FFCP PHASE1:Hg19::chr13:25254693..25254710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=479 | |EntrezGene=479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13816 | |HGNC=13816 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001upp.2,uc010aaa.2_5end | |association_with_transcript=0bp_to_uc001upp.2,uc010aaa.2_5end | ||
|cluster_id=chr13:25254693..25254710,+ | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_2_at_ATP12A_5end | |description=CAGE_peak_2_at_ATP12A_5end | ||
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|ontology_enrichment_celltype=CL:0000622!1.00e-08!5;CL:0000039!1.88e-08!7;CL:0000586!1.88e-08!7;CL:0002076!3.72e-08!43;CL:0002251!1.19e-07!21;CL:0002322!3.56e-07!5;CL:0000154!3.69e-07!6 | |ontology_enrichment_celltype=CL:0000622!1.00e-08!5;CL:0000039!1.88e-08!7;CL:0000586!1.88e-08!7;CL:0002076!3.72e-08!43;CL:0002251!1.19e-07!21;CL:0002322!3.56e-07!5;CL:0000154!3.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.37e-10;7!CL:0000586;2.37e-10;7!CL:0002159;4.06e-10;14!CL:0000317;3.17e-09;2!CL:1000448;3.17e-09;2!CL:0002308;3.17e-09;2!CL:0002140;3.17e-09;2!CL:0000575;4.34e-09;2!CL:0000622;2.86e-08;5!CL:0002537;3.54e-08;5!CL:0000362;1.28e-07;9!CL:0000154;5.89e-07;6 | |ontology_enrichment_celltype_v019=CL:0000039;2.37e-10;7!CL:0000586;2.37e-10;7!CL:0002159;4.06e-10;14!CL:0000317;3.17e-09;2!CL:1000448;3.17e-09;2!CL:0002308;3.17e-09;2!CL:0002140;3.17e-09;2!CL:0000575;4.34e-09;2!CL:0000622;2.86e-08;5!CL:0002537;3.54e-08;5!CL:0000362;1.28e-07;9!CL:0000154;5.89e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.80e-10,7;CL:0000586,2.80e-10,7;CL:0002159,3.83e-10,14;CL:0000317,2.31e-09,2;CL:1000448,2.31e-09,2;CL:0002308,2.31e-09,2;CL:0002140,2.31e-09,2;CL:0000575,4.53e-09,2;CL:0000622,2.37e-08,5;CL:0002537,3.63e-08,5;CL:0000362,1.18e-07,9;CL:0000154,5.04e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.55e-09!115;UBERON:0001950!1.20e-07!20;UBERON:0001004!2.40e-07!72;UBERON:0004119!6.89e-07!169;UBERON:0000925!6.89e-07!169;UBERON:0006595!6.89e-07!169;UBERON:0004121!6.95e-07!169;UBERON:0002619!9.61e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!6.55e-09!115;UBERON:0001950!1.20e-07!20;UBERON:0001004!2.40e-07!72;UBERON:0004119!6.89e-07!169;UBERON:0000925!6.89e-07!169;UBERON:0006595!6.89e-07!169;UBERON:0004121!6.95e-07!169;UBERON:0002619!9.61e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.50e-10;2!UBERON:0000341;5.81e-10;2!UBERON:0002419;3.17e-09;2!UBERON:0007771;3.17e-09;2!UBERON:0003297;3.17e-09;2!UBERON:0001821;3.17e-09;2!UBERON:0003487;3.17e-09;2!UBERON:0001820;3.17e-09;2!UBERON:0000922;4.11e-08;49!UBERON:0001003;7.08e-07;15!UBERON:0007376;7.08e-07;15!UBERON:0005631;8.23e-07;10!UBERON:0000158;8.23e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0003127;2.50e-10;2!UBERON:0000341;5.81e-10;2!UBERON:0002419;3.17e-09;2!UBERON:0007771;3.17e-09;2!UBERON:0003297;3.17e-09;2!UBERON:0001821;3.17e-09;2!UBERON:0003487;3.17e-09;2!UBERON:0001820;3.17e-09;2!UBERON:0000922;4.11e-08;49!UBERON:0001003;7.08e-07;15!UBERON:0007376;7.08e-07;15!UBERON:0005631;8.23e-07;10!UBERON:0000158;8.23e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.50e-10,2;UBERON:0000341,5.81e-10,2;UBERON:0002419,2.31e-09,2;UBERON:0007771,2.31e-09,2;UBERON:0003297,2.31e-09,2;UBERON:0001821,2.31e-09,2;UBERON:0003487,2.31e-09,2;UBERON:0001820,2.31e-09,2;UBERON:0005089,2.31e-09,2;UBERON:0005088,2.31e-09,2;UBERON:0000065,2.68e-07,54;UBERON:0001003,6.64e-07,15;UBERON:0007376,6.64e-07,15;UBERON:0007383,6.64e-07,15;UBERON:0005178,9.10e-07,34;UBERON:0002224,9.10e-07,34 | |||
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| ||
|short_description=p2@ATP12A | |short_description=p2@ATP12A | ||
}} | }} |
Latest revision as of 21:34, 16 September 2015
Short description: | p2@ATP12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATP12A_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_uc001upp.2, uc010aaa.2_5end |
EntrezGene: | ATP12A |
HGNC: | 13816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.80e-10 | 7 |
germ cell | 2.80e-10 | 7 |
general ecto-epithelial cell | 3.83e-10 | 14 |
sebum secreting cell | 2.31e-09 | 2 |
epithelial cell of sweat gland | 2.31e-09 | 2 |
epithelial cell of skin gland | 2.31e-09 | 2 |
acinar cell of sebaceous gland | 2.31e-09 | 2 |
corneal epithelial cell | 4.53e-09 | 2 |
acinar cell | 2.37e-08 | 5 |
amnion mesenchymal stem cell | 3.63e-08 | 5 |
epidermal cell | 1.18e-07 | 9 |
protein secreting cell | 5.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.50e-10 | 2 |
throat | 5.81e-10 | 2 |
skin gland | 2.31e-09 | 2 |
epidermis gland | 2.31e-09 | 2 |
gland of integumental system | 2.31e-09 | 2 |
sebaceous gland | 2.31e-09 | 2 |
skin sebaceous gland | 2.31e-09 | 2 |
sweat gland | 2.31e-09 | 2 |
sweat gland placode | 2.31e-09 | 2 |
sebaceous gland placode | 2.31e-09 | 2 |
respiratory tract | 2.68e-07 | 54 |
skin epidermis | 6.64e-07 | 15 |
outer epithelium | 6.64e-07 | 15 |
enveloping layer of ectoderm | 6.64e-07 | 15 |
thoracic cavity element | 9.10e-07 | 34 |
thoracic cavity | 9.10e-07 | 34 |