FFCP PHASE1:Hg19::chr21:27423459..27423508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_ENST00000415997_5end | |association_with_transcript=-111bp_to_ENST00000415997_5end | ||
|cluster_id=chr21:27423459..27423508,- | |||
|coexpression_cluster_id=C1073 | |coexpression_cluster_id=C1073 | ||
|description=CAGE_peak_5_at_APP_5end | |description=CAGE_peak_5_at_APP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!7.37e-09!254 | |ontology_enrichment_celltype=CL:0000066!7.37e-09!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.33e-08,253;CL:0000213,7.11e-07,58;CL:0000215,7.11e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p5@APP | |short_description=p5@APP | ||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p5@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | -111bp_to_ENST00000415997_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.33e-08 | 253 |
lining cell | 7.11e-07 | 58 |
barrier cell | 7.11e-07 | 58 |