;34!UBERON:0002418;1.82e-07;3!UBERON:0004755;1.82e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000956;2.22e-11;25!UBERON:0000203;2.22e-11;25!UBERON:0002791;1.64e-09;32!UBERON:0001869;1.64e-09;32!UBERON:0001893;4.03e-09;34!UBERON:0003528;2.45e-08;34!UBERON:0002020;2.45e-08;34!UBERON:0002418;1.82e-07;3!UBERON:0004755;1.82e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.88e-21,81;UBERON:0001016,6.30e-19,89;UBERON:0000956,2.22e-11,25;UBERON:0000203,2.22e-11,25;UBERON:0004121,1.07e-09,171;UBERON:0000924,1.07e-09,171;UBERON:0006601,1.07e-09,171;UBERON:0002791,4.92e-09,32;UBERON:0001869,4.92e-09,32;UBERON:0003528,1.56e-08,34;UBERON:0002020,1.56e-08,34;UBERON:0001893,1.56e-08,34;UBERON:0002418,1.82e-07,3;UBERON:0004755,1.82e-07,3;UBERON:0011216,2.99e-07,223;UBERON:0002780,3.71e-07,41;UBERON:0001890,3.71e-07,41;UBERON:0003080,3.71e-07,41;UBERON:0006240,3.71e-07,41 | |||
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| ||
|short_description=p@chr11:30605486..30605499,- | |short_description=p@chr11:30605486..30605499,- | ||
}} | }} |
Latest revision as of 21:25, 23 July 2015
Short description: | p@chr11:30605486..30605499, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:30605486..30605499, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.85e-56 | 8 |
astrocyte of the cerebral cortex | 3.76e-54 | 3 |
neural cell | 4.12e-42 | 25 |
neuron | 7.78e-28 | 6 |
neuroblast | 7.78e-28 | 6 |
electrically signaling cell | 7.78e-28 | 6 |
oligodendrocyte | 1.06e-23 | 7 |
macroglial cell | 1.06e-23 | 7 |
astrocyte | 1.06e-23 | 7 |
oligodendrocyte precursor cell | 1.06e-23 | 7 |
neurectodermal cell | 1.79e-18 | 59 |
ectodermal cell | 3.70e-15 | 72 |
glial cell (sensu Vertebrata) | 3.67e-10 | 15 |
glial cell | 3.67e-10 | 15 |
glioblast | 3.67e-10 | 15 |
glioblast (sensu Vertebrata) | 3.67e-10 | 15 |
neuron associated cell | 3.73e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.73e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.88e-21 | 81 |
nervous system | 6.30e-19 | 89 |
cerebral cortex | 2.22e-11 | 25 |
pallium | 2.22e-11 | 25 |
ectoderm-derived structure | 1.07e-09 | 171 |
ectoderm | 1.07e-09 | 171 |
presumptive ectoderm | 1.07e-09 | 171 |
regional part of telencephalon | 4.92e-09 | 32 |
cerebral hemisphere | 4.92e-09 | 32 |
brain grey matter | 1.56e-08 | 34 |
gray matter | 1.56e-08 | 34 |
telencephalon | 1.56e-08 | 34 |
cartilage tissue | 1.82e-07 | 3 |
skeletal tissue | 1.82e-07 | 3 |
organ system subdivision | 2.99e-07 | 223 |
regional part of forebrain | 3.71e-07 | 41 |
forebrain | 3.71e-07 | 41 |
anterior neural tube | 3.71e-07 | 41 |
future forebrain | 3.71e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.95e-20 | 1 |
extraosseous chondrosarcoma | 8.95e-20 | 1 |
myxoid chondrosarcoma | 8.95e-20 | 1 |
extraskeletal myxoid chondrosarcoma | 8.95e-20 | 1 |