FFCP PHASE1:Hg19::chr12:54020107..54020196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11016 | |EntrezGene=11016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=792 | |HGNC=792 | ||
|TSSclassifier=strong | |||
|UniProt=B2RMP1,P17544,A5D6Y4 | |UniProt=B2RMP1,P17544,A5D6Y4 | ||
|association_with_transcript=2bp_to_ENST00000306727,ENST00000415113,ENST00000420353,NM_001130060,NM_001206682,NM_006856,uc001sdz.2,uc001seb.3,uc010sok.1,uc010sol.1_5end | |association_with_transcript=2bp_to_ENST00000306727,ENST00000415113,ENST00000420353,NM_001130060,NM_001206682,NM_006856,uc001sdz.2,uc001seb.3,uc010sok.1,uc010sol.1_5end | ||
|cluster_id=chr12:54020107..54020196,- | |||
|description=CAGE_peak_1_at_ATF7_5end | |description=CAGE_peak_1_at_ATF7_5end | ||
|id=chr12:54020107..54020196,- | |id=chr12:54020107..54020196,- | ||
|ontology_enrichment_celltype=CL:0000115!5.50e-09!35;CL:0002078!7.72e-08!44;CL:0002139!3.78e-07!24 | |ontology_enrichment_celltype=CL:0000115!5.50e-09!35;CL:0002078!7.72e-08!44;CL:0002139!3.78e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000115;5.97e-08;36!CL:0002139;5.15e-07;24 | |ontology_enrichment_celltype_v019=CL:0000115;5.97e-08;36!CL:0002139;5.15e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.52e-09,36;CL:0002078,6.10e-08,45;CL:0002139,3.78e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-25!115;UBERON:0001049!8.41e-17!57;UBERON:0005068!8.41e-17!57;UBERON:0006241!8.41e-17!57;UBERON:0007135!8.41e-17!57;UBERON:0002616!2.74e-15!59;UBERON:0000468!8.50e-15!659;UBERON:0000955!1.26e-14!69;UBERON:0006238!1.26e-14!69;UBERON:0000477!2.39e-14!286;UBERON:0001017!2.98e-14!82;UBERON:0005743!3.68e-13!86;UBERON:0002346!5.87e-13!90;UBERON:0000073!6.06e-13!94;UBERON:0001016!6.06e-13!94;UBERON:0003075!5.32e-12!86;UBERON:0007284!5.32e-12!86;UBERON:0004111!1.87e-11!241;UBERON:0000025!4.42e-11!194;UBERON:0000467!6.54e-11!625;UBERON:0000480!7.79e-11!626;UBERON:0000922!8.65e-11!612;UBERON:0000924!2.18e-10!173;UBERON:0006601!2.18e-10!173;UBERON:0003080!2.21e-10!42;UBERON:0000062!2.52e-10!511;UBERON:0002780!7.26e-10!41;UBERON:0001890!7.26e-10!41;UBERON:0006240!7.26e-10!41;UBERON:0002050!7.41e-10!605;UBERON:0005423!7.41e-10!605;UBERON:0004121!1.31e-09!169;UBERON:0000923!1.53e-09!604;UBERON:0005291!1.53e-09!604;UBERON:0006598!1.53e-09!604;UBERON:0002532!1.53e-09!604;UBERON:0000153!1.89e-09!129;UBERON:0007811!1.89e-09!129;UBERON:0000033!2.37e-09!123;UBERON:0003076!3.12e-08!15;UBERON:0003057!3.12e-08!15;UBERON:0000064!3.54e-08!219;UBERON:0002020!6.92e-08!34;UBERON:0003528!6.92e-08!34;UBERON:0001893!7.56e-08!34;UBERON:0002791!9.60e-08!33;UBERON:0004732!2.94e-07!13;UBERON:0003056!6.64e-07!61;UBERON:0001869!7.88e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.17e-25!115;UBERON:0001049!8.41e-17!57;UBERON:0005068!8.41e-17!57;UBERON:0006241!8.41e-17!57;UBERON:0007135!8.41e-17!57;UBERON:0002616!2.74e-15!59;UBERON:0000468!8.50e-15!659;UBERON:0000955!1.26e-14!69;UBERON:0006238!1.26e-14!69;UBERON:0000477!2.39e-14!286;UBERON:0001017!2.98e-14!82;UBERON:0005743!3.68e-13!86;UBERON:0002346!5.87e-13!90;UBERON:0000073!6.06e-13!94;UBERON:0001016!6.06e-13!94;UBERON:0003075!5.32e-12!86;UBERON:0007284!5.32e-12!86;UBERON:0004111!1.87e-11!241;UBERON:0000025!4.42e-11!194;UBERON:0000467!6.54e-11!625;UBERON:0000480!7.79e-11!626;UBERON:0000922!8.65e-11!612;UBERON:0000924!2.18e-10!173;UBERON:0006601!2.18e-10!173;UBERON:0003080!2.21e-10!42;UBERON:0000062!2.52e-10!511;UBERON:0002780!7.26e-10!41;UBERON:0001890!7.26e-10!41;UBERON:0006240!7.26e-10!41;UBERON:0002050!7.41e-10!605;UBERON:0005423!7.41e-10!605;UBERON:0004121!1.31e-09!169;UBERON:0000923!1.53e-09!604;UBERON:0005291!1.53e-09!604;UBERON:0006598!1.53e-09!604;UBERON:0002532!1.53e-09!604;UBERON:0000153!1.89e-09!129;UBERON:0007811!1.89e-09!129;UBERON:0000033!2.37e-09!123;UBERON:0003076!3.12e-08!15;UBERON:0003057!3.12e-08!15;UBERON:0000064!3.54e-08!219;UBERON:0002020!6.92e-08!34;UBERON:0003528!6.92e-08!34;UBERON:0001893!7.56e-08!34;UBERON:0002791!9.60e-08!33;UBERON:0004732!2.94e-07!13;UBERON:0003056!6.64e-07!61;UBERON:0001869!7.88e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.70e-09;53!UBERON:0002616;5.70e-09;53!UBERON:0007023;1.18e-07;114!UBERON:0002780;1.99e-07;41!UBERON:0001890;1.99e-07;41!UBERON:0004732;3.50e-07;13!UBERON:0001893;9.76e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0000073;5.70e-09;53!UBERON:0002616;5.70e-09;53!UBERON:0007023;1.18e-07;114!UBERON:0002780;1.99e-07;41!UBERON:0001890;1.99e-07;41!UBERON:0004732;3.50e-07;13!UBERON:0001893;9.76e-07;34 | ||
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| ||
|short_description=p1@ATF7 | |short_description=p1@ATF7 | ||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p1@ATF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000306727, ENST00000415113, ENST00000420353, NM_001130060, NM_001206682, NM_006856, uc001sdz.2, uc001seb.3, uc010sok.1, uc010sol.1_5end |
EntrezGene: | ATF7 |
HGNC: | 792 |
UniProt: | B2RMP1P17544A5D6Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.52e-09 | 36 |
meso-epithelial cell | 6.10e-08 | 45 |
endothelial cell of vascular tree | 3.78e-07 | 24 |