FFCP PHASE1:Hg19::chr1:72748140..72748229,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:72748140..72748229,-
|short_description=p1@NEGR1
|description=CAGE_peak_1_at_NEGR1_5end
|association_with_transcript=0bp_to_ENST00000434200_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=257194 | |EntrezGene=257194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17302 | |HGNC=17302 | ||
|TSSclassifier=strong | |||
|UniProt=B4DI94 | |UniProt=B4DI94 | ||
|association_with_transcript=0bp_to_ENST00000434200_5end | |||
|cluster_id=chr1:72748140..72748229,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NEGR1_5end | |||
|id=chr1:72748140..72748229,- | |||
|ontology_enrichment_celltype=CL:0000055!5.82e-10!180;CL:0000057!4.23e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.49e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.07e-34!115;UBERON:0001049!2.36e-26!57;UBERON:0005068!2.36e-26!57;UBERON:0006241!2.36e-26!57;UBERON:0007135!2.36e-26!57;UBERON:0002616!3.03e-24!59;UBERON:0001017!3.77e-22!82;UBERON:0000955!3.93e-22!69;UBERON:0006238!3.93e-22!69;UBERON:0005743!1.30e-21!86;UBERON:0003080!1.61e-21!42;UBERON:0002346!1.72e-21!90;UBERON:0002780!2.41e-21!41;UBERON:0001890!2.41e-21!41;UBERON:0006240!2.41e-21!41;UBERON:0000073!3.63e-21!94;UBERON:0001016!3.63e-21!94;UBERON:0003075!1.20e-20!86;UBERON:0007284!1.20e-20!86;UBERON:0001893!8.21e-19!34;UBERON:0002020!1.18e-18!34;UBERON:0003528!1.18e-18!34;UBERON:0002791!3.98e-18!33;UBERON:0001869!4.16e-18!32;UBERON:0000475!1.02e-17!365;UBERON:0000477!5.00e-17!286;UBERON:0002619!4.02e-16!22;UBERON:0003056!7.40e-16!61;UBERON:0000956!1.33e-15!25;UBERON:0000203!1.33e-15!25;UBERON:0000481!1.73e-15!347;UBERON:0000025!2.32e-15!194;UBERON:0001950!5.81e-15!20;UBERON:0000033!3.23e-14!123;UBERON:0004111!6.83e-14!241;UBERON:0000153!1.20e-13!129;UBERON:0007811!1.20e-13!129;UBERON:0000483!1.36e-13!309;UBERON:0000119!2.31e-13!312;UBERON:0000468!3.04e-13!659;UBERON:0000924!7.52e-13!173;UBERON:0006601!7.52e-13!173;UBERON:0004121!4.02e-12!169;UBERON:0000467!3.93e-10!625;UBERON:0000480!6.51e-10!626;UBERON:0000479!9.23e-09!787;UBERON:0002050!1.56e-08!605;UBERON:0005423!1.56e-08!605;UBERON:0000923!2.67e-08!604;UBERON:0005291!2.67e-08!604;UBERON:0006598!2.67e-08!604;UBERON:0002532!2.67e-08!604;UBERON:0000064!3.04e-08!219;UBERON:0000922!3.06e-08!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.77e-17;32!UBERON:0001893;2.68e-17;34!UBERON:0002791;3.52e-17;32!UBERON:0002619;3.96e-17;22!UBERON:0003528;3.99e-17;34!UBERON:0002020;3.99e-17;34!UBERON:0000956;1.33e-16;25!UBERON:0000203;1.33e-16;25!UBERON:0002780;1.97e-16;41!UBERON:0001890;1.97e-16;41!UBERON:0001950;6.92e-16;20!UBERON:0000073;4.77e-15;53!UBERON:0002616;4.77e-15;53!UBERON:0007023;3.28e-10;114!UBERON:0001017;9.35e-10;75!UBERON:0000955;1.05e-09;68!UBERON:0001016;9.15e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.70e-35,114;UBERON:0001049,7.57e-28,56;UBERON:0005068,7.57e-28,56;UBERON:0006241,7.57e-28,56;UBERON:0007135,7.57e-28,56;UBERON:0000073,2.19e-26,53;UBERON:0002616,2.19e-26,53;UBERON:0002780,1.05e-22,41;UBERON:0001890,1.05e-22,41;UBERON:0003080,1.05e-22,41;UBERON:0006240,1.05e-22,41;UBERON:0002346,1.91e-22,86;UBERON:0000955,8.26e-22,68;UBERON:0006238,8.26e-22,68;UBERON:0003075,1.50e-21,82;UBERON:0007284,1.50e-21,82;UBERON:0001017,8.19e-21,81;UBERON:0001893,5.38e-20,34;UBERON:0001016,7.80e-20,89;UBERON:0003528,7.94e-20,34;UBERON:0002020,7.94e-20,34;UBERON:0001869,3.05e-19,32;UBERON:0010314,3.78e-19,132;UBERON:0002791,6.33e-19,32;UBERON:0002619,4.03e-17,22;UBERON:0000956,1.45e-16,25;UBERON:0000203,1.45e-16,25;UBERON:0003056,4.86e-16,61;UBERON:0001950,7.01e-16,20;UBERON:0010371,5.72e-15,104;UBERON:0000025,9.30e-15,192;UBERON:0004111,2.99e-13,240;UBERON:0004121,6.54e-13,171;UBERON:0000924,6.54e-13,171;UBERON:0006601,6.54e-13,171;UBERON:0000483,7.29e-13,306;UBERON:0000119,2.34e-12,309;UBERON:0011216,1.18e-11,223;UBERON:0000479,1.22e-10,773;UBERON:0000923,1.49e-08,560;UBERON:0010316,1.49e-08,560;UBERON:0005291,1.49e-08,560;UBERON:0006598,1.49e-08,560;UBERON:0010317,1.49e-08,560;UBERON:0002532,1.49e-08,560;UBERON:0002050,2.64e-08,564;UBERON:0005423,2.15e-07,581;UBERON:0000922,9.26e-07,592 | |||
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| ||
|short_description=p1@NEGR1 | |||
}} | }} |
Latest revision as of 04:39, 19 September 2015
Short description: | p1@NEGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEGR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000434200_5end |
EntrezGene: | NEGR1 |
HGNC: | 17302 |
UniProt: | B4DI94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.49e-08 | 76 |