FFCP PHASE1:Hg19::chr9:100700439..100700486,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55363 | |EntrezGene=55363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17509 | |HGNC=17509 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXL5 | |UniProt=Q9BXL5 | ||
|association_with_transcript=39bp_to_NM_197978,uc004axy.2_5end | |association_with_transcript=39bp_to_NM_197978,uc004axy.2_5end | ||
|cluster_id=chr9:100700439..100700486,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_HEMGN_5end | |description=CAGE_peak_1_at_HEMGN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000037!1.50e-15!172;CL:0000566!1.50e-15!172;CL:0000988!1.73e-13!182;CL:0002032!1.91e-13!165;CL:0000837!1.91e-13!165;CL:0000763!4.63e-11!112;CL:0000049!4.63e-11!112;CL:0000738!3.50e-07!140 | |ontology_enrichment_celltype=CL:0000037!1.50e-15!172;CL:0000566!1.50e-15!172;CL:0000988!1.73e-13!182;CL:0002032!1.91e-13!165;CL:0000837!1.91e-13!165;CL:0000763!4.63e-11!112;CL:0000049!4.63e-11!112;CL:0000738!3.50e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.55e-07;3 | |ontology_enrichment_celltype_v019=CL:0000775;3.55e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.86e-10,168;CL:0000763,2.03e-09,108;CL:0000049,2.03e-09,108;CL:0000988,4.24e-09,177;CL:0002032,3.16e-08,161;CL:0000837,3.16e-08,161;CL:0000775,3.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.96e-10;7 | |ontology_enrichment_development_v019=UBERON:0004872;4.96e-10;7 | ||
|ontology_enrichment_disease=DOID:1036!5.39e-08!8;DOID:8692!8.08e-08!31;DOID:1240!1.23e-07!39 | |ontology_enrichment_disease=DOID:1036!5.39e-08!8;DOID:8692!8.08e-08!31;DOID:1240!1.23e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.79e-15;31!DOID:1036;2.82e-13;8!DOID:1240;1.58e-11;39!DOID:2531;1.18e-08;51!DOID:0060083;1.18e-08;51 | |ontology_enrichment_disease_v019=DOID:8692;2.79e-15;31!DOID:1036;2.82e-13;8!DOID:1240;1.58e-11;39!DOID:2531;1.18e-08;51!DOID:0060083;1.18e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,1.25e-15,31;DOID:1240,1.19e-14,39;DOID:1036,2.80e-13,8;DOID:2531,2.78e-11,51;DOID:0060083,2.78e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-35!115;UBERON:0000178!3.87e-11!15;UBERON:0000179!3.87e-11!15;UBERON:0000463!3.87e-11!15;UBERON:0001049!1.23e-09!57;UBERON:0005068!1.23e-09!57;UBERON:0006241!1.23e-09!57;UBERON:0007135!1.23e-09!57;UBERON:0002390!9.30e-08!102;UBERON:0003061!9.30e-08!102;UBERON:0002193!5.84e-07!112;UBERON:0003076!7.28e-07!15;UBERON:0003057!7.28e-07!15;UBERON:0002616!9.09e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!2.09e-35!115;UBERON:0000178!3.87e-11!15;UBERON:0000179!3.87e-11!15;UBERON:0000463!3.87e-11!15;UBERON:0001049!1.23e-09!57;UBERON:0005068!1.23e-09!57;UBERON:0006241!1.23e-09!57;UBERON:0007135!1.23e-09!57;UBERON:0002390!9.30e-08!102;UBERON:0003061!9.30e-08!102;UBERON:0002193!5.84e-07!112;UBERON:0003076!7.28e-07!15;UBERON:0003057!7.28e-07!15;UBERON:0002616!9.09e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-19;15!UBERON:0000179;2.01e-19;15!UBERON:0000463;2.01e-19;15!UBERON:0002390;3.03e-16;32!UBERON:0000922;7.16e-10;49!UBERON:0002193;2.61e-08;42!UBERON:0004177;6.10e-07;5!UBERON:0005057;6.10e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-19;15!UBERON:0000179;2.01e-19;15!UBERON:0000463;2.01e-19;15!UBERON:0002390;3.03e-16;32!UBERON:0000922;7.16e-10;49!UBERON:0002193;2.61e-08;42!UBERON:0004177;6.10e-07;5!UBERON:0005057;6.10e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-19,15;UBERON:0000179,1.71e-19,15;UBERON:0000463,1.71e-19,15;UBERON:0007023,1.43e-09,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.154816123316076,0,0,0,9.06366246789529,0.142169232487422,23.4880351467878,0.553995408531877,0,0,0.895661896959697,0.32389366601898,0.515151135268373,0.290796477559129,0,0,0.697287110717054,0,0,0.28769239232215,0.256160706529101,0.47296445977717,1.37898272294647,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,1.53041946185451,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,0,0,1.00499466102697,0.521482918420201,0.217188844705117,1.81619850790011,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0,0,4.02326707968138,0.661044872784862,1.90810750907073,0.569212969109448,1.17447437874188,0,26.4342657158052,5.60508562981536,17.11996551038,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0,0.95569624297229,0,0.950452044448374,0,0.511946444617674,0,0.473554504088034,1.64225599384209,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0,0,8.23907726341901,17.9496875522415,15.7477895105693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,1.94142780736755,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1784.55613602126,1260.64174484207,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94366107379402,0,0,0,0,1269.12647068966,1179.83521062069,1438.35914761476,1329.095075279,1105.74179005569,855.984770774387,1051.44120830261,1430.00469285857,0,0,0,0,0,2.70339004723974,0.318852545457645,2.59453182862662,6.70268795463284,7.19690181261202,0,5.33514638415572,0,0,2.50634477090067,3.38583555603207,0,0,0,0,0,0,0,0,29.7894606067909,23.3866058000653,27.5864792045503,47.6292914236883,0,0,0.586032717087576,0,0,0,0.47748896947538,0,0.614321404198464,0,0.422008249231538,0,0,0,3.58646378851925,1.10513566212459,0,0,0,0,0,0,0,1.87422470710174,469.386861000002,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,0.110579259931225,0.295547618953547,2.85201016300164,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,11.241262801531,0,1.82832850090172,183.634867742385,232.138040632204,174.870093628828,169.260329589973,13.9864189502733,0,0,0,0,0,0.265372693510018,5.49927130440263,0,0,0,0.202203398942031,7.2231988256891,0,0,0,0,0,0,7.95789180239274,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,2.71176888936639,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,2.55493176133945,0,0,3.6306712165393,0,2.87149209830726,0.399358000997982,0,1.78537165953498,22.6408302280268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,3.61936658131487,0,0,0,0,0,0,0,0,0,0,14.037821048137,0,0,1.02586563574658,29.1515155606887,0.517131825446202,0.79339561045614,0,0,8.86335524311866,98.8815079076899,2.48543433208317,0.496166021811951,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,2.29363678276028,0.776503360757966,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,3.28184885410932,0,1.98484471355718,0,0,0.535701835878287,0,0,0,21.2885688390333,0.115233987555779,0,0.40781839786099,0.0657727735628491,0,0,0.39246546425257,0.157115589916002,0,4.56579360254748,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,8.11870101936739,16.5141737640107,0,0,0,0,0,0,0,0.874238242015829,0,0.245148321753905,0,0.785233868459781,0.594092800654172,8.0304588240846,0,1.50374268767766,25.2030341976687,0,0,0,0,3.65168194123259,0,0.143339583151451,0,0.0679914901909147,8.72701380680755,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0,0.20686599172379,20.4704622624942,21.6638632632004,16.7285276475256,13.0356900021302,0,0.445530107947154,5.05292972395548,0.653150243690884,3.42233301085281,0.134704106029175,0.78894425931944,20.9576024623988,0,0,0,0,18.7712753922763,0,7.73102738799903,8.65483806441166,1.40891655513718,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.154816123316076,0,0,0,9.06366246789529,0.142169232487422,23.4880351467878,0.553995408531877,0,0,0.895661896959697,0.32389366601898,0.515151135268373,0.290796477559129,0,0,0.697287110717054,0,0,0.28769239232215,0.256160706529101,0.47296445977717,1.37898272294647,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,1.53041946185451,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,0,0,1.00499466102697,0.521482918420201,0.217188844705117,1.81619850790011,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0,0,4.02326707968138,0.661044872784862,1.90810750907073,0.569212969109448,1.17447437874188,0,26.4342657158052,5.60508562981536,17.11996551038,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0,0.95569624297229,0,0.950452044448374,0,0.511946444617674,0,0.473554504088034,1.64225599384209,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0.773288812777695,0,0,8.23907726341901,17.9496875522415,15.7477895105693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,1.94142780736755,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1784.55613602126,1260.64174484207,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94366107379402,0,0,0,0,1269.12647068966,1179.83521062069,1438.35914761476,1329.095075279,1105.74179005569,855.984770774387,1051.44120830261,1430.00469285857,0,0,0,0,0,2.70339004723974,0.318852545457645,2.59453182862662,6.70268795463284,7.19690181261202,0,5.33514638415572,0,0,2.50634477090067,3.38583555603207,0,0,0,0,0,0,0,0,29.7894606067909,23.3866058000653,27.5864792045503,47.6292914236883,0,0,0.586032717087576,0,0,0,0.47748896947538,0,0.614321404198464,0,0.422008249231538,0,0,0,3.58646378851925,1.10513566212459,0,0,0,0,0,0,0,1.87422470710174,469.386861000002,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,0.110579259931225,0.295547618953547,2.85201016300164,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,11.241262801531,0,1.82832850090172,183.634867742385,232.138040632204,174.870093628828,169.260329589973,13.9864189502733,0,0,0,0,0,0.265372693510018,5.49927130440263,0,0,0,0.202203398942031,7.2231988256891,0,0,0,0,0,0,7.95789180239274,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,2.71176888936639,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,2.55493176133945,0,0,3.6306712165393,0,2.87149209830726,0.399358000997982,0,1.78537165953498,22.6408302280268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,3.61936658131487,0,0,0,0,0,0,0,0,0,0,14.037821048137,0,0,1.02586563574658,29.1515155606887,0.517131825446202,0.79339561045614,0,0,8.86335524311866,98.8815079076899,2.48543433208317,0.496166021811951,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,2.29363678276028,0.776503360757966,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,3.28184885410932,0,1.98484471355718,0,0,0.535701835878287,0,0,0,21.2885688390333,0.115233987555779,0,0.40781839786099,0.0657727735628491,0,0,0.39246546425257,0.157115589916002,0,4.56579360254748,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,8.11870101936739,16.5141737640107,0,0,0,0,0,0,0,0.874238242015829,0,0.245148321753905,0,0.785233868459781,0.594092800654172,8.0304588240846,0,1.50374268767766,25.2030341976687,0,0,0,0,3.65168194123259,0,0.143339583151451,0,0.0679914901909147,8.72701380680755,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0,0.20686599172379,20.4704622624942,21.6638632632004,16.7285276475256,13.0356900021302,0,0.445530107947154,5.05292972395548,0.653150243690884,3.42233301085281,0.134704106029175,0.78894425931944,20.9576024623988,0,0,0,0,18.7712753922763,0,7.73102738799903,8.65483806441166,1.40891655513718,0 | ||
|short_description=p1@HEMGN | |short_description=p1@HEMGN | ||
}} | }} |
Latest revision as of 18:07, 19 September 2015
Short description: | p1@HEMGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HEMGN_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 39bp_to_NM_197978, uc004axy.2_5end |
EntrezGene: | HEMGN |
HGNC: | 17509 |
UniProt: | Q9BXL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.86e-10 | 168 |
myeloid cell | 2.03e-09 | 108 |
common myeloid progenitor | 2.03e-09 | 108 |
hematopoietic cell | 4.24e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.16e-08 | 161 |
neutrophil | 3.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.71e-19 | 15 |
haemolymphatic fluid | 1.71e-19 | 15 |
organism substance | 1.71e-19 | 15 |
adult organism | 1.43e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.25e-15 | 31 |
leukemia | 1.19e-14 | 39 |
chronic leukemia | 2.80e-13 | 8 |
hematologic cancer | 2.78e-11 | 51 |
immune system cancer | 2.78e-11 | 51 |