FFCP PHASE1:Hg19::chr11:121323670..121323687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000501964,uc001pxw.1_5end | |association_with_transcript=34bp_to_ENST00000501964,uc001pxw.1_5end | ||
|cluster_id=chr11:121323670..121323687,- | |||
|coexpression_cluster_id=C1134 | |coexpression_cluster_id=C1134 | ||
|description=CAGE_peak_1_at_ENST00000501964_5end,CAGE_peak_1_at_uc001pxw.1_5end | |description=CAGE_peak_1_at_ENST00000501964_5end,CAGE_peak_1_at_uc001pxw.1_5end | ||
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|ontology_enrichment_celltype=CL:0000838!3.69e-39!52;CL:0000542!3.80e-38!53;CL:0000051!3.80e-38!53;CL:0000738!1.14e-34!140;CL:0002087!7.99e-32!119;CL:0002031!6.21e-26!124;CL:0000037!4.65e-25!172;CL:0000566!4.65e-25!172;CL:0002032!1.03e-22!165;CL:0000837!1.03e-22!165;CL:0000988!1.68e-22!182;CL:0000945!6.10e-22!24;CL:0000826!6.10e-22!24;CL:0000791!2.67e-17!18;CL:0000789!2.67e-17!18;CL:0002420!2.67e-17!18;CL:0002419!2.67e-17!18;CL:0000790!2.67e-17!18;CL:0000084!2.03e-14!25;CL:0000827!2.03e-14!25;CL:0000236!6.31e-12!14;CL:0000625!7.90e-11!11;CL:0000094!7.51e-10!8;CL:0000624!1.28e-09!6;CL:0000081!9.80e-07!11 | |ontology_enrichment_celltype=CL:0000838!3.69e-39!52;CL:0000542!3.80e-38!53;CL:0000051!3.80e-38!53;CL:0000738!1.14e-34!140;CL:0002087!7.99e-32!119;CL:0002031!6.21e-26!124;CL:0000037!4.65e-25!172;CL:0000566!4.65e-25!172;CL:0002032!1.03e-22!165;CL:0000837!1.03e-22!165;CL:0000988!1.68e-22!182;CL:0000945!6.10e-22!24;CL:0000826!6.10e-22!24;CL:0000791!2.67e-17!18;CL:0000789!2.67e-17!18;CL:0002420!2.67e-17!18;CL:0002419!2.67e-17!18;CL:0000790!2.67e-17!18;CL:0000084!2.03e-14!25;CL:0000827!2.03e-14!25;CL:0000236!6.31e-12!14;CL:0000625!7.90e-11!11;CL:0000094!7.51e-10!8;CL:0000624!1.28e-09!6;CL:0000081!9.80e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.09e-20;53!CL:0000791;4.85e-17;18!CL:0000789;4.85e-17;18!CL:0002419;4.85e-17;18!CL:0000775;5.53e-17;3!CL:0000623;9.41e-17;3!CL:0000094;1.08e-16;8!CL:0000945;2.38e-16;24!CL:0000084;4.81e-15;25!CL:0000081;4.51e-12;11!CL:0000625;2.25e-11;11!CL:0000624;2.07e-08;6!CL:0000226;7.50e-08;3!CL:0000898;7.50e-08;3!CL:0000842;7.50e-08;3!CL:0002087;1.43e-07;104!CL:0000738;3.14e-07;136 | |ontology_enrichment_celltype_v019=CL:0000542;1.09e-20;53!CL:0000791;4.85e-17;18!CL:0000789;4.85e-17;18!CL:0002419;4.85e-17;18!CL:0000775;5.53e-17;3!CL:0000623;9.41e-17;3!CL:0000094;1.08e-16;8!CL:0000945;2.38e-16;24!CL:0000084;4.81e-15;25!CL:0000081;4.51e-12;11!CL:0000625;2.25e-11;11!CL:0000624;2.07e-08;6!CL:0000226;7.50e-08;3!CL:0000898;7.50e-08;3!CL:0000842;7.50e-08;3!CL:0002087;1.43e-07;104!CL:0000738;3.14e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.18e-39,52;CL:0000542,8.13e-39,53;CL:0000051,8.13e-39,53;CL:0000738,2.31e-30,136;CL:0000037,2.16e-23,168;CL:0002087,1.52e-22,115;CL:0000988,6.99e-22,177;CL:0002032,1.90e-19,161;CL:0000837,1.90e-19,161;CL:0002031,1.08e-17,120;CL:0000775,5.55e-17,3;CL:0000791,5.74e-17,18;CL:0000789,5.74e-17,18;CL:0002420,5.74e-17,18;CL:0002419,5.74e-17,18;CL:0000790,5.74e-17,18;CL:0000623,7.64e-17,3;CL:0000825,7.64e-17,3;CL:0000094,7.82e-17,8;CL:0000945,1.39e-16,24;CL:0000826,1.39e-16,24;CL:0000084,6.22e-15,25;CL:0000827,6.22e-15,25;CL:0000081,3.59e-12,11;CL:0000625,2.39e-11,11;CL:0000624,2.35e-08,6;CL:0000898,8.48e-08,3;CL:0000134,9.82e-08,354;CL:0000226,1.15e-07,3;CL:0000842,1.15e-07,3;CL:0002320,1.85e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.09e-20;53!CL:0000790;4.85e-17;18 | |ontology_enrichment_development_v019=CL:0000051;1.09e-20;53!CL:0000790;4.85e-17;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;7.34e-07;1!DOID:0050177;7.34e-07;1!DOID:0050427;7.34e-07;1 | |ontology_enrichment_disease_v019=DOID:630;7.34e-07;1!DOID:0050177;7.34e-07;1!DOID:0050427;7.34e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,6.59e-07,1;DOID:0050177,6.59e-07,1;DOID:0050427,6.59e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!3.73e-09!22;UBERON:0007023!3.76e-09!115;UBERON:0001869!5.00e-09!32;UBERON:0001950!5.36e-09!20;UBERON:0002780!8.16e-09!41;UBERON:0001890!8.16e-09!41;UBERON:0006240!8.16e-09!41;UBERON:0001049!1.47e-08!57;UBERON:0005068!1.47e-08!57;UBERON:0006241!1.47e-08!57;UBERON:0007135!1.47e-08!57;UBERON:0003080!1.75e-08!42;UBERON:0001893!3.02e-08!34;UBERON:0002020!3.06e-08!34;UBERON:0003528!3.06e-08!34;UBERON:0002616!4.68e-08!59;UBERON:0001017!5.22e-08!82;UBERON:0005743!7.11e-08!86;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0002791!1.22e-07!33;UBERON:0000955!4.49e-07!69;UBERON:0006238!4.49e-07!69 | |ontology_enrichment_uberon=UBERON:0002619!3.73e-09!22;UBERON:0007023!3.76e-09!115;UBERON:0001869!5.00e-09!32;UBERON:0001950!5.36e-09!20;UBERON:0002780!8.16e-09!41;UBERON:0001890!8.16e-09!41;UBERON:0006240!8.16e-09!41;UBERON:0001049!1.47e-08!57;UBERON:0005068!1.47e-08!57;UBERON:0006241!1.47e-08!57;UBERON:0007135!1.47e-08!57;UBERON:0003080!1.75e-08!42;UBERON:0001893!3.02e-08!34;UBERON:0002020!3.06e-08!34;UBERON:0003528!3.06e-08!34;UBERON:0002616!4.68e-08!59;UBERON:0001017!5.22e-08!82;UBERON:0005743!7.11e-08!86;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0002791!1.22e-07!33;UBERON:0000955!4.49e-07!69;UBERON:0006238!4.49e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.37e-07,371 | |||
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|short_description=p1@ENST00000501964,p1@uc001pxw.1 | |short_description=p1@ENST00000501964,p1@uc001pxw.1 | ||
}} | }} |
Latest revision as of 19:12, 23 July 2015
Short description: | p1@ENST00000501964, p1@uc001pxw.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000501964_5end, CAGE_peak_1_at_uc001pxw.1_5end |
Coexpression cluster: | C1134_Eosinophils_Neutrophils_CD19_CD8_Natural_CD4_Basophils |
Association with transcript: | 34bp_to_ENST00000501964, uc001pxw.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.18e-39 | 52 |
lymphocyte | 8.13e-39 | 53 |
common lymphoid progenitor | 8.13e-39 | 53 |
leukocyte | 2.31e-30 | 136 |
hematopoietic stem cell | 2.16e-23 | 168 |
nongranular leukocyte | 1.52e-22 | 115 |
hematopoietic cell | 6.99e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.90e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 1.08e-17 | 120 |
neutrophil | 5.55e-17 | 3 |
mature alpha-beta T cell | 5.74e-17 | 18 |
alpha-beta T cell | 5.74e-17 | 18 |
immature T cell | 5.74e-17 | 18 |
mature T cell | 5.74e-17 | 18 |
immature alpha-beta T cell | 5.74e-17 | 18 |
natural killer cell | 7.64e-17 | 3 |
pro-NK cell | 7.64e-17 | 3 |
granulocyte | 7.82e-17 | 8 |
lymphocyte of B lineage | 1.39e-16 | 24 |
pro-B cell | 1.39e-16 | 24 |
T cell | 6.22e-15 | 25 |
pro-T cell | 6.22e-15 | 25 |
blood cell | 3.59e-12 | 11 |
CD8-positive, alpha-beta T cell | 2.39e-11 | 11 |
CD4-positive, alpha-beta T cell | 2.35e-08 | 6 |
naive T cell | 8.48e-08 | 3 |
mesenchymal cell | 9.82e-08 | 354 |
single nucleate cell | 1.15e-07 | 3 |
mononuclear cell | 1.15e-07 | 3 |
connective tissue cell | 1.85e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.37e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.59e-07 | 1 |
monogenic disease | 6.59e-07 | 1 |
xeroderma pigmentosum | 6.59e-07 | 1 |