FFCP PHASE1:Hg19::chr20:4451008..4451026,-: Difference between revisions
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|id=chr20:4451008..4451026,-
|short_description=p@chr20:4451008..4451026,-
|description=CAGE_peak_at_chr20:4451008..4451026,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:4451008..4451026,- | |||
|description=CAGE_peak_at_chr20:4451008..4451026,- | |||
|id=chr20:4451008..4451026,- | |||
|ontology_enrichment_celltype=CL:0002620!1.94e-34!23;CL:0000057!3.22e-26!75;CL:0000055!9.86e-21!180;CL:0002552!1.71e-13!5;CL:0002551!1.12e-07!6;CL:0002556!2.36e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.87e-29;23!CL:0002552;2.61e-11;5!CL:0002551;1.65e-09;6!CL:0000346;3.82e-09;3!CL:1000428;3.82e-09;3!CL:0000057;7.77e-09;73!CL:0002574;1.17e-07;1!CL:0002601;1.29e-07;1!CL:0000228;1.77e-07;1!CL:0002372;1.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.57e-29,23;CL:0000057,1.46e-14,76;CL:0002552,2.86e-11,5;CL:0002551,1.37e-09,6;CL:0000346,3.67e-09,3;CL:1000428,3.67e-09,3;CL:0002574,1.18e-07,1;CL:0002601,1.25e-07,1;CL:0000228,1.42e-07,1;CL:0002372,1.42e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.05e-14!5;DOID:450!3.05e-14!5;DOID:66!3.05e-14!5;DOID:423!3.05e-14!5;DOID:0080000!3.05e-14!5;DOID:11722!3.05e-14!5;DOID:171!6.44e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:17;1.57e-19;5!DOID:450;1.57e-19;5!DOID:66;1.57e-19;5!DOID:423;1.57e-19;5!DOID:0080000;1.57e-19;5!DOID:11722;1.57e-19;5!DOID:171;3.12e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.57e-19,5;DOID:450,1.57e-19,5;DOID:66,1.57e-19,5;DOID:423,1.57e-19,5;DOID:0080000,1.57e-19,5;DOID:11722,1.57e-19,5;DOID:171,2.83e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.28e-28!45;UBERON:0002416!1.28e-28!45;UBERON:0002097!1.36e-27!40;UBERON:0003102!2.11e-27!95;UBERON:0002067!6.51e-11!9;UBERON:0004016!6.51e-11!9;UBERON:0010083!6.51e-11!9;UBERON:0001828!2.74e-08!8;UBERON:0000475!4.10e-08!365;UBERON:0000165!1.57e-07!28;UBERON:0000930!1.57e-07!28;UBERON:0001758!2.36e-07!6;UBERON:0003672!2.36e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.44e-25;4!UBERON:0000923;2.44e-25;4!UBERON:0010316;2.44e-25;4!UBERON:0005291;2.44e-25;4!UBERON:0002050;2.56e-20;5!UBERON:0005423;2.56e-20;5!UBERON:0002097;5.86e-18;41!UBERON:0002067;1.35e-16;9!UBERON:0002199;8.53e-14;46!UBERON:0002416;8.53e-14;46!UBERON:0003102;3.56e-12;50!UBERON:0000412;3.82e-09;3!UBERON:0001992;3.82e-09;3!UBERON:0001828;3.03e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.36e-22,41;UBERON:0002199,2.07e-19,46;UBERON:0002416,2.07e-19,46;UBERON:0002067,1.05e-16,9;UBERON:0004016,1.05e-16,9;UBERON:0010083,1.05e-16,9;UBERON:0003102,7.17e-16,99;UBERON:0000412,3.67e-09,3;UBERON:0001992,3.67e-09,3;UBERON:0001828,3.20e-07,8 | |||
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| ||
|short_description=p@chr20:4451008..4451026,- | |||
}} | }} |
Latest revision as of 14:32, 28 July 2015
Short description: | p@chr20:4451008..4451026, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4451008..4451026, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.57e-29 | 23 |
fibroblast | 1.46e-14 | 76 |
fibroblast of gingiva | 2.86e-11 | 5 |
fibroblast of dermis | 1.37e-09 | 6 |
hair follicle dermal papilla cell | 3.67e-09 | 3 |
stem cell of epidermis | 3.67e-09 | 3 |
stromal cell of pancreas | 1.18e-07 | 1 |
uterine smooth muscle cell | 1.25e-07 | 1 |
multinucleate cell | 1.42e-07 | 1 |
myotube | 1.42e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.36e-22 | 41 |
integument | 2.07e-19 | 46 |
integumental system | 2.07e-19 | 46 |
dermis | 1.05e-16 | 9 |
dermatome | 1.05e-16 | 9 |
future dermis | 1.05e-16 | 9 |
surface structure | 7.17e-16 | 99 |
dermal papilla | 3.67e-09 | 3 |
papillary layer of dermis | 3.67e-09 | 3 |
gingiva | 3.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.57e-19 | 5 |
myotonic disease | 1.57e-19 | 5 |
muscle tissue disease | 1.57e-19 | 5 |
myopathy | 1.57e-19 | 5 |
muscular disease | 1.57e-19 | 5 |
myotonic dystrophy | 1.57e-19 | 5 |
neuroectodermal tumor | 2.83e-10 | 10 |