FFCP PHASE1:Hg19::chr10:96046656..96046672,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100128054 | |EntrezGene=100128054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_NR_033969,uc001kjo.1_5end | |association_with_transcript=154bp_to_NR_033969,uc001kjo.1_5end | ||
|cluster_id=chr10:96046656..96046672,- | |||
|coexpression_cluster_id=C1602 | |coexpression_cluster_id=C1602 | ||
|description=CAGE_peak_5_at_LOC100128054_5end | |description=CAGE_peak_5_at_LOC100128054_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002334!8.71e-14!12;CL:0002615!1.01e-11!3;CL:0002580!1.55e-11!3;CL:0002579!2.70e-11!3;CL:0000708!3.40e-10!3;CL:0002617!1.19e-08!2;CL:0000136!2.74e-08!15;CL:0000327!5.31e-08!14;CL:0000325!3.28e-07!39 | |ontology_enrichment_celltype=CL:0002334!8.71e-14!12;CL:0002615!1.01e-11!3;CL:0002580!1.55e-11!3;CL:0002579!2.70e-11!3;CL:0000708!3.40e-10!3;CL:0002617!1.19e-08!2;CL:0000136!2.74e-08!15;CL:0000327!5.31e-08!14;CL:0000325!3.28e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0002617;7.09e-25;2!CL:0002615;7.01e-17;3!CL:0000136;5.73e-15;13!CL:0000222;7.24e-13;1!CL:0002581;7.24e-13;1!CL:0002334;2.04e-09;12!CL:0002097;3.38e-07;2!CL:0002253;4.55e-07;2 | |ontology_enrichment_celltype_v019=CL:0002617;7.09e-25;2!CL:0002615;7.01e-17;3!CL:0000136;5.73e-15;13!CL:0000222;7.24e-13;1!CL:0002581;7.24e-13;1!CL:0002334;2.04e-09;12!CL:0002097;3.38e-07;2!CL:0002253;4.55e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002617,7.09e-25,2;CL:0002615,6.74e-17,3;CL:0000136,5.16e-13,15;CL:0002581,7.68e-13,1;CL:0002334,2.07e-09,12;CL:0002097,3.48e-07,2;CL:0002253,3.93e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;7.24e-13;1!DOID:1909;4.55e-07;2 | |ontology_enrichment_disease_v019=DOID:3112;7.24e-13;1!DOID:1909;4.55e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,6.06e-13,1;DOID:1909,5.60e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.82e-21!6;UBERON:0002358!2.82e-21!6;UBERON:0003684!2.82e-21!6;UBERON:0001178!2.82e-21!6;UBERON:0004457!1.24e-13!12;UBERON:0000042!1.24e-13!12;UBERON:0003210!3.40e-10!3;UBERON:0000310!4.89e-09!10;UBERON:0005406!2.92e-08!2;UBERON:0001443!3.54e-08!11;UBERON:0002200!2.52e-07!11;UBERON:0006876!2.52e-07!11;UBERON:0000970!2.93e-07!20;UBERON:0002104!7.23e-07!21 | |ontology_enrichment_uberon=UBERON:0003688!2.82e-21!6;UBERON:0002358!2.82e-21!6;UBERON:0003684!2.82e-21!6;UBERON:0001178!2.82e-21!6;UBERON:0004457!1.24e-13!12;UBERON:0000042!1.24e-13!12;UBERON:0003210!3.40e-10!3;UBERON:0000310!4.89e-09!10;UBERON:0005406!2.92e-08!2;UBERON:0001443!3.54e-08!11;UBERON:0002200!2.52e-07!11;UBERON:0006876!2.52e-07!11;UBERON:0000970!2.93e-07!20;UBERON:0002104!7.23e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.79e-18;6!UBERON:0002358;1.79e-18;6!UBERON:0003684;1.79e-18;6!UBERON:0001178;1.79e-18;6!UBERON:0007195;7.24e-13;1!UBERON:0004457;1.60e-12;9!UBERON:0000042;1.60e-12;9!UBERON:0000310;2.38e-11;10!UBERON:0001443;2.28e-10;11!UBERON:0005406;4.55e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.79e-18;6!UBERON:0002358;1.79e-18;6!UBERON:0003684;1.79e-18;6!UBERON:0001178;1.79e-18;6!UBERON:0007195;7.24e-13;1!UBERON:0004457;1.60e-12;9!UBERON:0000042;1.60e-12;9!UBERON:0000310;2.38e-11;10!UBERON:0001443;2.28e-10;11!UBERON:0005406;4.55e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.84e-18,6;UBERON:0002358,1.84e-18,6;UBERON:0003684,1.84e-18,6;UBERON:0001178,1.84e-18,6;UBERON:0007195,9.73e-13,1;UBERON:0000310,2.30e-11,10;UBERON:0001443,2.21e-10,11;UBERON:0004457,1.60e-09,12;UBERON:0000042,1.60e-09,12;UBERON:0005406,4.69e-07,2 | |||
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|phase1_expression=5.08699461957559,3.21150785836475,2.67813367782345,14.0102617694383,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,0.50133791063589,0.724232594804119,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0.939269553886573,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,3.37616341233737,0.561320188866147,0.384417447767103,3.07024349440022,0.482561763430822,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58189712359363,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,0,2.35885750512418,0,0,0,0,0,4.32322026025361,0,0,0,0,0,16.2352260613663,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@LOC100128054 | |short_description=p5@LOC100128054 | ||
}} | }} |
Latest revision as of 02:10, 20 September 2015
Short description: | p5@LOC100128054 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOC100128054_5end |
Coexpression cluster: | C1602_mesothelioma_Adipocyte_Preadipocyte_bone_Smooth_papillary_Cardiac |
Association with transcript: | 154bp_to_NR_033969, uc001kjo.1_5end |
EntrezGene: | LOC100128054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 7.09e-25 | 2 |
adipocyte of omentum tissue | 6.74e-17 | 3 |
fat cell | 5.16e-13 | 15 |
perirenal preadipocyte | 7.68e-13 | 1 |
preadipocyte | 2.07e-09 | 12 |
cortical cell of adrenal gland | 3.48e-07 | 2 |
epithelial cell of large intestine | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.84e-18 | 6 |
peritoneum | 1.84e-18 | 6 |
abdominal cavity | 1.84e-18 | 6 |
visceral peritoneum | 1.84e-18 | 6 |
stroma of bone marrow | 9.73e-13 | 1 |
breast | 2.30e-11 | 10 |
chest | 2.21e-10 | 11 |
cavity lining | 1.60e-09 | 12 |
serous membrane | 1.60e-09 | 12 |
perirenal fat | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 6.06e-13 | 1 |
melanoma | 5.60e-07 | 2 |