FFCP PHASE1:Hg19::chr17:46806419..46806438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10481 | |EntrezGene=10481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5112 | |HGNC=5112 | ||
|TSSclassifier=strong | |||
|UniProt=Q92826 | |UniProt=Q92826 | ||
|association_with_transcript=101bp_to_ENST00000290295_5end | |association_with_transcript=101bp_to_ENST00000290295_5end | ||
|cluster_id=chr17:46806419..46806438,- | |||
|coexpression_cluster_id=C2415 | |coexpression_cluster_id=C2415 | ||
|description=CAGE_peak_4_at_HOXB13_5end | |description=CAGE_peak_4_at_HOXB13_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!3.15e-07!254 | |ontology_enrichment_celltype=CL:0000066!3.15e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.47e-11;10!CL:0002567;4.95e-10;3!CL:0000147;6.86e-08;14 | |ontology_enrichment_celltype_v019=CL:0000148;5.47e-11;10!CL:0002567;4.95e-10;3!CL:0000147;6.86e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.54e-11,10;CL:0000541,4.54e-11,10;CL:0002567,4.31e-10,3;CL:0000147,6.03e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.25e-10;3!UBERON:0003353;1.25e-10;3 | |ontology_enrichment_development_v019=UBERON:0009847;1.25e-10;3!UBERON:0003353;1.25e-10;3 | ||
|ontology_enrichment_disease=DOID:0050687!2.80e-27!143;DOID:14566!2.93e-22!239;DOID:162!2.72e-21!235;DOID:305!3.69e-12!106;DOID:3095!8.69e-11!22;DOID:2994!8.69e-11!22;DOID:1115!6.17e-10!20;DOID:171!1.31e-09!10 | |ontology_enrichment_disease=DOID:0050687!2.80e-27!143;DOID:14566!2.93e-22!239;DOID:162!2.72e-21!235;DOID:305!3.69e-12!106;DOID:3095!8.69e-11!22;DOID:2994!8.69e-11!22;DOID:1115!6.17e-10!20;DOID:171!1.31e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;1.19e-17;10!DOID:3095;8.05e-15;22!DOID:2994;8.05e-15;22!DOID:1115;4.15e-12;20!DOID:3119;4.06e-08;14!DOID:3371;5.24e-08;1!DOID:4549;5.24e-08;1!DOID:5861;5.24e-08;1!DOID:6496;5.24e-08;1 | |ontology_enrichment_disease_v019=DOID:171;1.19e-17;10!DOID:3095;8.05e-15;22!DOID:2994;8.05e-15;22!DOID:1115;4.15e-12;20!DOID:3119;4.06e-08;14!DOID:3371;5.24e-08;1!DOID:4549;5.24e-08;1!DOID:5861;5.24e-08;1!DOID:6496;5.24e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.34e-17,10;DOID:3095,9.05e-15,22;DOID:2994,9.05e-15,22;DOID:1115,4.68e-12,20;DOID:0050687,2.69e-09,143;DOID:3119,4.30e-08,14;DOID:3371,6.68e-08,1;DOID:4549,6.68e-08,1;DOID:5861,6.68e-08,1;DOID:6496,6.68e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-08!27;UBERON:0005409!2.74e-08!35;UBERON:0001046!8.46e-07!19 | |ontology_enrichment_uberon=UBERON:0000160!1.01e-08!27;UBERON:0005409!2.74e-08!35;UBERON:0001046!8.46e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.88e-17;4!UBERON:0000923;7.88e-17;4!UBERON:0010316;7.88e-17;4!UBERON:0005291;7.88e-17;4!UBERON:0001052;5.32e-16;4!UBERON:0002050;1.42e-13;5!UBERON:0005423;1.42e-13;5!UBERON:0004907;6.50e-13;5!UBERON:0000059;4.25e-10;11!UBERON:0000922;4.13e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0002346;7.88e-17;4!UBERON:0000923;7.88e-17;4!UBERON:0010316;7.88e-17;4!UBERON:0005291;7.88e-17;4!UBERON:0001052;5.32e-16;4!UBERON:0002050;1.42e-13;5!UBERON:0005423;1.42e-13;5!UBERON:0004907;6.50e-13;5!UBERON:0000059;4.25e-10;11!UBERON:0000922;4.13e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,4.68e-16,4;UBERON:0004907,5.87e-13,5;UBERON:0000059,3.59e-10,11;UBERON:0001046,4.60e-09,19 | |||
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| ||
|short_description=p4@HOXB13 | |short_description=p4@HOXB13 | ||
}} | }} |
Latest revision as of 17:47, 15 September 2015
Short description: | p4@HOXB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXB13_5end |
Coexpression cluster: | C2415_prostate_neuroepithelioma_neuroectodermal_rhabdomyosarcoma_Melanocyte_carcinoid_argyrophil |
Association with transcript: | 101bp_to_ENST00000290295_5end |
EntrezGene: | HOXB13 |
HGNC: | 5112 |
UniProt: | Q92826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.54e-11 | 10 |
melanoblast | 4.54e-11 | 10 |
light melanocyte | 4.31e-10 | 3 |
pigment cell | 6.03e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
rectum | 4.68e-16 | 4 |
lower digestive tract | 5.87e-13 | 5 |
large intestine | 3.59e-10 | 11 |
hindgut | 4.60e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.34e-17 | 10 |
germ cell and embryonal cancer | 9.05e-15 | 22 |
germ cell cancer | 9.05e-15 | 22 |
sarcoma | 4.68e-12 | 20 |
cell type cancer | 2.69e-09 | 143 |
gastrointestinal system cancer | 4.30e-08 | 14 |
chondrosarcoma | 6.68e-08 | 1 |
extraosseous chondrosarcoma | 6.68e-08 | 1 |
myxoid chondrosarcoma | 6.68e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 6.68e-08 | 1 |