FFCP PHASE1:Hg19::chr1:3388181..3388194,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:3388181..3388194,+
|short_description=p10@ARHGEF16
|description=CAGE_peak_10_at_ARHGEF16_5end
|association_with_transcript=0bp_to_ENST00000413250,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27237 | |EntrezGene=27237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15515 | |HGNC=15515 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJM7,B0QZD4 | |UniProt=B4DJM7,B0QZD4 | ||
|association_with_transcript=0bp_to_ENST00000413250,ENST00000418137_5end | |||
|cluster_id=chr1:3388181..3388194,+ | |||
|description=CAGE_peak_10_at_ARHGEF16_5end | |||
|id=chr1:3388181..3388194,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.82e-13!254;CL:0002321!8.16e-10!248;CL:0000220!2.08e-09!246;CL:0000223!1.03e-08!59;CL:0002076!8.23e-08!43;CL:0002368!2.90e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.28e-23;1!CL:0000159;2.59e-12;2!CL:0000650;2.59e-12;2!CL:1000500;2.59e-12;2!CL:1000618;2.59e-12;2!CL:1001318;2.59e-12;2!CL:0002173;2.59e-12;2!CL:0000062;6.22e-11;9!CL:0000307;1.21e-08;3!CL:0000182;2.75e-08;12!CL:0000669;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.28e-23,1;CL:0000159,2.59e-12,2;CL:0000650,3.62e-12,2;CL:1000500,3.62e-12,2;CL:1000618,3.62e-12,2;CL:1001318,3.62e-12,2;CL:0002173,3.62e-12,2;CL:0000062,4.08e-09,11;CL:0000375,4.08e-09,11;CL:0000335,4.08e-09,11;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3;CL:0000182,2.55e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000335;4.08e-09;11!UBERON:0004161;5.86e-09;11!CL:0000377;1.21e-08;3!UBERON:0009497;1.02e-07;13 | |||
|ontology_enrichment_disease=DOID:3095!1.24e-07!22;DOID:2994!1.24e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.28e-23;1!DOID:3193;2.59e-12;2!DOID:962;2.59e-12;2!DOID:1192;1.21e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.28e-23,1;DOID:3193,2.32e-12,2;DOID:962,2.32e-12,2;DOID:1192,1.12e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;2.59e-12;2!UBERON:0003567;2.59e-12;2!UBERON:0003838;2.59e-12;2!UBERON:0003586;2.59e-12;2!UBERON:0005169;2.59e-12;2!UBERON:0002321;2.59e-12;2!UBERON:0005215;2.59e-12;2!UBERON:0002303;2.59e-12;2!UBERON:0002319;2.59e-12;2!UBERON:0003891;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.32e-12,2;UBERON:0003567,3.62e-12,2;UBERON:0003838,3.62e-12,2;UBERON:0003586,3.62e-12,2;UBERON:0005169,3.62e-12,2;UBERON:0002321,3.62e-12,2;UBERON:0005215,3.62e-12,2;UBERON:0002303,3.62e-12,2;UBERON:0002319,3.62e-12,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0.69716365721711,0.518305275076852,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.560655421726804,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0,2.83865340936865,3.38288949674411,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.988990300573997,1.81989568406299,0.492137407573744,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.624902039810533,0,0,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0.76872455576384,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0.212574920101683,0.371807292777007,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,1.77377901416012,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p10@ARHGEF16 | |||
}} | }} |
Latest revision as of 17:21, 17 September 2015
Short description: | p10@ARHGEF16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARHGEF16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413250, ENST00000418137_5end |
EntrezGene: | ARHGEF16 |
HGNC: | 15515 |
UniProt: | B4DJM7B0QZD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.28e-23 | 1 |
seromucus secreting cell | 2.59e-12 | 2 |
mesangial cell | 3.62e-12 | 2 |
kidney interstitial cell | 3.62e-12 | 2 |
juxtaglomerular complex cell | 3.62e-12 | 2 |
renal interstitial pericyte | 3.62e-12 | 2 |
extraglomerular mesangial cell | 3.62e-12 | 2 |
osteoblast | 4.08e-09 | 11 |
osteoprogenitor cell | 4.08e-09 | 11 |
mesenchyme condensation cell | 4.08e-09 | 11 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
hepatocyte | 2.55e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.32e-12 | 2 |
abdomen connective tissue | 3.62e-12 | 2 |
abdominal segment connective tissue | 3.62e-12 | 2 |
trunk connective tissue | 3.62e-12 | 2 |
interstitial tissue | 3.62e-12 | 2 |
extraglomerular mesangium | 3.62e-12 | 2 |
kidney interstitium | 3.62e-12 | 2 |
juxtaglomerular apparatus | 3.62e-12 | 2 |
mesangium | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.28e-23 | 1 |
peripheral nerve sheath neoplasm | 2.32e-12 | 2 |
neurofibroma | 2.32e-12 | 2 |
peripheral nervous system neoplasm | 1.12e-08 | 3 |