FFCP PHASE1:Hg19::chr10:94608218..94608241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54536 | |EntrezGene=54536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23196 | |HGNC=23196 | ||
|TSSclassifier=strong | |||
|UniProt=B1AP46,B3KXY5,Q8TAG9 | |UniProt=B1AP46,B3KXY5,Q8TAG9 | ||
|association_with_transcript=0bp_to_ENST00000371543,NM_019053,uc001kif.3,uc001kig.2,uc009xub.2,uc009xuc.2_5end | |association_with_transcript=0bp_to_ENST00000371543,NM_019053,uc001kif.3,uc001kig.2,uc009xub.2,uc009xuc.2_5end | ||
|cluster_id=chr10:94608218..94608241,+ | |||
|description=CAGE_peak_2_at_EXOC6_5end | |description=CAGE_peak_2_at_EXOC6_5end | ||
|id=chr10:94608218..94608241,+ | |id=chr10:94608218..94608241,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.41e-14!172;CL:0000566!1.41e-14!172;CL:0002032!3.75e-13!165;CL:0000837!3.75e-13!165;CL:0000988!4.24e-13!182;CL:0000738!9.70e-08!140;CL:0000838!1.06e-07!52;CL:0000542!1.33e-07!53;CL:0000051!1.33e-07!53;CL:0000236!1.75e-07!14;CL:0000945!5.56e-07!24;CL:0000826!5.56e-07!24 | |ontology_enrichment_celltype=CL:0000037!1.41e-14!172;CL:0000566!1.41e-14!172;CL:0002032!3.75e-13!165;CL:0000837!3.75e-13!165;CL:0000988!4.24e-13!182;CL:0000738!9.70e-08!140;CL:0000838!1.06e-07!52;CL:0000542!1.33e-07!53;CL:0000051!1.33e-07!53;CL:0000236!1.75e-07!14;CL:0000945!5.56e-07!24;CL:0000826!5.56e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.35e-07;24!CL:0000236;2.32e-07;13 | |ontology_enrichment_celltype_v019=CL:0000945;1.35e-07;24!CL:0000236;2.32e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.99e-14,168;CL:0000988,6.28e-13,177;CL:0002032,8.01e-13,161;CL:0000837,8.01e-13,161;CL:0000838,8.46e-08,52;CL:0000542,1.06e-07,53;CL:0000051,1.06e-07,53;CL:0000236,1.41e-07,14;CL:0000738,2.08e-07,136;CL:0000945,4.55e-07,24;CL:0000826,4.55e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.40e-10!51;DOID:0060083!1.40e-10!51;DOID:162!8.25e-10!235;DOID:14566!1.09e-09!239;DOID:1240!1.19e-09!39;DOID:0050686!1.67e-09!137;DOID:8692!3.22e-08!31 | |ontology_enrichment_disease=DOID:2531!1.40e-10!51;DOID:0060083!1.40e-10!51;DOID:162!8.25e-10!235;DOID:14566!1.09e-09!239;DOID:1240!1.19e-09!39;DOID:0050686!1.67e-09!137;DOID:8692!3.22e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.93e-08;31!DOID:1240;1.49e-07;39!DOID:2531;1.51e-07;51!DOID:0060083;1.51e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;8.93e-08;31!DOID:1240;1.49e-07;39!DOID:2531;1.51e-07;51!DOID:0060083;1.51e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.53e-11,51;DOID:0060083,7.53e-11,51;DOID:1240,8.83e-10,39;DOID:162,1.22e-09,235;DOID:14566,1.77e-09,239;DOID:0050686,3.00e-09,137;DOID:8692,2.52e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-19!115;UBERON:0001049!1.18e-13!57;UBERON:0005068!1.18e-13!57;UBERON:0006241!1.18e-13!57;UBERON:0007135!1.18e-13!57;UBERON:0003080!1.81e-13!42;UBERON:0002780!6.25e-13!41;UBERON:0001890!6.25e-13!41;UBERON:0006240!6.25e-13!41;UBERON:0000955!4.59e-12!69;UBERON:0006238!4.59e-12!69;UBERON:0001017!7.06e-12!82;UBERON:0001869!2.42e-11!32;UBERON:0000073!2.60e-11!94;UBERON:0001016!2.60e-11!94;UBERON:0002020!4.20e-11!34;UBERON:0003528!4.20e-11!34;UBERON:0005743!5.18e-11!86;UBERON:0001893!7.81e-11!34;UBERON:0002616!1.06e-10!59;UBERON:0002791!1.38e-10!33;UBERON:0002619!1.93e-10!22;UBERON:0001950!1.07e-09!20;UBERON:0000956!2.12e-09!25;UBERON:0000203!2.12e-09!25;UBERON:0002346!5.81e-09!90;UBERON:0003075!1.39e-08!86;UBERON:0007284!1.39e-08!86;UBERON:0003056!1.80e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.25e-19!115;UBERON:0001049!1.18e-13!57;UBERON:0005068!1.18e-13!57;UBERON:0006241!1.18e-13!57;UBERON:0007135!1.18e-13!57;UBERON:0003080!1.81e-13!42;UBERON:0002780!6.25e-13!41;UBERON:0001890!6.25e-13!41;UBERON:0006240!6.25e-13!41;UBERON:0000955!4.59e-12!69;UBERON:0006238!4.59e-12!69;UBERON:0001017!7.06e-12!82;UBERON:0001869!2.42e-11!32;UBERON:0000073!2.60e-11!94;UBERON:0001016!2.60e-11!94;UBERON:0002020!4.20e-11!34;UBERON:0003528!4.20e-11!34;UBERON:0005743!5.18e-11!86;UBERON:0001893!7.81e-11!34;UBERON:0002616!1.06e-10!59;UBERON:0002791!1.38e-10!33;UBERON:0002619!1.93e-10!22;UBERON:0001950!1.07e-09!20;UBERON:0000956!2.12e-09!25;UBERON:0000203!2.12e-09!25;UBERON:0002346!5.81e-09!90;UBERON:0003075!1.39e-08!86;UBERON:0007284!1.39e-08!86;UBERON:0003056!1.80e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.55e-10;22!UBERON:0001869;1.66e-10;32!UBERON:0002791;3.98e-10;32!UBERON:0003528;8.97e-10;34!UBERON:0002020;8.97e-10;34!UBERON:0001950;1.03e-09;20!UBERON:0002780;1.63e-09;41!UBERON:0001890;1.63e-09;41!UBERON:0000956;1.65e-09;25!UBERON:0000203;1.65e-09;25!UBERON:0001893;2.47e-09;34!UBERON:0000073;1.04e-07;53!UBERON:0002616;1.04e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.55e-10;22!UBERON:0001869;1.66e-10;32!UBERON:0002791;3.98e-10;32!UBERON:0003528;8.97e-10;34!UBERON:0002020;8.97e-10;34!UBERON:0001950;1.03e-09;20!UBERON:0002780;1.63e-09;41!UBERON:0001890;1.63e-09;41!UBERON:0000956;1.65e-09;25!UBERON:0000203;1.65e-09;25!UBERON:0001893;2.47e-09;34!UBERON:0000073;1.04e-07;53!UBERON:0002616;1.04e-07;53 | ||
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| ||
|short_description=p2@EXOC6 | |short_description=p2@EXOC6 | ||
}} | }} |
Latest revision as of 01:00, 20 September 2015
Short description: | p2@EXOC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EXOC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371543, NM_019053, uc001kif.3, uc001kig.2, uc009xub.2, uc009xuc.2_5end |
EntrezGene: | EXOC6 |
HGNC: | 23196 |
UniProt: | B1AP46B3KXY5Q8TAG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.99e-14 | 168 |
hematopoietic cell | 6.28e-13 | 177 |
hematopoietic oligopotent progenitor cell | 8.01e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.01e-13 | 161 |
lymphoid lineage restricted progenitor cell | 8.46e-08 | 52 |
lymphocyte | 1.06e-07 | 53 |
common lymphoid progenitor | 1.06e-07 | 53 |
B cell | 1.41e-07 | 14 |
leukocyte | 2.08e-07 | 136 |
lymphocyte of B lineage | 4.55e-07 | 24 |
pro-B cell | 4.55e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.88e-19 | 114 |
neural tube | 2.09e-13 | 56 |
neural rod | 2.09e-13 | 56 |
future spinal cord | 2.09e-13 | 56 |
neural keel | 2.09e-13 | 56 |
regional part of nervous system | 3.19e-13 | 53 |
regional part of brain | 3.19e-13 | 53 |
regional part of forebrain | 4.12e-13 | 41 |
forebrain | 4.12e-13 | 41 |
anterior neural tube | 4.12e-13 | 41 |
future forebrain | 4.12e-13 | 41 |
brain | 1.45e-11 | 68 |
future brain | 1.45e-11 | 68 |
nervous system | 1.62e-11 | 89 |
cerebral hemisphere | 1.69e-11 | 32 |
central nervous system | 2.65e-11 | 81 |
brain grey matter | 2.96e-11 | 34 |
gray matter | 2.96e-11 | 34 |
regional part of telencephalon | 3.31e-11 | 32 |
telencephalon | 5.56e-11 | 34 |
regional part of cerebral cortex | 1.39e-10 | 22 |
neocortex | 7.93e-10 | 20 |
cerebral cortex | 1.59e-09 | 25 |
pallium | 1.59e-09 | 25 |
organ system subdivision | 9.41e-09 | 223 |
neurectoderm | 1.31e-08 | 86 |
neural plate | 3.17e-08 | 82 |
presumptive neural plate | 3.17e-08 | 82 |
pre-chordal neural plate | 1.31e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.53e-11 | 51 |
immune system cancer | 7.53e-11 | 51 |
leukemia | 8.83e-10 | 39 |
cancer | 1.22e-09 | 235 |
disease of cellular proliferation | 1.77e-09 | 239 |
organ system cancer | 3.00e-09 | 137 |
myeloid leukemia | 2.52e-08 | 31 |