FFCP PHASE1:Hg19::chr1:76081668..76081718,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:76081668..76081718,-
|short_description=p2@SLC44A5
|description=CAGE_peak_2_at_SLC44A5_5end
|association_with_transcript=0bp_to_uc010ora.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=204962 | |EntrezGene=204962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28524 | |HGNC=28524 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ora.1_5end | |||
|cluster_id=chr1:76081668..76081718,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_SLC44A5_5end | |||
|id=chr1:76081668..76081718,- | |||
|ontology_enrichment_celltype=CL:0002139!5.32e-10!24;CL:0002319!6.00e-08!25;CL:1000413!1.39e-07!9;CL:0000071!8.59e-07!18;CL:0002546!8.59e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.94e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.08e-09;6!DOID:171;1.76e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.34e-09,6;DOID:171,2.07e-07,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;2.11e-43;25!UBERON:0000203;2.11e-43;25!UBERON:0002619;2.86e-42;22!UBERON:0001869;1.89e-40;32!UBERON:0001950;2.05e-38;20!UBERON:0003528;2.38e-38;34!UBERON:0002020;2.38e-38;34!UBERON:0002791;5.69e-37;32!UBERON:0001893;1.80e-36;34!UBERON:0002780;1.67e-29;41!UBERON:0001890;1.67e-29;41!UBERON:0000073;9.47e-25;53!UBERON:0002616;9.47e-25;53!UBERON:0001016;1.24e-18;83!UBERON:0001017;1.65e-17;75!UBERON:0000955;3.68e-16;68!UBERON:0001871;2.05e-14;6!UBERON:0002021;7.02e-12;5!UBERON:0001872;1.38e-11;5!UBERON:0000349;4.29e-10;5!UBERON:0000200;1.64e-09;6!UBERON:0002298;4.00e-08;6!UBERON:0011216;1.05e-07;132!UBERON:0000013;5.18e-07;5!UBERON:0002410;5.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.80e-52,89;UBERON:0001017,1.82e-47,81;UBERON:0001049,1.81e-46,56;UBERON:0005068,1.81e-46,56;UBERON:0006241,1.81e-46,56;UBERON:0007135,1.81e-46,56;UBERON:0001869,4.47e-45,32;UBERON:0003528,1.59e-44,34;UBERON:0002020,1.59e-44,34;UBERON:0000073,4.14e-44,53;UBERON:0002616,4.14e-44,53;UBERON:0000956,1.58e-43,25;UBERON:0000203,1.58e-43,25;UBERON:0002619,1.79e-42,22;UBERON:0001893,5.45e-42,34;UBERON:0002780,1.55e-41,41;UBERON:0001890,1.55e-41,41;UBERON:0003080,1.55e-41,41;UBERON:0006240,1.55e-41,41;UBERON:0002791,1.61e-41,32;UBERON:0000955,2.49e-40,68;UBERON:0006238,2.49e-40,68;UBERON:0001950,1.20e-38,20;UBERON:0003075,1.63e-37,82;UBERON:0007284,1.63e-37,82;UBERON:0002346,2.60e-37,86;UBERON:0003056,3.43e-35,61;UBERON:0010371,6.07e-27,104;UBERON:0004121,4.73e-25,171;UBERON:0000924,4.73e-25,171;UBERON:0006601,4.73e-25,171;UBERON:0010314,1.58e-24,132;UBERON:0011216,3.22e-21,223;UBERON:0000025,4.23e-21,192;UBERON:0004111,2.46e-16,240;UBERON:0001871,1.28e-14,6;UBERON:0007023,5.85e-13,114;UBERON:0000483,1.33e-12,306;UBERON:0000119,2.53e-12,309;UBERON:0002021,6.22e-12,5;UBERON:0001872,1.46e-11,5;UBERON:0000349,2.46e-10,5;UBERON:0000200,1.44e-09,6;UBERON:0002298,4.96e-08,6;UBERON:0003076,3.27e-07,15;UBERON:0003057,3.27e-07,15;UBERON:0005423,4.59e-07,581;UBERON:0000922,4.97e-07,592;UBERON:0000013,6.43e-07,5;UBERON:0002410,6.43e-07,5 | |||
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| ||
|short_description=p2@SLC44A5 | |||
}} | }} |
Latest revision as of 05:50, 19 September 2015
Short description: | p2@SLC44A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC44A5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_uc010ora.1_5end |
EntrezGene: | SLC44A5 |
HGNC: | 28524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.34e-09 | 6 |
neuroectodermal tumor | 2.07e-07 | 10 |