FFCP PHASE1:Hg19::chr22:31495739..31495756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |EntrezGene=6525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11126 | |HGNC=11126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=91bp_to_ENST00000472911_5end | |association_with_transcript=91bp_to_ENST00000472911_5end | ||
|cluster_id=chr22:31495739..31495756,+ | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_33_at_SMTN_5end | |description=CAGE_peak_33_at_SMTN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002602!1.76e-07!2;CL:0002589!9.71e-07!2 | |ontology_enrichment_celltype=CL:0002602!1.76e-07!2;CL:0002589!9.71e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2!CL:0002569;9.07e-18;6 | |ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2!CL:0002569;9.07e-18;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2;CL:0002569,9.07e-18,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:2394,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-10!115;UBERON:0009568!1.76e-07!2;UBERON:0002216!1.76e-07!2;UBERON:0002209!1.76e-07!2;UBERON:0002213!1.76e-07!2;UBERON:0004267!1.76e-07!2;UBERON:0006444!1.76e-07!2;UBERON:0001995!1.76e-07!2;UBERON:0004715!1.76e-07!2;UBERON:0001468!1.76e-07!2;UBERON:0001130!1.76e-07!2;UBERON:0001066!1.76e-07!2;UBERON:0001529!9.71e-07!2;UBERON:0007204!9.71e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!4.62e-10!115;UBERON:0009568!1.76e-07!2;UBERON:0002216!1.76e-07!2;UBERON:0002209!1.76e-07!2;UBERON:0002213!1.76e-07!2;UBERON:0004267!1.76e-07!2;UBERON:0006444!1.76e-07!2;UBERON:0001995!1.76e-07!2;UBERON:0004715!1.76e-07!2;UBERON:0001468!1.76e-07!2;UBERON:0001130!1.76e-07!2;UBERON:0001066!1.76e-07!2;UBERON:0001529!9.71e-07!2;UBERON:0007204!9.71e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0004909;2.74e-50;2!UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0000992;5.28e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0004909;2.74e-50;2!UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0000992;5.28e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0003422,9.07e-18,6;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0000992,5.28e-09,13 | |||
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| ||
|short_description=p33@SMTN | |short_description=p33@SMTN | ||
}} | }} |
Latest revision as of 19:27, 19 September 2015
Short description: | p33@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SMTN_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 91bp_to_ENST00000472911_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data