FFCP PHASE1:Hg19::chr11:64540106..64540118,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:64540106..64540118,- | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr11:64540106..64540118,- | |description=CAGE_peak_at_chr11:64540106..64540118,- | ||
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|ontology_enrichment_celltype=CL:0000542!2.51e-11!53;CL:0000051!2.51e-11!53;CL:0000838!5.11e-11!52;CL:0000738!4.87e-08!140;CL:0002087!1.01e-07!119 | |ontology_enrichment_celltype=CL:0000542!2.51e-11!53;CL:0000051!2.51e-11!53;CL:0000838!5.11e-11!52;CL:0000738!4.87e-08!140;CL:0002087!1.01e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.67e-24;3!CL:0000791;6.29e-16;18!CL:0000789;6.29e-16;18!CL:0002419;6.29e-16;18!CL:0000624;3.61e-13;6!CL:0000775;4.47e-12;3!CL:0000542;1.16e-11;53!CL:0000226;1.87e-11;3!CL:0000842;1.87e-11;3!CL:0000084;2.46e-11;25!CL:0000081;3.18e-07;11!CL:0000625;4.19e-07;11 | |ontology_enrichment_celltype_v019=CL:0000623;1.67e-24;3!CL:0000791;6.29e-16;18!CL:0000789;6.29e-16;18!CL:0002419;6.29e-16;18!CL:0000624;3.61e-13;6!CL:0000775;4.47e-12;3!CL:0000542;1.16e-11;53!CL:0000226;1.87e-11;3!CL:0000842;1.87e-11;3!CL:0000084;2.46e-11;25!CL:0000081;3.18e-07;11!CL:0000625;4.19e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.42e-24,3;CL:0000825,1.42e-24,3;CL:0000838,2.40e-20,52;CL:0000542,6.35e-20,53;CL:0000051,6.35e-20,53;CL:0000791,6.73e-16,18;CL:0000789,6.73e-16,18;CL:0002420,6.73e-16,18;CL:0002419,6.73e-16,18;CL:0000790,6.73e-16,18;CL:0000738,7.33e-16,136;CL:0002087,7.99e-15,115;CL:0000624,3.62e-13,6;CL:0000988,5.72e-13,177;CL:0000037,3.04e-12,168;CL:0000775,3.90e-12,3;CL:0000084,2.58e-11,25;CL:0000827,2.58e-11,25;CL:0000226,3.52e-11,3;CL:0000842,3.52e-11,3;CL:0002031,1.42e-10,120;CL:0002032,6.40e-10,161;CL:0000837,6.40e-10,161;CL:0000081,3.29e-07,11;CL:0000625,4.42e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.29e-16;18!CL:0000051;1.16e-11;53 | |ontology_enrichment_development_v019=CL:0000790;6.29e-16;18!CL:0000051;1.16e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.35e-08;15!UBERON:0000179;1.35e-08;15!UBERON:0000463;1.35e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.35e-08;15!UBERON:0000179;1.35e-08;15!UBERON:0000463;1.35e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.65e-08,15;UBERON:0000179,1.65e-08,15;UBERON:0000463,1.65e-08,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0.601633342410425,1.30206522429511,0.671746422719773,0,0,0.436194716338694,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0,0,0.44931452458598,0.600707571366025,0.32145117339416,0.855038231223746,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,2.84606484554724,1.76171156811282,2.29363936875137,1.32171328579026,0,0,4.52432471261816,5.89516144123747,3.08402248499264,0.334372990781356,0.32592226663359,0.946895611469467,0,0.222820913770347,0,0,0.270803863765016,0.384273959177026,0.130059347559878,0.493313713811028,0,0.289803085735052,1.18629250529648,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0,0,1.61285394579786,1.06976078313403,3.04131248153878,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0.283604451492204,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0.26591592103773,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.336255431980582,1.18218456121156,1.72502059887614,2.43851768931522,0,0,0,0,0,2.99602809578873,5.9832291840805,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,0.74709290462411,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.476463550915578,1.23408681925858,0,0,1.58625035258854,0,0,0.490080431962063,0.185803175125719,0.144269212976445,0.0711418433484141,0.318852545457645,0,0,0,0,0,0.456469358066384,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,0.358042349351218,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0.307801034015188,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0.75901493089674,0,0.421996129056054,0.326465616318295,0,0.216388639742091,0,0,0,0,0.494255755786011,0.104421949505455,0.202203398942031,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.832048038078832,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0,0.126621591911757,0.586654148204409,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0,0,0,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0.39669780522807,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0.306345576763462,0,0.157054096250234,0,0.488105059607853,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0.151649117541648,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr11:64540106..64540118,- | |short_description=p@chr11:64540106..64540118,- | ||
}} | }} |
Latest revision as of 00:19, 24 July 2015
Short description: | p@chr11:64540106..64540118, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64540106..64540118, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.42e-24 | 3 |
pro-NK cell | 1.42e-24 | 3 |
lymphoid lineage restricted progenitor cell | 2.40e-20 | 52 |
lymphocyte | 6.35e-20 | 53 |
common lymphoid progenitor | 6.35e-20 | 53 |
mature alpha-beta T cell | 6.73e-16 | 18 |
alpha-beta T cell | 6.73e-16 | 18 |
immature T cell | 6.73e-16 | 18 |
mature T cell | 6.73e-16 | 18 |
immature alpha-beta T cell | 6.73e-16 | 18 |
leukocyte | 7.33e-16 | 136 |
nongranular leukocyte | 7.99e-15 | 115 |
CD4-positive, alpha-beta T cell | 3.62e-13 | 6 |
hematopoietic cell | 5.72e-13 | 177 |
hematopoietic stem cell | 3.04e-12 | 168 |
neutrophil | 3.90e-12 | 3 |
T cell | 2.58e-11 | 25 |
pro-T cell | 2.58e-11 | 25 |
single nucleate cell | 3.52e-11 | 3 |
mononuclear cell | 3.52e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 1.42e-10 | 120 |
hematopoietic oligopotent progenitor cell | 6.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.40e-10 | 161 |
blood cell | 3.29e-07 | 11 |
CD8-positive, alpha-beta T cell | 4.42e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.65e-08 | 15 |
haemolymphatic fluid | 1.65e-08 | 15 |
organism substance | 1.65e-08 | 15 |