FFCP PHASE1:Hg19::chr3:99514880..99514892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:99514880..99514892,+ | |||
|coexpression_cluster_id=C1517 | |coexpression_cluster_id=C1517 | ||
|description=CAGE_peak_at_chr3:99514880..99514892,+ | |description=CAGE_peak_at_chr3:99514880..99514892,+ | ||
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|ontology_enrichment_celltype=CL:0000057!4.02e-17!75;CL:0000055!1.58e-14!180;CL:0002620!2.80e-10!23;CL:0000144!2.32e-08!625;CL:0002371!1.30e-07!591;CL:0002334!6.69e-07!12 | |ontology_enrichment_celltype=CL:0000057!4.02e-17!75;CL:0000055!1.58e-14!180;CL:0002620!2.80e-10!23;CL:0000144!2.32e-08!625;CL:0002371!1.30e-07!591;CL:0002334!6.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.25e-13;3!CL:0002620;1.83e-13;23!CL:0002334;3.56e-12;12!CL:0000136;1.29e-11;13!CL:0002617;8.00e-10;2!CL:0002561;1.23e-09;2!CL:0002580;6.27e-07;3!CL:0000057;7.66e-07;73 | |ontology_enrichment_celltype_v019=CL:0002615;1.25e-13;3!CL:0002620;1.83e-13;23!CL:0002334;3.56e-12;12!CL:0000136;1.29e-11;13!CL:0002617;8.00e-10;2!CL:0002561;1.23e-09;2!CL:0002580;6.27e-07;3!CL:0000057;7.66e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.92e-19,76;CL:0002615,1.04e-13,3;CL:0002620,1.49e-13,23;CL:0002334,6.31e-12,12;CL:0000136,4.96e-10,15;CL:0002617,6.76e-10,2;CL:0002561,1.23e-09,2;CL:0000048,1.41e-07,427;CL:0000723,2.39e-07,433;CL:0000134,3.44e-07,354;CL:0000034,4.68e-07,441;CL:0002580,6.29e-07,3;CL:0002320,6.71e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!4.39e-07!5;DOID:450!4.39e-07!5;DOID:66!4.39e-07!5;DOID:423!4.39e-07!5;DOID:0080000!4.39e-07!5;DOID:11722!4.39e-07!5 | |ontology_enrichment_disease=DOID:17!4.39e-07!5;DOID:450!4.39e-07!5;DOID:66!4.39e-07!5;DOID:423!4.39e-07!5;DOID:0080000!4.39e-07!5;DOID:11722!4.39e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.07e-08;5!DOID:450;3.07e-08;5!DOID:66;3.07e-08;5!DOID:423;3.07e-08;5!DOID:0080000;3.07e-08;5!DOID:11722;3.07e-08;5 | |ontology_enrichment_disease_v019=DOID:17;3.07e-08;5!DOID:450;3.07e-08;5!DOID:66;3.07e-08;5!DOID:423;3.07e-08;5!DOID:0080000;3.07e-08;5!DOID:11722;3.07e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.62e-08,5;DOID:450,2.62e-08,5;DOID:66,2.62e-08,5;DOID:423,2.62e-08,5;DOID:0080000,2.62e-08,5;DOID:11722,2.62e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!8.17e-08!6;UBERON:0002358!8.17e-08!6;UBERON:0003684!8.17e-08!6;UBERON:0001178!8.17e-08!6;UBERON:0002097!2.36e-07!40 | |ontology_enrichment_uberon=UBERON:0003688!8.17e-08!6;UBERON:0002358!8.17e-08!6;UBERON:0003684!8.17e-08!6;UBERON:0001178!8.17e-08!6;UBERON:0002097!2.36e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.45e-17;6!UBERON:0002358;2.45e-17;6!UBERON:0003684;2.45e-17;6!UBERON:0001178;2.45e-17;6!UBERON:0004457;1.81e-11;9!UBERON:0000042;1.81e-11;9!UBERON:0005406;3.99e-10;2!UBERON:0005933;1.23e-09;2!UBERON:0005942;1.23e-09;2!UBERON:0005932;1.23e-09;2!UBERON:0002097;1.32e-09;41!UBERON:0000078;5.77e-09;2!UBERON:0002012;5.77e-09;2!UBERON:0008886;5.77e-09;2!UBERON:0002199;2.79e-07;46!UBERON:0002416;2.79e-07;46!UBERON:0000310;2.96e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.45e-17;6!UBERON:0002358;2.45e-17;6!UBERON:0003684;2.45e-17;6!UBERON:0001178;2.45e-17;6!UBERON:0004457;1.81e-11;9!UBERON:0000042;1.81e-11;9!UBERON:0005406;3.99e-10;2!UBERON:0005933;1.23e-09;2!UBERON:0005942;1.23e-09;2!UBERON:0005932;1.23e-09;2!UBERON:0002097;1.32e-09;41!UBERON:0000078;5.77e-09;2!UBERON:0002012;5.77e-09;2!UBERON:0008886;5.77e-09;2!UBERON:0002199;2.79e-07;46!UBERON:0002416;2.79e-07;46!UBERON:0000310;2.96e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.66e-17,6;UBERON:0002358,3.66e-17,6;UBERON:0003684,3.66e-17,6;UBERON:0001178,3.66e-17,6;UBERON:0002097,1.78e-12,41;UBERON:0002199,7.69e-11,46;UBERON:0002416,7.69e-11,46;UBERON:0005406,4.18e-10,2;UBERON:0005933,1.23e-09,2;UBERON:0005942,1.23e-09,2;UBERON:0005932,1.23e-09,2;UBERON:0000078,8.36e-09,2;UBERON:0007497,8.36e-09,2;UBERON:0003643,8.36e-09,2;UBERON:0003504,8.36e-09,2;UBERON:0003469,8.36e-09,2;UBERON:0003496,8.36e-09,2;UBERON:0002012,8.36e-09,2;UBERON:0008886,8.36e-09,2;UBERON:0007303,8.36e-09,2;UBERON:0002061,8.36e-09,2;UBERON:0005432,8.36e-09,2;UBERON:0004363,8.36e-09,2;UBERON:0004457,1.92e-08,12;UBERON:0000042,1.92e-08,12;UBERON:0000310,2.78e-07,10;UBERON:0003102,3.31e-07,99;UBERON:0002384,4.02e-07,371 | |||
|phase1_expression=2.90685406832891,4.71021152560163,1.55049844505568,6.00439790118782,3.5756887554183,8.72338524100369,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0.408001382488506,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.722878304769133,1.00267582127178,0.289693037921647,0,1.94653948121054,0.283604451492204,0.443458794925128,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0.245668634623536,0.206651562351531,0,2.47266929278557,0,0,0.505008341862199,0,0,0,1.22595118319608,0.300476117813194,1.36118619792025,2.51145489964407,4.91181994282705,1.48352330811693,0.600182192168805,0.721367704669072,4.12224864073007,3.16398655763703,0.337552664482532,0.389748020644795,2.27190396819703,1.38074847963449,0.161646056818812,6.39017266529906,1.81353776809752,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.78620756819187,2.16563844500876,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0.951270761172991,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,1.58390374586686,1.20575750823834,0,1.49959486773086,0,0,0,0.958499421966331,2.29723871668228,0,1.59259437334337,2.4657158706046,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.831883446123229,1.60586089917446,0.946214490203608,0.117141414992713,0.300946099727719,0,0,1.32845119707087,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,6.59886485138669,3.08726103876381,0.128139149255701,1.02341449813341,1.28683136914886,4.45254199334973,0,0,0,1.03850885836724,0.116210378459959,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,1.58189712359363,0.953150969619124,0,0,0,0,0.719489830333259,0,0,0,0,0,0,1.46228093778771,0,0.682499557039929,0.707027159768564,1.13008116620243,0,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0.982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,1.86623752597084,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0.189403005275089,1.25783950876288,0,0,0.151230923763239,0.15543720058278,0.887130899937803,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0,0.181848659202559,0.751873899297419,0.464033759878494,1.99047944349308,2.00013882331577,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,4.83593523616777,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0.12729431655633,0.404234377916439,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr3:99514880..99514892,+ | |short_description=p@chr3:99514880..99514892,+ | ||
}} | }} |
Latest revision as of 00:12, 30 July 2015
Short description: | p@chr3:99514880..99514892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99514880..99514892, + |
Coexpression cluster: | C1517_Fibroblast_Preadipocyte_Adipocyte_basal_bone_Osteoblast_pleomorphic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.92e-19 | 76 |
adipocyte of omentum tissue | 1.04e-13 | 3 |
skin fibroblast | 1.49e-13 | 23 |
preadipocyte | 6.31e-12 | 12 |
fat cell | 4.96e-10 | 15 |
adipocyte of breast | 6.76e-10 | 2 |
outer root sheath cell | 1.23e-09 | 2 |
multi fate stem cell | 1.41e-07 | 427 |
somatic stem cell | 2.39e-07 | 433 |
mesenchymal cell | 3.44e-07 | 354 |
stem cell | 4.68e-07 | 441 |
preadipocyte of the breast | 6.29e-07 | 3 |
connective tissue cell | 6.71e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.66e-17 | 6 |
peritoneum | 3.66e-17 | 6 |
abdominal cavity | 3.66e-17 | 6 |
visceral peritoneum | 3.66e-17 | 6 |
skin of body | 1.78e-12 | 41 |
integument | 7.69e-11 | 46 |
integumental system | 7.69e-11 | 46 |
perirenal fat | 4.18e-10 | 2 |
hair root sheath | 1.23e-09 | 2 |
hair outer root sheath | 1.23e-09 | 2 |
bulb of hair follicle | 1.23e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.36e-09 | 2 |
developing epithelial placode | 8.36e-09 | 2 |
respiratory system arterial blood vessel | 8.36e-09 | 2 |
respiratory system blood vessel | 8.36e-09 | 2 |
respiratory system artery | 8.36e-09 | 2 |
head blood vessel | 8.36e-09 | 2 |
pulmonary artery | 8.36e-09 | 2 |
pulmonary vascular system | 8.36e-09 | 2 |
pharyngeal vasculature | 8.36e-09 | 2 |
truncus arteriosus | 8.36e-09 | 2 |
aortic sac | 8.36e-09 | 2 |
pharyngeal arch artery | 8.36e-09 | 2 |
cavity lining | 1.92e-08 | 12 |
serous membrane | 1.92e-08 | 12 |
breast | 2.78e-07 | 10 |
surface structure | 3.31e-07 | 99 |
connective tissue | 4.02e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.62e-08 | 5 |
myotonic disease | 2.62e-08 | 5 |
muscle tissue disease | 2.62e-08 | 5 |
myopathy | 2.62e-08 | 5 |
muscular disease | 2.62e-08 | 5 |
myotonic dystrophy | 2.62e-08 | 5 |