FFCP PHASE1:Hg19::chr21:42539377..42539381,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100423023 | |EntrezGene=100423023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38366 | |HGNC=38366 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-102bp_to_NR_036167_5end | |association_with_transcript=-102bp_to_NR_036167_5end | ||
|cluster_id=chr21:42539377..42539381,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_2_at_MIR3197_5end | |description=CAGE_peak_2_at_MIR3197_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!1.08e-22!6;CL:0002138!1.08e-22!6;CL:0005022!1.08e-22!6;CL:0002274!5.22e-18!5;CL:0000457!5.22e-18!5;CL:0002191!5.22e-18!5;CL:0000097!5.22e-18!5;CL:0000831!5.22e-18!5;CL:0002028!5.22e-18!5;CL:0002139!3.93e-10!24;CL:0000163!4.72e-10!9 | |ontology_enrichment_celltype=CL:0005020!1.08e-22!6;CL:0002138!1.08e-22!6;CL:0005022!1.08e-22!6;CL:0002274!5.22e-18!5;CL:0000457!5.22e-18!5;CL:0002191!5.22e-18!5;CL:0000097!5.22e-18!5;CL:0000831!5.22e-18!5;CL:0002028!5.22e-18!5;CL:0002139!3.93e-10!24;CL:0000163!4.72e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.22e-40;5!CL:0000163;5.13e-23;9 | |ontology_enrichment_celltype_v019=CL:0000097;2.22e-40;5!CL:0000163;5.13e-23;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.22e-40,5;CL:0002028,2.22e-40,5;CL:0000163,5.13e-23,9 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.12e-17;3!UBERON:0003353;1.12e-17;3 | |ontology_enrichment_development_v019=UBERON:0009847;1.12e-17;3!UBERON:0003353;1.12e-17;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!5.68e-17!8;UBERON:0004536!5.68e-17!8;UBERON:0006558!5.68e-17!8;UBERON:0002465!1.57e-13!10;UBERON:0002133!6.49e-12!2;UBERON:0001737!1.24e-09!9;UBERON:0003978!3.19e-08!3;UBERON:0009751!3.19e-08!3;UBERON:0000946!3.19e-08!3;UBERON:0002523!3.19e-08!3;UBERON:0005983!3.19e-08!3;UBERON:0002165!3.19e-08!3;UBERON:0002062!3.19e-08!3;UBERON:0007280!3.19e-08!3;UBERON:0000055!2.83e-07!69;UBERON:0000996!4.33e-07!1;UBERON:0002134!6.80e-07!1;UBERON:0005208!6.80e-07!1;UBERON:0005946!6.80e-07!1;UBERON:0005965!6.80e-07!1;UBERON:0002078!6.80e-07!1;UBERON:0001557!8.48e-07!19 | |ontology_enrichment_uberon=UBERON:0001473!5.68e-17!8;UBERON:0004536!5.68e-17!8;UBERON:0006558!5.68e-17!8;UBERON:0002465!1.57e-13!10;UBERON:0002133!6.49e-12!2;UBERON:0001737!1.24e-09!9;UBERON:0003978!3.19e-08!3;UBERON:0009751!3.19e-08!3;UBERON:0000946!3.19e-08!3;UBERON:0002523!3.19e-08!3;UBERON:0005983!3.19e-08!3;UBERON:0002165!3.19e-08!3;UBERON:0002062!3.19e-08!3;UBERON:0007280!3.19e-08!3;UBERON:0000055!2.83e-07!69;UBERON:0000996!4.33e-07!1;UBERON:0002134!6.80e-07!1;UBERON:0005208!6.80e-07!1;UBERON:0005946!6.80e-07!1;UBERON:0005965!6.80e-07!1;UBERON:0002078!6.80e-07!1;UBERON:0001557!8.48e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.42e-50;1!UBERON:0000077;2.22e-08;27 | |ontology_enrichment_uberon_v019=UBERON:0000996;2.42e-50;1!UBERON:0000077;2.22e-08;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.42e-50,1;UBERON:0000162,3.66e-15,14;UBERON:0001353,3.66e-15,14;UBERON:0000163,3.66e-15,14;UBERON:0006866,3.66e-15,14;UBERON:0000164,3.66e-15,14;UBERON:0000931,3.66e-15,14;UBERON:0004122,3.15e-14,15;UBERON:0001046,1.81e-11,19;UBERON:0003064,4.06e-08,28;UBERON:0000077,7.15e-08,29 | |||
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|short_description=p2@MIR3197 | |short_description=p2@MIR3197 | ||
}} | }} |
Latest revision as of 12:17, 18 September 2015
Short description: | p2@MIR3197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR3197_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -102bp_to_NR_036167_5end |
EntrezGene: | MIR3197 |
HGNC: | 38366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.22e-40 | 5 |
basophil mast progenitor cell | 2.22e-40 | 5 |
endocrine cell | 5.13e-23 | 9 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.42e-50 | 1 |
cloaca | 3.66e-15 | 14 |
anal region | 3.66e-15 | 14 |
embryonic cloaca | 3.66e-15 | 14 |
terminal part of digestive tract | 3.66e-15 | 14 |
primitive urogenital sinus | 3.66e-15 | 14 |
proctodeum | 3.66e-15 | 14 |
genitourinary system | 3.15e-14 | 15 |
hindgut | 1.81e-11 | 19 |
intermediate mesoderm | 4.06e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.15e-08 | 29 |