FFCP PHASE1:Hg19::chr1:85666655..85666675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84144 | |EntrezGene=84144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25841 | |HGNC=25841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-459bp_to_ENST00000234668_5end | |association_with_transcript=-459bp_to_ENST00000234668_5end | ||
|cluster_id=chr1:85666655..85666675,- | |||
|description=CAGE_peak_2_at_SYDE2_5end | |description=CAGE_peak_2_at_SYDE2_5end | ||
|id=chr1:85666655..85666675,- | |id=chr1:85666655..85666675,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002504;5.32e-08;3!CL:1000279;5.32e-08;3!CL:1000280;5.32e-08;3 | |ontology_enrichment_celltype_v019=CL:0002504;5.32e-08;3!CL:1000279;5.32e-08;3!CL:1000280;5.32e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002504,9.03e-08,3;CL:1000279,9.03e-08,3;CL:1000280,9.03e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.38e-08!143;DOID:305!2.53e-08!106 | |ontology_enrichment_disease=DOID:0050687!1.38e-08!143;DOID:305!2.53e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.27e-07;4!DOID:1612;8.27e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;8.27e-07;4!DOID:1612;8.27e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,8.09e-07,4;DOID:1612,8.09e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.41e-10!155;UBERON:0001555!7.41e-10!155;UBERON:0007026!7.41e-10!155;UBERON:0004119!6.37e-09!169;UBERON:0000925!6.37e-09!169;UBERON:0006595!6.37e-09!169;UBERON:0004921!1.69e-07!129;UBERON:0004185!1.69e-07!129;UBERON:0000059!2.63e-07!11;UBERON:0002530!3.26e-07!59;UBERON:0005409!6.08e-07!35;UBERON:0000160!8.98e-07!27 | |ontology_enrichment_uberon=UBERON:0001007!7.41e-10!155;UBERON:0001555!7.41e-10!155;UBERON:0007026!7.41e-10!155;UBERON:0004119!6.37e-09!169;UBERON:0000925!6.37e-09!169;UBERON:0006595!6.37e-09!169;UBERON:0004921!1.69e-07!129;UBERON:0004185!1.69e-07!129;UBERON:0000059!2.63e-07!11;UBERON:0002530!3.26e-07!59;UBERON:0005409!6.08e-07!35;UBERON:0000160!8.98e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001155;3.36e-09;9!UBERON:0000059;2.20e-07;11!UBERON:0000160;3.36e-07;17!UBERON:0005409;7.38e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001155;3.36e-09;9!UBERON:0000059;2.20e-07;11!UBERON:0000160;3.36e-07;17!UBERON:0005409;7.38e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,2.40e-09,9;UBERON:0000059,1.68e-07,11;UBERON:0000160,2.40e-07,17 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.986680828671798,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0.527533956456907,0,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0.786839080455332,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0.444859689486181,0.267540828089713,2.09071047609954,0,0.383220493601921,0,0,0.637130828648193,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.403213486449465,1.06976078313403,1.15859523106239,2.43806866313962,0,0.383587685530591,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.392937226493138,0.364295288292542,0.370784442784429,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,2.1349799145941,0.49333509683432,0.622422070799533,0.808264032418128,0.163461903113459,0,0,0,0,0,0.149448680551801,0.587172493218824,0,0.421352420106746,0.61246251376468,0.859840221182376,0.206651562351531,1.18800285728205,0,0,0,0.841680569770331,1.00094815897571,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.484938170456436,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0,0.55146986366197,0.217879444092406,0.474541238222193,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.860919069801795,0.171567810298526,0.219500570817251,0,0.502644862058154,0.0925884451585296,0,1.03993478527958,0,0.34779121492523,0.70445216541493,0,0,0.380508304469197,2.37061319387782,3.43394464837949,0,0,0.594524649154913,0,0,0.141775097242386,0.268675568108545,0.290633938513962,2.30029607499127,0,0.352193736052904,0,0,0.25248486685276,0.253991577168676,0,0,0,0.205654985406647,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0,0,0,3.28849385413739,0,0,0,2.84313558994037,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0.49076596687656,0,0,1.24782516918484,0.713715955188647,1.10391690523754,0.468565659970853,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0.640695746278505,0.511707249066704,0.321707842287215,0,0.308419387605311,0,0,0,0.116210378459959,0.362578348774867,0,0,0.574072240823034,0.182091168006717,1.31124414959424,0.902399225814824,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0,1.54227252690289,0,0,0,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0,0.721287081534056,1.46511143709349,1.40266149865,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.322260734604821,0.145016693914229,0.426133137080504,0.356128142586949,0,0,1.02090169995667,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0.316379424718726,2.66882271493355,0.511795582622668,0,0,0,1.07923474549989,3.0199073270966,1.29593642580255,0,0,0,0,0,0,0.272999822815972,2.96951407102797,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.717056761020258,0.294747123039363,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.961416640147258,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0.223676107892416,0,0.19538809540204,0,1.23087398947712,0.270455678475983,0,1.4098700508785,0.748562161632879,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,0,0.445234820091624,0,0.422250816255987,0,0.276283915531148,2.26739473068848,0.20453736500431,0.369254416383208,0,0.718946809178615,0,0,0.591860433821602,0,0,0,0.371072392647405,1.99613798001194,3.38556089410803,0,0.724999575434793,0.682760689712998,0,0,1.72371686620732,0.291604613383254,0,0,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0.435753854075961,0.557694977114413,0.923403102045565,0.683652335082007,3.91958637459702,3.41079048757134,5.10642648033438,0.957003479195758,0.457987967009312,0,1.02193298195737,0,0.831058409500782,1.35357396370308,0.588187602953219,0.839107934879214,1.13852239634511,0.158936578980379,1.05499032264014,0.163232808159148,0.848118428603645,1.73110911793673,0.995261931078505,1.50377859655677,2.4441205797345,0,0,0,0.067401132980677,0,0.234264445725339,0.364909578431332,0.586993856796269,0,0.394584402849391,2.41981432097328,0,0.505492637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| ||
|short_description=p2@SYDE2 | |short_description=p2@SYDE2 | ||
}} | }} |
Latest revision as of 12:48, 19 September 2015
Short description: | p2@SYDE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYDE2_5end |
Coexpression cluster: | NA |
Association with transcript: | -459bp_to_ENST00000234668_5end |
EntrezGene: | SYDE2 |
HGNC: | 25841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 9.03e-08 | 3 |
smooth muscle cell of large intestine | 9.03e-08 | 3 |
smooth muscle cell of colon | 9.03e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
colon | 2.40e-09 | 9 |
large intestine | 1.68e-07 | 11 |
intestine | 2.40e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.09e-07 | 4 |
breast cancer | 8.09e-07 | 4 |