FFCP PHASE1:Hg19::chr10:54367116..54367120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:54367116..54367120,+ | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_at_chr10:54367116..54367120,+ | |description=CAGE_peak_at_chr10:54367116..54367120,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000083;3.42e-11;4!CL:0002251;5.70e-09;20 | |ontology_enrichment_celltype_v019=CL:0000083;3.42e-11;4!CL:0002251;5.70e-09;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,3.42e-11,4;CL:0002251,5.93e-09,20;CL:0000223,6.27e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!CL:0000223;9.54e-07;58 | |ontology_enrichment_development_v019=UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!CL:0000223;9.54e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!7.25e-17!14;DOID:305!1.32e-09!106;DOID:162!5.98e-09!235;DOID:14566!1.21e-08!239;DOID:7!1.26e-08!39;DOID:0050687!4.86e-08!143 | |ontology_enrichment_disease=DOID:1749!7.25e-17!14;DOID:305!1.32e-09!106;DOID:162!5.98e-09!235;DOID:14566!1.21e-08!239;DOID:7!1.26e-08!39;DOID:0050687!4.86e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:4074;5.69e-21;2!DOID:4905;5.69e-21;2!DOID:3498;5.69e-21;2!DOID:1749;2.24e-12;14!DOID:1793;3.42e-11;4!DOID:170;6.78e-08;6 | |ontology_enrichment_disease_v019=DOID:4074;5.69e-21;2!DOID:4905;5.69e-21;2!DOID:3498;5.69e-21;2!DOID:1749;2.24e-12;14!DOID:1793;3.42e-11;4!DOID:170;6.78e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4074,5.70e-21,2;DOID:4905,5.70e-21,2;DOID:3498,5.70e-21,2;DOID:1749,2.37e-12,14;DOID:1793,3.42e-11,4;DOID:170,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.82e-12!4;UBERON:0004785!2.82e-12!4;UBERON:0002394!1.47e-11!4;UBERON:0003928!1.47e-11!4;UBERON:0002294!1.91e-11!7;UBERON:0001173!1.91e-11!7;UBERON:0004912!1.91e-11!7;UBERON:0003729!6.61e-10!5 | |ontology_enrichment_uberon=UBERON:0003343!2.82e-12!4;UBERON:0004785!2.82e-12!4;UBERON:0002394!1.47e-11!4;UBERON:0003928!1.47e-11!4;UBERON:0002294!1.91e-11!7;UBERON:0001173!1.91e-11!7;UBERON:0004912!1.91e-11!7;UBERON:0003729!6.61e-10!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.21e-40;1!UBERON:0005208;2.21e-40;1!UBERON:0004145;2.21e-40;1!UBERON:0005946;2.21e-40;1!UBERON:0005965;2.21e-40;1!UBERON:0002078;2.21e-40;1!UBERON:0003343;2.22e-40;4!UBERON:0004785;2.22e-40;4!UBERON:0000974;2.38e-27;6!UBERON:0002081;5.69e-21;2!UBERON:0002133;5.69e-21;2!UBERON:0001723;1.83e-14;3!UBERON:0003978;1.83e-14;3!UBERON:0004151;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0003729;3.03e-13;13!UBERON:0000161;2.17e-09;19!UBERON:0000166;2.17e-09;19!UBERON:0000344;5.70e-09;20 | |ontology_enrichment_uberon_v019=UBERON:0002134;2.21e-40;1!UBERON:0005208;2.21e-40;1!UBERON:0004145;2.21e-40;1!UBERON:0005946;2.21e-40;1!UBERON:0005965;2.21e-40;1!UBERON:0002078;2.21e-40;1!UBERON:0003343;2.22e-40;4!UBERON:0004785;2.22e-40;4!UBERON:0000974;2.38e-27;6!UBERON:0002081;5.69e-21;2!UBERON:0002133;5.69e-21;2!UBERON:0001723;1.83e-14;3!UBERON:0003978;1.83e-14;3!UBERON:0004151;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0003729;3.03e-13;13!UBERON:0000161;2.17e-09;19!UBERON:0000166;2.17e-09;19!UBERON:0000344;5.70e-09;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.48e-40,1;UBERON:0005208,1.48e-40,1;UBERON:0005946,1.48e-40,1;UBERON:0005965,1.48e-40,1;UBERON:0002078,1.48e-40,1;UBERON:0003343,2.71e-40,4;UBERON:0004785,2.71e-40,4;UBERON:0002081,4.66e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0000974,7.51e-17,10;UBERON:0003978,1.60e-14,3;UBERON:0009751,1.60e-14,3;UBERON:0004151,1.60e-14,3;UBERON:0000946,1.60e-14,3;UBERON:0002523,1.60e-14,3;UBERON:0005983,1.60e-14,3;UBERON:0004145,1.60e-14,3;UBERON:0002165,1.60e-14,3;UBERON:0002062,1.60e-14,3;UBERON:0007280,1.60e-14,3;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0003729,3.22e-13,13;UBERON:0000344,5.93e-09,20;UBERON:0000166,3.15e-08,22;UBERON:0004797,5.70e-07,7 | |||
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|short_description=p@chr10:54367116..54367120,+ | |short_description=p@chr10:54367116..54367120,+ | ||
}} | }} |
Latest revision as of 14:10, 23 July 2015
Short description: | p@chr10:54367116..54367120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54367116..54367120, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 3.42e-11 | 4 |
epithelial cell of alimentary canal | 5.93e-09 | 20 |
endodermal cell | 6.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.48e-40 | 1 |
right atrium valve | 1.48e-40 | 1 |
outflow tract of atrium | 1.48e-40 | 1 |
outflow part of right atrium | 1.48e-40 | 1 |
right cardiac atrium | 1.48e-40 | 1 |
mucosa of oral region | 2.71e-40 | 4 |
respiratory system mucosa | 2.71e-40 | 4 |
cardiac atrium | 4.66e-21 | 2 |
atrioventricular valve | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
neck | 7.51e-17 | 10 |
valve | 1.60e-14 | 3 |
cardiac mesenchyme | 1.60e-14 | 3 |
cardiac chamber | 1.60e-14 | 3 |
cardial valve | 1.60e-14 | 3 |
tunica intima | 1.60e-14 | 3 |
heart layer | 1.60e-14 | 3 |
outflow tract | 1.60e-14 | 3 |
endocardium | 1.60e-14 | 3 |
endocardial cushion | 1.60e-14 | 3 |
presumptive endocardium | 1.60e-14 | 3 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
mouth mucosa | 3.22e-13 | 13 |
mucosa | 5.93e-09 | 20 |
oral opening | 3.15e-08 | 22 |
blood vessel layer | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 5.70e-21 | 2 |
pancreatic carcinoma | 5.70e-21 | 2 |
pancreatic ductal adenocarcinoma | 5.70e-21 | 2 |
squamous cell carcinoma | 2.37e-12 | 14 |
pancreatic cancer | 3.42e-11 | 4 |
endocrine gland cancer | 6.78e-08 | 6 |