FFCP PHASE1:Hg19::chr22:40440317..40440353,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23112 | |EntrezGene=23112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |HGNC=29190 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYM5,Q9UPQ9 | |UniProt=B0QYM5,Q9UPQ9 | ||
|association_with_transcript=-467bp_to_ENST00000301923,ENST00000441751,NM_001024843,uc003aym.2_5end | |association_with_transcript=-467bp_to_ENST00000301923,ENST00000441751,NM_001024843,uc003aym.2_5end | ||
|cluster_id=chr22:40440317..40440353,+ | |||
|description=CAGE_peak_4_at_TNRC6B_5end | |description=CAGE_peak_4_at_TNRC6B_5end | ||
|id=chr22:40440317..40440353,+ | |id=chr22:40440317..40440353,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.30e-11!52;CL:0000542!1.70e-10!53;CL:0000051!1.70e-10!53;CL:0000738!4.72e-08!140;CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24;CL:0002031!4.53e-07!124;CL:0002087!7.28e-07!119 | |ontology_enrichment_celltype=CL:0000838!3.30e-11!52;CL:0000542!1.70e-10!53;CL:0000051!1.70e-10!53;CL:0000738!4.72e-08!140;CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24;CL:0002031!4.53e-07!124;CL:0002087!7.28e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.82e-07;24 | |ontology_enrichment_celltype_v019=CL:0000945;1.82e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.82e-10,52;CL:0000542,4.63e-10,53;CL:0000051,4.63e-10,53;CL:0000945,9.55e-08,24;CL:0000826,9.55e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.27e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-25!115;UBERON:0001049!3.14e-22!57;UBERON:0005068!3.14e-22!57;UBERON:0006241!3.14e-22!57;UBERON:0007135!3.14e-22!57;UBERON:0002780!1.72e-20!41;UBERON:0001890!1.72e-20!41;UBERON:0006240!1.72e-20!41;UBERON:0001017!3.08e-20!82;UBERON:0000955!3.10e-20!69;UBERON:0006238!3.10e-20!69;UBERON:0002616!7.38e-20!59;UBERON:0000073!2.38e-19!94;UBERON:0001016!2.38e-19!94;UBERON:0003080!3.07e-19!42;UBERON:0005743!9.17e-19!86;UBERON:0001893!1.96e-16!34;UBERON:0002020!3.28e-16!34;UBERON:0003528!3.28e-16!34;UBERON:0002791!6.84e-16!33;UBERON:0001869!1.87e-15!32;UBERON:0002346!1.15e-14!90;UBERON:0003075!1.85e-14!86;UBERON:0007284!1.85e-14!86;UBERON:0002619!8.95e-14!22;UBERON:0001950!1.37e-12!20;UBERON:0003056!4.23e-12!61;UBERON:0000956!1.64e-11!25;UBERON:0000203!1.64e-11!25;UBERON:0000153!5.93e-10!129;UBERON:0007811!5.93e-10!129;UBERON:0000924!2.88e-09!173;UBERON:0006601!2.88e-09!173;UBERON:0000033!3.87e-09!123;UBERON:0004121!5.58e-09!169 | |ontology_enrichment_uberon=UBERON:0007023!1.26e-25!115;UBERON:0001049!3.14e-22!57;UBERON:0005068!3.14e-22!57;UBERON:0006241!3.14e-22!57;UBERON:0007135!3.14e-22!57;UBERON:0002780!1.72e-20!41;UBERON:0001890!1.72e-20!41;UBERON:0006240!1.72e-20!41;UBERON:0001017!3.08e-20!82;UBERON:0000955!3.10e-20!69;UBERON:0006238!3.10e-20!69;UBERON:0002616!7.38e-20!59;UBERON:0000073!2.38e-19!94;UBERON:0001016!2.38e-19!94;UBERON:0003080!3.07e-19!42;UBERON:0005743!9.17e-19!86;UBERON:0001893!1.96e-16!34;UBERON:0002020!3.28e-16!34;UBERON:0003528!3.28e-16!34;UBERON:0002791!6.84e-16!33;UBERON:0001869!1.87e-15!32;UBERON:0002346!1.15e-14!90;UBERON:0003075!1.85e-14!86;UBERON:0007284!1.85e-14!86;UBERON:0002619!8.95e-14!22;UBERON:0001950!1.37e-12!20;UBERON:0003056!4.23e-12!61;UBERON:0000956!1.64e-11!25;UBERON:0000203!1.64e-11!25;UBERON:0000153!5.93e-10!129;UBERON:0007811!5.93e-10!129;UBERON:0000924!2.88e-09!173;UBERON:0006601!2.88e-09!173;UBERON:0000033!3.87e-09!123;UBERON:0004121!5.58e-09!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.25e-21;41!UBERON:0001890;2.25e-21;41!UBERON:0001893;9.86e-20;34!UBERON:0002791;1.28e-19;32!UBERON:0001869;1.31e-19;32!UBERON:0003528;1.71e-19;34!UBERON:0002020;1.71e-19;34!UBERON:0002619;1.89e-19;22!UBERON:0000073;4.15e-19;53!UBERON:0002616;4.15e-19;53!UBERON:0001950;9.72e-18;20!UBERON:0000956;4.51e-16;25!UBERON:0000203;4.51e-16;25!UBERON:0000955;3.05e-13;68!UBERON:0001016;7.75e-12;83!UBERON:0001017;1.65e-11;75!UBERON:0002420;2.04e-08;9!UBERON:0000125;2.04e-08;9!UBERON:0007245;2.04e-08;9!UBERON:0002308;2.04e-08;9!UBERON:0010009;2.04e-08;9!UBERON:0010011;2.04e-08;9!UBERON:0000454;2.04e-08;9!UBERON:0007023;3.02e-08;114!UBERON:0001894;1.30e-07;7!UBERON:0009663;1.94e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.25e-21;41!UBERON:0001890;2.25e-21;41!UBERON:0001893;9.86e-20;34!UBERON:0002791;1.28e-19;32!UBERON:0001869;1.31e-19;32!UBERON:0003528;1.71e-19;34!UBERON:0002020;1.71e-19;34!UBERON:0002619;1.89e-19;22!UBERON:0000073;4.15e-19;53!UBERON:0002616;4.15e-19;53!UBERON:0001950;9.72e-18;20!UBERON:0000956;4.51e-16;25!UBERON:0000203;4.51e-16;25!UBERON:0000955;3.05e-13;68!UBERON:0001016;7.75e-12;83!UBERON:0001017;1.65e-11;75!UBERON:0002420;2.04e-08;9!UBERON:0000125;2.04e-08;9!UBERON:0007245;2.04e-08;9!UBERON:0002308;2.04e-08;9!UBERON:0010009;2.04e-08;9!UBERON:0010011;2.04e-08;9!UBERON:0000454;2.04e-08;9!UBERON:0007023;3.02e-08;114!UBERON:0001894;1.30e-07;7!UBERON:0009663;1.94e-07;7 | ||
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|short_description=p4@TNRC6B | |short_description=p4@TNRC6B | ||
}} | }} |
Latest revision as of 19:38, 24 September 2015
Short description: | p4@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNRC6B_5end |
Coexpression cluster: | NA |
Association with transcript: | -467bp_to_ENST00000301923, ENST00000441751, NM_001024843, uc003aym.2_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | B0QYM5Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.82e-10 | 52 |
lymphocyte | 4.63e-10 | 53 |
common lymphoid progenitor | 4.63e-10 | 53 |
lymphocyte of B lineage | 9.55e-08 | 24 |
pro-B cell | 9.55e-08 | 24 |