FFCP PHASE1:Hg19::chr20:33759632..33759670,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:33759632..33759670,+
|short_description=p4@PROCR
|description=CAGE_peak_4_at_PROCR_5end
|association_with_transcript=-103bp_to_ENST00000216968,NM_006404,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10544 | |EntrezGene=10544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9452 | |HGNC=9452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNN8 | |UniProt=Q9UNN8 | ||
|association_with_transcript=-103bp_to_ENST00000216968,NM_006404,uc002xbt.2_5end | |||
|cluster_id=chr20:33759632..33759670,+ | |||
|description=CAGE_peak_4_at_PROCR_5end | |||
|id=chr20:33759632..33759670,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.34e-11!180;CL:0000222!1.78e-10!119;CL:1000497!1.90e-08!18;CL:0002518!1.90e-08!18;CL:1000449!1.96e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.88e-12;17!CL:0002518;4.88e-12;17!CL:1000449;1.30e-10;15!CL:0002681;2.98e-09;12!CL:0002584;2.98e-09;12!CL:1000507;1.14e-07;10!CL:1000494;1.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.16e-12,17;CL:0002518,3.16e-12,17;CL:1000449,9.92e-11,15;CL:0002681,2.65e-09,12;CL:0002584,2.65e-09,12;CL:0000222,3.85e-08,121;CL:1000507,6.40e-08,10;CL:1000494,6.40e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.31e-13!659;UBERON:0000926!2.71e-12!448;UBERON:0004120!2.71e-12!448;UBERON:0006603!2.71e-12!448;UBERON:0003886!2.25e-11!63;UBERON:0002100!1.12e-10!216;UBERON:0000467!1.27e-10!625;UBERON:0000480!2.12e-10!626;UBERON:0005256!1.82e-09!143;UBERON:0002553!3.11e-09!70;UBERON:0003914!3.98e-09!118;UBERON:0003104!1.69e-08!238;UBERON:0009142!1.69e-08!238;UBERON:0002049!3.01e-08!79;UBERON:0007798!3.01e-08!79;UBERON:0006555!8.48e-08!17;UBERON:0005103!8.48e-08!17;UBERON:0000083!8.48e-08!17;UBERON:0009201!8.48e-08!17;UBERON:0004819!8.48e-08!17;UBERON:0006553!8.48e-08!17;UBERON:0003074!8.48e-08!17;UBERON:0003060!8.48e-08!17;UBERON:0000080!8.82e-08!18;UBERON:0002120!8.82e-08!18;UBERON:0004875!8.82e-08!18;UBERON:0005721!8.82e-08!18;UBERON:0005754!8.82e-08!18;UBERON:0007297!8.82e-08!18;UBERON:0000464!1.77e-07!104;UBERON:0004211!1.96e-07!16;UBERON:0001285!1.96e-07!16;UBERON:0007684!1.96e-07!16;UBERON:0003220!1.96e-07!16;UBERON:0004208!1.96e-07!16;UBERON:0003103!3.01e-07!69;UBERON:0000062!3.78e-07!511;UBERON:0000922!3.79e-07!612;UBERON:0000055!4.50e-07!69;UBERON:0000353!4.83e-07!17;UBERON:0004876!6.00e-07!20;UBERON:0005156!6.80e-07!59;UBERON:0000990!6.80e-07!59;UBERON:0003133!8.12e-07!48;UBERON:0004458!8.20e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.30e-10;15!UBERON:0004819;1.30e-10;15!UBERON:0001285;1.30e-10;15!UBERON:0007684;1.30e-10;15!UBERON:0001225;2.98e-09;12!UBERON:0008987;2.98e-09;12!UBERON:0000353;6.16e-09;15!UBERON:0001851;4.64e-08;15!UBERON:0002113;4.95e-08;24!UBERON:0011143;4.95e-08;24!UBERON:0004211;1.14e-07;10!UBERON:0009773;1.14e-07;10!UBERON:0001231;1.14e-07;10!UBERON:0004810;1.14e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,2.95e-11,16;UBERON:0004819,2.95e-11,16;UBERON:0004211,9.92e-11,15;UBERON:0009773,9.92e-11,15;UBERON:0001231,9.92e-11,15;UBERON:0001285,9.92e-11,15;UBERON:0007684,9.92e-11,15;UBERON:0004208,9.92e-11,15;UBERON:0001225,2.65e-09,12;UBERON:0008987,2.65e-09,12;UBERON:0000353,4.60e-09,15;UBERON:0003886,1.64e-08,54;UBERON:0001851,4.06e-08,15;UBERON:0002113,4.99e-08,26;UBERON:0003918,4.99e-08,26;UBERON:0011143,4.99e-08,26;UBERON:0005095,4.99e-08,26;UBERON:0007687,4.99e-08,26;UBERON:0004810,6.40e-08,10;UBERON:0005631,1.62e-07,14;UBERON:0000158,1.62e-07,14;UBERON:0003103,1.85e-07,68;UBERON:0003914,3.83e-07,117 | |||
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| ||
|short_description=p4@PROCR | |||
}} | }} |
Latest revision as of 19:16, 15 September 2015
Short description: | p4@PROCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PROCR_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENST00000216968, NM_006404, uc002xbt.2_5end |
EntrezGene: | PROCR |
HGNC: | 9452 |
UniProt: | Q9UNN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.16e-12 | 17 |
kidney epithelial cell | 3.16e-12 | 17 |
epithelial cell of nephron | 9.92e-11 | 15 |
kidney cortical cell | 2.65e-09 | 12 |
renal cortical epithelial cell | 2.65e-09 | 12 |
mesodermal cell | 3.85e-08 | 121 |
kidney tubule cell | 6.40e-08 | 10 |
nephron tubule epithelial cell | 6.40e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 2.95e-11 | 16 |
kidney epithelium | 2.95e-11 | 16 |
nephron epithelium | 9.92e-11 | 15 |
renal tubule | 9.92e-11 | 15 |
nephron tubule | 9.92e-11 | 15 |
nephron | 9.92e-11 | 15 |
uriniferous tubule | 9.92e-11 | 15 |
nephrogenic mesenchyme | 9.92e-11 | 15 |
cortex of kidney | 2.65e-09 | 12 |
renal parenchyma | 2.65e-09 | 12 |
parenchyma | 4.60e-09 | 15 |
body cavity precursor | 1.64e-08 | 54 |
cortex | 4.06e-08 | 15 |
kidney | 4.99e-08 | 26 |
kidney mesenchyme | 4.99e-08 | 26 |
upper urinary tract | 4.99e-08 | 26 |
kidney rudiment | 4.99e-08 | 26 |
kidney field | 4.99e-08 | 26 |
nephron tubule epithelium | 6.40e-08 | 10 |
extraembryonic membrane | 1.62e-07 | 14 |
membranous layer | 1.62e-07 | 14 |
compound organ | 1.85e-07 | 68 |
epithelial tube | 3.83e-07 | 117 |