FFCP PHASE1:Hg19::chr11:123065895..123065906,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79827 | |EntrezGene=79827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24039 | |HGNC=24039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_ENST00000448775_5end | |association_with_transcript=82bp_to_ENST00000448775_5end | ||
|cluster_id=chr11:123065895..123065906,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_4_at_CLMP_5end | |description=CAGE_peak_4_at_CLMP_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.62e-24!180;CL:0000057!7.32e-16!75;CL:0000680!2.81e-13!57;CL:0000056!2.81e-13!57;CL:0000355!2.81e-13!57;CL:0000187!1.73e-11!54;CL:0002620!3.74e-11!23;CL:0000136!8.81e-11!15;CL:0000359!2.62e-10!32;CL:0000393!1.37e-09!60;CL:0000211!1.37e-09!60;CL:0000192!1.74e-09!42;CL:0000514!1.74e-09!42;CL:0000183!2.25e-09!59 | |ontology_enrichment_celltype=CL:0000055!2.62e-24!180;CL:0000057!7.32e-16!75;CL:0000680!2.81e-13!57;CL:0000056!2.81e-13!57;CL:0000355!2.81e-13!57;CL:0000187!1.73e-11!54;CL:0002620!3.74e-11!23;CL:0000136!8.81e-11!15;CL:0000359!2.62e-10!32;CL:0000393!1.37e-09!60;CL:0000211!1.37e-09!60;CL:0000192!1.74e-09!42;CL:0000514!1.74e-09!42;CL:0000183!2.25e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-15;13!CL:0002595;4.25e-10;5!CL:0002539;4.92e-09;10!CL:0000359;1.17e-08;32!CL:0002615;4.56e-07;3 | |ontology_enrichment_celltype_v019=CL:0000136;1.89e-15;13!CL:0002595;4.25e-10;5!CL:0002539;4.92e-09;10!CL:0000359;1.17e-08;32!CL:0002615;4.56e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.23e-18,15;CL:0002595,1.95e-10,5;CL:0002539,3.45e-09,10;CL:0000359,3.96e-09,32;CL:0000680,9.07e-09,58;CL:0000056,9.07e-09,58;CL:0000355,9.07e-09,58;CL:0000048,1.35e-08,427;CL:0000723,3.14e-08,433;CL:0000192,4.68e-08,43;CL:0000514,4.68e-08,43;CL:0000034,9.32e-08,441;CL:0002615,6.23e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.38e-16!83;UBERON:0002329!1.38e-16!83;UBERON:0003077!1.38e-16!83;UBERON:0003059!1.38e-16!83;UBERON:0007282!1.38e-16!83;UBERON:0009618!1.38e-16!83;UBERON:0007285!1.38e-16!83;UBERON:0004290!3.88e-14!70;UBERON:0000486!2.61e-12!82;UBERON:0001134!2.09e-11!61;UBERON:0002036!2.09e-11!61;UBERON:0003082!2.09e-11!61;UBERON:0002385!2.57e-11!63;UBERON:0001015!2.57e-11!63;UBERON:0000383!2.57e-11!63;UBERON:0003102!2.84e-10!95;UBERON:0004573!5.16e-10!33;UBERON:0004571!5.16e-10!33;UBERON:0002199!2.08e-08!45;UBERON:0002416!2.08e-08!45;UBERON:0001637!2.19e-08!42;UBERON:0003509!2.19e-08!42;UBERON:0004572!2.19e-08!42;UBERON:0005256!6.66e-08!143;UBERON:0002097!3.45e-07!40;UBERON:0001135!3.89e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!1.38e-16!83;UBERON:0002329!1.38e-16!83;UBERON:0003077!1.38e-16!83;UBERON:0003059!1.38e-16!83;UBERON:0007282!1.38e-16!83;UBERON:0009618!1.38e-16!83;UBERON:0007285!1.38e-16!83;UBERON:0004290!3.88e-14!70;UBERON:0000486!2.61e-12!82;UBERON:0001134!2.09e-11!61;UBERON:0002036!2.09e-11!61;UBERON:0003082!2.09e-11!61;UBERON:0002385!2.57e-11!63;UBERON:0001015!2.57e-11!63;UBERON:0000383!2.57e-11!63;UBERON:0003102!2.84e-10!95;UBERON:0004573!5.16e-10!33;UBERON:0004571!5.16e-10!33;UBERON:0002199!2.08e-08!45;UBERON:0002416!2.08e-08!45;UBERON:0001637!2.19e-08!42;UBERON:0003509!2.19e-08!42;UBERON:0004572!2.19e-08!42;UBERON:0005256!6.66e-08!143;UBERON:0002097!3.45e-07!40;UBERON:0001135!3.89e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.02e-11;33!UBERON:0004571;2.02e-11;33!UBERON:0003834;4.25e-10;5!UBERON:0001533;4.25e-10;5!UBERON:0004237;4.92e-09;10!UBERON:0004695;4.92e-09;10!UBERON:0002111;4.92e-09;10!UBERON:0004178;4.92e-09;10!UBERON:0000947;2.30e-07;21!UBERON:0010191;2.30e-07;21!UBERON:0001135;3.11e-07;15!UBERON:0003513;4.50e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.02e-11;33!UBERON:0004571;2.02e-11;33!UBERON:0003834;4.25e-10;5!UBERON:0001533;4.25e-10;5!UBERON:0004237;4.92e-09;10!UBERON:0004695;4.92e-09;10!UBERON:0002111;4.92e-09;10!UBERON:0004178;4.92e-09;10!UBERON:0000947;2.30e-07;21!UBERON:0010191;2.30e-07;21!UBERON:0001135;3.11e-07;15!UBERON:0003513;4.50e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.37e-13,33;UBERON:0004571,6.37e-13,33;UBERON:0003834,1.95e-10,5;UBERON:0001533,1.95e-10,5;UBERON:0007524,2.85e-10,73;UBERON:0002329,8.33e-10,71;UBERON:0003059,8.33e-10,71;UBERON:0007282,8.33e-10,71;UBERON:0004290,8.33e-10,71;UBERON:0009618,8.33e-10,71;UBERON:0003077,1.39e-09,72;UBERON:0007285,1.39e-09,72;UBERON:0001637,3.27e-09,42;UBERON:0003509,3.27e-09,42;UBERON:0004572,3.27e-09,42;UBERON:0004237,3.45e-09,10;UBERON:0004695,3.45e-09,10;UBERON:0002111,3.45e-09,10;UBERON:0004178,3.45e-09,10;UBERON:0000486,1.88e-08,83;UBERON:0007503,2.24e-08,78;UBERON:0001134,7.04e-08,62;UBERON:0002036,7.04e-08,62;UBERON:0003082,7.04e-08,62;UBERON:0002385,1.77e-07,64;UBERON:0001015,1.77e-07,64;UBERON:0000383,1.77e-07,64;UBERON:0003513,2.63e-07,7;UBERON:0001135,2.87e-07,15;UBERON:0000947,3.34e-07,21;UBERON:0010191,3.34e-07,21 | |||
|phase1_expression=0.726713517082227,2.14100523890983,1.26858963686374,3.00219895059391,2.23480547213644,0.872338524100369,0,1.89515962028049,3.13422753839806,0,0,0,0,0.74259811776028,2.31978163009541,1.34465029290355,1.80808358407193,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,0.722878304769133,1.50401373190767,2.17269778441236,1.5905718941022,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.662045904066094,1.14734648299525,1.06400514659507,0,0,0,0.622422070799533,0.67355336034844,0.163461903113459,0.302714855289863,0,0,2.49728061464256,1.1409436430889,0.597794722207204,0.23486899728753,0.485618833104395,0.280901613404497,1.02077085627447,0.122834317311768,0.929932030581889,2.37600571456411,1.97813543422845,0,0,0.336672227908132,0.500474079487857,0.831192346452549,0.438977620880838,0,2.10333282469236,0.113432183160021,0.89694817844431,0.85422955527427,0.847727604638247,1.20036438433761,0.515262646192195,1.28820270022815,0.558350568994769,1.68776332241266,1.46155507741798,0.504867548488229,0.828449087780694,0.969876340912871,1.77504796258307,1.81353776809752,0.847802961552438,0,0.272746120590835,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0.464367928031979,2.16563844500876,0.473227200159376,0.674338760312407,0.723033089650446,0.441175890929576,0,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,1.07470227243418,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,1.42198887333556,0,0,0,0,0,0,0,0.714889968290738,1.08524321078289,0.823240336780769,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,1.09970290300263,0,0,0,0,0,0,1.73737568001095,1.64381058040307,2.86497541183833,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,1.08506009479894,0.623912584592421,1.42743191037729,0.473107245101804,0.702848489956279,0.902838299183157,0,3.10419213877515,0,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.561320188866147,0.384417447767103,1.02341449813341,0.965123526861645,0,0.462629081407967,0.355123450626254,0.657017248110473,0.519254429183621,1.39452454151951,0,0.40101294060657,0.276242966807689,1.37777337797528,1.27463817604702,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,0.614014698904518,0.413509717453592,0.751941714077915,0.145016693914229,0.170453254832202,0.445160178233687,0,0.192190067365106,0.638063562472921,0,2.32422774648643,3.1481234683064,2.0911118104818,1.23213432070436,0,1.73986598415015,0.74129687641568,1.71749864090389,0.744316738719335,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.359744915166629,1.09814811894422,0.471249609382746,0.404364963146632,1.58510321173008,0.842516912477962,0,4.14312932373184,2.11300293513511,0,2.82810863907426,0,1.65409603063837,1.99031692572366,1.31535265576129,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,0,0,4.64436797654861,0.658589785919804,0.379473173765715,0.349934720244983,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.05111450980652,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,3.99227596002388,0,0,2.89999830173917,0.1137934482855,0,0,0,0,0,0,0,0,0,0.886642856860642,0.219385397153973,0.10893846351899,0,0.538651809526579,0.341826167541004,0.922255617552241,0.807818799687949,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,0.619202951523374,1.83309043480088,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,2.57979048707425,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.969890164884194,0,0.225980740780532,0.137041924646751,0.993573058514948,0,0,0.0801588202515337,1.06726497369676,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0.203996435272644,0.577901179803038,0,0,0,0,0,0.558564802544508,0.916641696046735,2.87149209830726,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0.211200673038813,0,0,0,0,0,2.17199840701485,0.864221491201268,1.63293680054705,0,0,1.5334921960688,0,0,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| ||
|short_description=p4@CLMP | |short_description=p4@CLMP | ||
}} | }} |
Latest revision as of 09:08, 16 September 2015
Short description: | p4@CLMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLMP_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 82bp_to_ENST00000448775_5end |
EntrezGene: | CLMP |
HGNC: | 24039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.23e-18 | 15 |
smooth muscle cell of the subclavian artery | 1.95e-10 | 5 |
aortic smooth muscle cell | 3.45e-09 | 10 |
vascular associated smooth muscle cell | 3.96e-09 | 32 |
muscle precursor cell | 9.07e-09 | 58 |
myoblast | 9.07e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.07e-09 | 58 |
multi fate stem cell | 1.35e-08 | 427 |
somatic stem cell | 3.14e-08 | 433 |
smooth muscle cell | 4.68e-08 | 43 |
smooth muscle myoblast | 4.68e-08 | 43 |
stem cell | 9.32e-08 | 441 |
adipocyte of omentum tissue | 6.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 6.37e-13 | 33 |
systemic arterial system | 6.37e-13 | 33 |
thoracic segment blood vessel | 1.95e-10 | 5 |
subclavian artery | 1.95e-10 | 5 |
dense mesenchyme tissue | 2.85e-10 | 73 |
somite | 8.33e-10 | 71 |
presomitic mesoderm | 8.33e-10 | 71 |
presumptive segmental plate | 8.33e-10 | 71 |
dermomyotome | 8.33e-10 | 71 |
trunk paraxial mesoderm | 8.33e-10 | 71 |
paraxial mesoderm | 1.39e-09 | 72 |
presumptive paraxial mesoderm | 1.39e-09 | 72 |
artery | 3.27e-09 | 42 |
arterial blood vessel | 3.27e-09 | 42 |
arterial system | 3.27e-09 | 42 |
blood vessel smooth muscle | 3.45e-09 | 10 |
arterial system smooth muscle | 3.45e-09 | 10 |
artery smooth muscle tissue | 3.45e-09 | 10 |
aorta smooth muscle tissue | 3.45e-09 | 10 |
multilaminar epithelium | 1.88e-08 | 83 |
epithelial vesicle | 2.24e-08 | 78 |
skeletal muscle tissue | 7.04e-08 | 62 |
striated muscle tissue | 7.04e-08 | 62 |
myotome | 7.04e-08 | 62 |
muscle tissue | 1.77e-07 | 64 |
musculature | 1.77e-07 | 64 |
musculature of body | 1.77e-07 | 64 |
trunk blood vessel | 2.63e-07 | 7 |
smooth muscle tissue | 2.87e-07 | 15 |
aorta | 3.34e-07 | 21 |
aortic system | 3.34e-07 | 21 |