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FFCP PHASE1:Hg19::chr22:31495739..31495756,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6525
|EntrezGene=6525
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=11126
|HGNC=11126
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=91bp_to_ENST00000472911_5end
|association_with_transcript=91bp_to_ENST00000472911_5end
|cluster_id=chr22:31495739..31495756,+
|coexpression_cluster_id=C117
|coexpression_cluster_id=C117
|description=CAGE_peak_33_at_SMTN_5end
|description=CAGE_peak_33_at_SMTN_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002602!1.76e-07!2;CL:0002589!9.71e-07!2
|ontology_enrichment_celltype=CL:0002602!1.76e-07!2;CL:0002589!9.71e-07!2
|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2!CL:0002569;9.07e-18;6
|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2!CL:0002569;9.07e-18;6
|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2;CL:0002569,9.07e-18,6
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14
|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14
|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:2394,1.86e-08,14
|ontology_enrichment_uberon=UBERON:0007023!4.62e-10!115;UBERON:0009568!1.76e-07!2;UBERON:0002216!1.76e-07!2;UBERON:0002209!1.76e-07!2;UBERON:0002213!1.76e-07!2;UBERON:0004267!1.76e-07!2;UBERON:0006444!1.76e-07!2;UBERON:0001995!1.76e-07!2;UBERON:0004715!1.76e-07!2;UBERON:0001468!1.76e-07!2;UBERON:0001130!1.76e-07!2;UBERON:0001066!1.76e-07!2;UBERON:0001529!9.71e-07!2;UBERON:0007204!9.71e-07!2
|ontology_enrichment_uberon=UBERON:0007023!4.62e-10!115;UBERON:0009568!1.76e-07!2;UBERON:0002216!1.76e-07!2;UBERON:0002209!1.76e-07!2;UBERON:0002213!1.76e-07!2;UBERON:0004267!1.76e-07!2;UBERON:0006444!1.76e-07!2;UBERON:0001995!1.76e-07!2;UBERON:0004715!1.76e-07!2;UBERON:0001468!1.76e-07!2;UBERON:0001130!1.76e-07!2;UBERON:0001066!1.76e-07!2;UBERON:0001529!9.71e-07!2;UBERON:0007204!9.71e-07!2
|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0004909;2.74e-50;2!UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0000992;5.28e-09;13
|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0004909;2.74e-50;2!UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0000992;5.28e-09;13
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0003422,9.07e-18,6;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0000992,5.28e-09,13
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.618831764800233,0.662794751455832,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.387956065953678,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,6.71132590786754,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0,0
|short_description=p33@SMTN
|short_description=p33@SMTN
}}
}}

Latest revision as of 19:27, 19 September 2015

Short description:p33@SMTN
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_33_at_SMTN_5end
Coexpression cluster:C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal
Association with transcript: 91bp_to_ENST00000472911_5end
EntrezGene:SMTN
HGNC: 11126
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data