FFCP PHASE1:Hg19::chr19:5244491..5244502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:5244491..5244502,- | |||
|description=CAGE_peak_at_chr19:5244491..5244502,- | |description=CAGE_peak_at_chr19:5244491..5244502,- | ||
|id=chr19:5244491..5244502,- | |id=chr19:5244491..5244502,- | ||
|ontology_enrichment_celltype=CL:0000540!1.51e-07!6;CL:0000031!1.51e-07!6;CL:0000404!1.51e-07!6;CL:0000047!6.53e-07!8 | |ontology_enrichment_celltype=CL:0000540!1.51e-07!6;CL:0000031!1.51e-07!6;CL:0000404!1.51e-07!6;CL:0000047!6.53e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.63e-25;6!CL:0000404;2.63e-25;6!CL:0002591;8.01e-18;1!CL:0002521;8.38e-07;3 | |ontology_enrichment_celltype_v019=CL:0000540;2.63e-25;6!CL:0000404;2.63e-25;6!CL:0002591;8.01e-18;1!CL:0002521;8.38e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-25,6;CL:0000031,1.67e-25,6;CL:0000404,1.67e-25,6;CL:0000047,2.57e-19,8;CL:0002591,1.03e-17,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.63e-25;6 | |ontology_enrichment_development_v019=CL:0000031;2.63e-25;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.30e-12!82;UBERON:0005743!3.23e-11!86;UBERON:0000073!4.76e-10!94;UBERON:0001016!4.76e-10!94;UBERON:0001049!5.37e-09!57;UBERON:0005068!5.37e-09!57;UBERON:0006241!5.37e-09!57;UBERON:0007135!5.37e-09!57;UBERON:0007023!6.33e-09!115;UBERON:0000955!3.08e-08!69;UBERON:0006238!3.08e-08!69;UBERON:0000924!8.22e-08!173;UBERON:0006601!8.22e-08!173;UBERON:0002616!1.37e-07!59;UBERON:0004121!2.49e-07!169 | |ontology_enrichment_uberon=UBERON:0001017!8.30e-12!82;UBERON:0005743!3.23e-11!86;UBERON:0000073!4.76e-10!94;UBERON:0001016!4.76e-10!94;UBERON:0001049!5.37e-09!57;UBERON:0005068!5.37e-09!57;UBERON:0006241!5.37e-09!57;UBERON:0007135!5.37e-09!57;UBERON:0007023!6.33e-09!115;UBERON:0000955!3.08e-08!69;UBERON:0006238!3.08e-08!69;UBERON:0000924!8.22e-08!173;UBERON:0006601!8.22e-08!173;UBERON:0002616!1.37e-07!59;UBERON:0004121!2.49e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;8.32e-10;2!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2!UBERON:0002190;8.38e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002771;8.32e-10;2!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2!UBERON:0002190;8.38e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,7.98e-10,2;UBERON:0000078,1.57e-09,2;UBERON:0007497,1.57e-09,2;UBERON:0003643,1.57e-09,2;UBERON:0003504,1.57e-09,2;UBERON:0003469,1.57e-09,2;UBERON:0003496,1.57e-09,2;UBERON:0002012,1.57e-09,2;UBERON:0008886,1.57e-09,2;UBERON:0007303,1.57e-09,2;UBERON:0002061,1.57e-09,2;UBERON:0005432,1.57e-09,2;UBERON:0004363,1.57e-09,2;UBERON:0001017,4.80e-07,81;UBERON:0004145,9.12e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,1.04474251279935,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.684372125364421,0.125542639594803,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.724232594804119,0,0,0,0.665188192387692,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0.900273288253207,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0.487894824518382,0.132529768321485,0.464775771478074,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.335032530668698,1.91381625495949,0,0,0,0.12269149171914,0,0,0.623912584592421,1.07057393278297,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0,0.355123450626254,0.164254312027618,0,0,0.362578348774867,0.200506470303285,0,0,0.728364672026868,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0,0,0,0,0,0,0.614014698904518,0,0,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0.0874599999961957,2.17499872630438,0.1137934482855,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.995213339381022,0.295547618953547,0,0,0,0.461701551022782,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0.176512253383001,0.677942222341597,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.681017030557878,0.321506296930038,0.550157746388935,1.66176135211674,0,0,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0.453248366080503,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,2.68457782784319,0.250381861413,0,0.443716206147409,0,0.276697269872462,0,0,0.285465333544967,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0.302461847526478,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.637724760305049,0.495743057036009,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,1.76450187355203,0.207471757392654,0,0,0.0981477185010256,0.11796972334774,0,0,0.381382095467167,0,0.596748666348824,0.150420656698515,0.40341013740704,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0.111231401892069,0.235479278551542,0.628462359664008,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0,0.233939463462106,0.994753875806841,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0,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| ||
|short_description=p@chr19:5244491..5244502,- | |short_description=p@chr19:5244491..5244502,- | ||
}} | }} |
Latest revision as of 16:50, 27 July 2015
Short description: | p@chr19:5244491..5244502, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5244491..5244502, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.67e-25 | 6 |
neuroblast | 1.67e-25 | 6 |
electrically signaling cell | 1.67e-25 | 6 |
neuronal stem cell | 2.57e-19 | 8 |
smooth muscle cell of the pulmonary artery | 1.03e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 7.98e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.57e-09 | 2 |
developing epithelial placode | 1.57e-09 | 2 |
respiratory system arterial blood vessel | 1.57e-09 | 2 |
respiratory system blood vessel | 1.57e-09 | 2 |
respiratory system artery | 1.57e-09 | 2 |
head blood vessel | 1.57e-09 | 2 |
pulmonary artery | 1.57e-09 | 2 |
pulmonary vascular system | 1.57e-09 | 2 |
pharyngeal vasculature | 1.57e-09 | 2 |
truncus arteriosus | 1.57e-09 | 2 |
aortic sac | 1.57e-09 | 2 |
pharyngeal arch artery | 1.57e-09 | 2 |
central nervous system | 4.80e-07 | 81 |
outflow tract | 9.12e-07 | 3 |