FFCP PHASE1:Hg19::chr3:181431401..181431408,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:181431401..181431408,+ | |||
|coexpression_cluster_id=C1056 | |coexpression_cluster_id=C1056 | ||
|description=CAGE_peak_at_chr3:181431401..181431408,+ | |description=CAGE_peak_at_chr3:181431401..181431408,+ | ||
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|ontology_enrichment_celltype=CL:0002319!2.54e-18!25;CL:0000047!8.62e-13!8;CL:0000133!8.19e-11!59;CL:0000128!1.53e-10!7;CL:0000126!1.53e-10!7;CL:0000127!1.53e-10!7;CL:0002453!1.53e-10!7;CL:0000540!2.45e-10!6;CL:0000031!2.45e-10!6;CL:0000404!2.45e-10!6;CL:0002322!7.20e-09!5;CL:0000095!7.64e-09!17;CL:0000123!7.64e-09!17;CL:0000221!1.83e-08!71 | |ontology_enrichment_celltype=CL:0002319!2.54e-18!25;CL:0000047!8.62e-13!8;CL:0000133!8.19e-11!59;CL:0000128!1.53e-10!7;CL:0000126!1.53e-10!7;CL:0000127!1.53e-10!7;CL:0002453!1.53e-10!7;CL:0000540!2.45e-10!6;CL:0000031!2.45e-10!6;CL:0000404!2.45e-10!6;CL:0002322!7.20e-09!5;CL:0000095!7.64e-09!17;CL:0000123!7.64e-09!17;CL:0000221!1.83e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.54e-19;25!CL:0000540;1.54e-16;6!CL:0000404;1.54e-16;6!CL:0002322;4.56e-14;5!CL:0000128;2.43e-09;7!CL:0000126;2.43e-09;7!CL:0000127;2.43e-09;7!CL:0002605;2.44e-09;3 | |ontology_enrichment_celltype_v019=CL:0002319;7.54e-19;25!CL:0000540;1.54e-16;6!CL:0000404;1.54e-16;6!CL:0002322;4.56e-14;5!CL:0000128;2.43e-09;7!CL:0000126;2.43e-09;7!CL:0000127;2.43e-09;7!CL:0002605;2.44e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.16e-20,8;CL:0002319,6.62e-19,25;CL:0000540,1.75e-16,6;CL:0000031,1.75e-16,6;CL:0000404,1.75e-16,6;CL:0002322,5.45e-14,5;CL:0000133,3.89e-11,59;CL:0000128,1.64e-09,7;CL:0000126,1.64e-09,7;CL:0000127,1.64e-09,7;CL:0002453,1.64e-09,7;CL:0002605,1.91e-09,3;CL:0000221,2.41e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.54e-16;6!CL:0000133;4.99e-07;59!UBERON:0006601;7.96e-07;82 | |ontology_enrichment_development_v019=CL:0000031;1.54e-16;6!CL:0000133;4.99e-07;59!UBERON:0006601;7.96e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.80e-62!82;UBERON:0005743!3.33e-60!86;UBERON:0000073!4.18e-60!94;UBERON:0001016!4.18e-60!94;UBERON:0001049!1.45e-57!57;UBERON:0005068!1.45e-57!57;UBERON:0006241!1.45e-57!57;UBERON:0007135!1.45e-57!57;UBERON:0002616!7.95e-50!59;UBERON:0000955!1.92e-47!69;UBERON:0006238!1.92e-47!69;UBERON:0002780!6.24e-43!41;UBERON:0001890!6.24e-43!41;UBERON:0006240!6.24e-43!41;UBERON:0002346!8.65e-43!90;UBERON:0003075!7.92e-42!86;UBERON:0007284!7.92e-42!86;UBERON:0003080!1.29e-41!42;UBERON:0002020!3.91e-40!34;UBERON:0003528!3.91e-40!34;UBERON:0001893!6.58e-40!34;UBERON:0002791!7.71e-39!33;UBERON:0001869!3.41e-37!32;UBERON:0000924!5.09e-37!173;UBERON:0006601!5.09e-37!173;UBERON:0004121!8.07e-36!169;UBERON:0000033!3.21e-31!123;UBERON:0000153!4.53e-31!129;UBERON:0007811!4.53e-31!129;UBERON:0003056!5.03e-31!61;UBERON:0000956!8.43e-29!25;UBERON:0000203!8.43e-29!25;UBERON:0007023!4.60e-25!115;UBERON:0002619!2.48e-24!22;UBERON:0001950!1.53e-21!20;UBERON:0003076!1.78e-16!15;UBERON:0003057!1.78e-16!15;UBERON:0002420!4.78e-13!9;UBERON:0007245!4.78e-13!9;UBERON:0010009!4.78e-13!9;UBERON:0010011!4.78e-13!9;UBERON:0000454!4.78e-13!9;UBERON:0004733!5.77e-13!12;UBERON:0002028!5.77e-13!12;UBERON:0007277!5.77e-13!12;UBERON:0002308!1.11e-12!9;UBERON:0000125!1.11e-12!9;UBERON:0004732!9.66e-12!13;UBERON:0000025!2.78e-11!194;UBERON:0009663!3.35e-10!7;UBERON:0000064!1.75e-09!219;UBERON:0001871!2.38e-09!7;UBERON:0000200!2.86e-09!6;UBERON:0002680!3.69e-09!9;UBERON:0001895!3.69e-09!9;UBERON:0010092!3.69e-09!9;UBERON:0002298!6.79e-09!8;UBERON:0004111!1.03e-08!241;UBERON:0000922!2.13e-08!612;UBERON:0000349!2.62e-08!5;UBERON:0000475!1.47e-07!365;UBERON:0001872!2.46e-07!5;UBERON:0000468!2.96e-07!659;UBERON:0000477!9.04e-07!286 | |ontology_enrichment_uberon=UBERON:0001017!3.80e-62!82;UBERON:0005743!3.33e-60!86;UBERON:0000073!4.18e-60!94;UBERON:0001016!4.18e-60!94;UBERON:0001049!1.45e-57!57;UBERON:0005068!1.45e-57!57;UBERON:0006241!1.45e-57!57;UBERON:0007135!1.45e-57!57;UBERON:0002616!7.95e-50!59;UBERON:0000955!1.92e-47!69;UBERON:0006238!1.92e-47!69;UBERON:0002780!6.24e-43!41;UBERON:0001890!6.24e-43!41;UBERON:0006240!6.24e-43!41;UBERON:0002346!8.65e-43!90;UBERON:0003075!7.92e-42!86;UBERON:0007284!7.92e-42!86;UBERON:0003080!1.29e-41!42;UBERON:0002020!3.91e-40!34;UBERON:0003528!3.91e-40!34;UBERON:0001893!6.58e-40!34;UBERON:0002791!7.71e-39!33;UBERON:0001869!3.41e-37!32;UBERON:0000924!5.09e-37!173;UBERON:0006601!5.09e-37!173;UBERON:0004121!8.07e-36!169;UBERON:0000033!3.21e-31!123;UBERON:0000153!4.53e-31!129;UBERON:0007811!4.53e-31!129;UBERON:0003056!5.03e-31!61;UBERON:0000956!8.43e-29!25;UBERON:0000203!8.43e-29!25;UBERON:0007023!4.60e-25!115;UBERON:0002619!2.48e-24!22;UBERON:0001950!1.53e-21!20;UBERON:0003076!1.78e-16!15;UBERON:0003057!1.78e-16!15;UBERON:0002420!4.78e-13!9;UBERON:0007245!4.78e-13!9;UBERON:0010009!4.78e-13!9;UBERON:0010011!4.78e-13!9;UBERON:0000454!4.78e-13!9;UBERON:0004733!5.77e-13!12;UBERON:0002028!5.77e-13!12;UBERON:0007277!5.77e-13!12;UBERON:0002308!1.11e-12!9;UBERON:0000125!1.11e-12!9;UBERON:0004732!9.66e-12!13;UBERON:0000025!2.78e-11!194;UBERON:0009663!3.35e-10!7;UBERON:0000064!1.75e-09!219;UBERON:0001871!2.38e-09!7;UBERON:0000200!2.86e-09!6;UBERON:0002680!3.69e-09!9;UBERON:0001895!3.69e-09!9;UBERON:0010092!3.69e-09!9;UBERON:0002298!6.79e-09!8;UBERON:0004111!1.03e-08!241;UBERON:0000922!2.13e-08!612;UBERON:0000349!2.62e-08!5;UBERON:0000475!1.47e-07!365;UBERON:0001872!2.46e-07!5;UBERON:0000468!2.96e-07!659;UBERON:0000477!9.04e-07!286 | ||
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|short_description=p@chr3:181431401..181431408,+ | |short_description=p@chr3:181431401..181431408,+ | ||
}} | }} |
Latest revision as of 18:36, 29 July 2015
Short description: | p@chr3:181431401..181431408, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:181431401..181431408, + |
Coexpression cluster: | C1056_small_Neural_Astrocyte_teratocarcinoma_H9_hippocampus_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.16e-20 | 8 |
neural cell | 6.62e-19 | 25 |
neuron | 1.75e-16 | 6 |
neuroblast | 1.75e-16 | 6 |
electrically signaling cell | 1.75e-16 | 6 |
embryonic stem cell | 5.45e-14 | 5 |
neurectodermal cell | 3.89e-11 | 59 |
oligodendrocyte | 1.64e-09 | 7 |
macroglial cell | 1.64e-09 | 7 |
astrocyte | 1.64e-09 | 7 |
oligodendrocyte precursor cell | 1.64e-09 | 7 |
astrocyte of the cerebral cortex | 1.91e-09 | 3 |
ectodermal cell | 2.41e-08 | 72 |