FFCP PHASE1:Hg19::chr20:25520974..25520986,-: Difference between revisions
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|id=chr20:25520974..25520986,-
|short_description=p6@NINL
|description=CAGE_peak_6_at_NINL_5end
|association_with_transcript=31bp_to_uc010ztf.1_5end
|EntrezGene=22...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22981 | |EntrezGene=22981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29163 | |HGNC=29163 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_uc010ztf.1_5end | |||
|cluster_id=chr20:25520974..25520986,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_NINL_5end | |||
|id=chr20:25520974..25520986,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.72e-99;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p6@NINL | |||
}} | }} |
Latest revision as of 23:05, 24 September 2015
Short description: | p6@NINL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NINL_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 31bp_to_uc010ztf.1_5end |
EntrezGene: | NINL |
HGNC: | 29163 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.55e-50 | 6 |
rhombic lip | 4.55e-50 | 6 |
regional part of metencephalon | 9.92e-34 | 9 |
metencephalon | 9.92e-34 | 9 |
future metencephalon | 9.92e-34 | 9 |
segmental subdivision of hindbrain | 1.53e-25 | 12 |
hindbrain | 1.53e-25 | 12 |
presumptive hindbrain | 1.53e-25 | 12 |
segmental subdivision of nervous system | 1.19e-23 | 13 |
posterior neural tube | 1.28e-20 | 15 |
chordal neural plate | 1.28e-20 | 15 |
dorsal plus ventral thalamus | 7.67e-18 | 2 |
thalamic complex | 7.67e-18 | 2 |
regional part of nervous system | 9.10e-16 | 53 |
regional part of brain | 9.10e-16 | 53 |
neural tube | 5.77e-15 | 56 |
neural rod | 5.77e-15 | 56 |
future spinal cord | 5.77e-15 | 56 |
neural keel | 5.77e-15 | 56 |
brain | 2.81e-12 | 68 |
future brain | 2.81e-12 | 68 |
central nervous system | 2.00e-10 | 81 |
neural plate | 2.00e-10 | 82 |
presumptive neural plate | 2.00e-10 | 82 |
neurectoderm | 5.77e-10 | 86 |
regional part of diencephalon | 1.32e-09 | 4 |
nervous system | 1.91e-09 | 89 |
ecto-epithelium | 2.53e-08 | 104 |
occipital lobe | 7.01e-08 | 5 |
adult organism | 1.08e-07 | 114 |