FFCP PHASE1:Hg19::chr20:45523463..45523535,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:45523463..45523535,+
|short_description=p1@EYA2
|description=CAGE_peak_1_at_EYA2_5end
|association_with_transcript=0bp_to_ENST00000497062_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2139 | |EntrezGene=2139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3520 | |HGNC=3520 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2F5 | |UniProt=F2Z2F5 | ||
|association_with_transcript=0bp_to_ENST00000497062_5end | |||
|cluster_id=chr20:45523463..45523535,+ | |||
|coexpression_cluster_id=C4045 | |||
|description=CAGE_peak_1_at_EYA2_5end | |||
|id=chr20:45523463..45523535,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.87e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.16e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.46e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-34!115;UBERON:0000153!1.79e-21!129;UBERON:0007811!1.79e-21!129;UBERON:0000033!2.30e-20!123;UBERON:0003075!1.26e-19!86;UBERON:0007284!1.26e-19!86;UBERON:0002346!2.13e-17!90;UBERON:0001049!4.32e-17!57;UBERON:0005068!4.32e-17!57;UBERON:0006241!4.32e-17!57;UBERON:0007135!4.32e-17!57;UBERON:0005743!5.06e-16!86;UBERON:0000475!1.46e-15!365;UBERON:0003056!4.31e-15!61;UBERON:0001017!1.05e-14!82;UBERON:0000955!1.36e-14!69;UBERON:0006238!1.36e-14!69;UBERON:0002616!2.33e-14!59;UBERON:0000073!4.81e-14!94;UBERON:0001016!4.81e-14!94;UBERON:0003080!6.10e-13!42;UBERON:0004121!6.33e-13!169;UBERON:0002780!2.45e-12!41;UBERON:0001890!2.45e-12!41;UBERON:0006240!2.45e-12!41;UBERON:0000924!8.54e-12!173;UBERON:0006601!8.54e-12!173;UBERON:0002020!4.41e-10!34;UBERON:0003528!4.41e-10!34;UBERON:0001893!6.43e-10!34;UBERON:0002791!1.26e-09!33;UBERON:0001869!3.79e-09!32;UBERON:0000481!3.47e-08!347;UBERON:0002619!6.41e-08!22;UBERON:0001444!1.82e-07!48;UBERON:0001950!2.93e-07!20;UBERON:0000468!5.76e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.86e-12;114!UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0000073;1.62e-09;53!UBERON:0002616;1.62e-09;53!UBERON:0003528;3.67e-09;34!UBERON:0002020;3.67e-09;34!UBERON:0001893;6.44e-09;34!UBERON:0002791;9.73e-09;32!UBERON:0001869;1.50e-08;32!UBERON:0002619;1.73e-08;22!UBERON:0001017;3.32e-08;75!UBERON:0001950;1.04e-07;20!UBERON:0001016;2.38e-07;83!UBERON:0000955;2.88e-07;68!UBERON:0000956;9.80e-07;25!UBERON:0000203;9.80e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.28e-39,114;UBERON:0003075,8.01e-20,82;UBERON:0007284,8.01e-20,82;UBERON:0002346,8.21e-18,86;UBERON:0001049,3.06e-17,56;UBERON:0005068,3.06e-17,56;UBERON:0006241,3.06e-17,56;UBERON:0007135,3.06e-17,56;UBERON:0003056,8.74e-16,61;UBERON:0001017,1.20e-15,81;UBERON:0000073,2.09e-15,53;UBERON:0002616,2.09e-15,53;UBERON:0000955,2.56e-15,68;UBERON:0006238,2.56e-15,68;UBERON:0011216,1.57e-14,223;UBERON:0001016,4.30e-14,89;UBERON:0002780,3.01e-13,41;UBERON:0001890,3.01e-13,41;UBERON:0003080,3.01e-13,41;UBERON:0006240,3.01e-13,41;UBERON:0010371,3.94e-13,104;UBERON:0010314,4.21e-13,132;UBERON:0004121,8.51e-13,171;UBERON:0000924,8.51e-13,171;UBERON:0006601,8.51e-13,171;UBERON:0003528,1.17e-10,34;UBERON:0002020,1.17e-10,34;UBERON:0001893,1.78e-10,34;UBERON:0002791,1.02e-09,32;UBERON:0001869,1.34e-09,32;UBERON:0002619,2.42e-08,22;UBERON:0001950,1.39e-07,20 | |||
|phase1_expression=17.8044811685145,12.846031433459,19.310753361148,6.00439790118782,5.36353313312745,7.85104671690332,12.6649939084155,1.89515962028049,10.1862394997937,0.491467873003018,0,0,0,4.82688776544182,2.65117900582333,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,12.9138655714038,10.0162719128934,8.81560750713207,0,0,0,15.6301608161418,10.843413076017,3.69754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0.853460445133014,1.60158394814405,1.72425731986345,1.32208974556972,0.954053754535364,1.70763890732835,2.93618594685469,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.15076305659177,1.80719576192283,2.00535164254356,4.05570253090306,0.795285947051099,0.973269740605272,2.83604451492204,2.88248216701333,2.54720878510066,9.2995143603376,1.45718115317017,0.370784442784429,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,8.72188104285069,0,0.12663051166458,0,0.286836620748814,0.709336764396714,2.24271040056923,0,0,0,0,0.163461903113459,1.21085942115945,1.15235184896,7.0296429550139,0,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.368502951935304,1.44656093646072,34.4520828611796,23.4903582814629,0,0,0.168336113954066,0.250237039743928,0,12.2913733846635,16.243853177348,33.8035632539843,0.113432183160021,0.358779271377724,0.640672166455702,0.635795703478686,1.20036438433761,0.309157587715317,4.89517026086695,2.41951913231067,16.3713042274028,9.93857452644226,0.504867548488229,0.0920498986422993,11.3152239773168,0,0,1.86516651541536,0,0,0,0.975789649036763,0.795178609928912,0.580969714347592,2.798848485415,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,3.9313088667105,4.72631925345123,0,0,1.02940686179115,0,0,0,0.277765335475589,6.84197441151682,0,0,3.24605133930215,2.7003999674239,0,0,0,7.90204397959275,4.29243081047436,0.738651018262192,0,0.297262324577456,0.93733833986777,0,0,0,0,0,0,0,0,0.432359860250884,0.75745460055828,0.063497894292169,0,0,3.4214489204541,0,0,0,1.12131084345361,3.48768055066624,0.5867062865676,0.129271715757778,7.15312891703765,0,0,0,7.20180647933998,11.3479305618623,3.46348832720929,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,0,0.958499421966331,6.89171615004683,1.42636905040718,2.60606352001643,1.84928690295345,6.44619467663624,0,0,0,0,5.08189248444927,0,0,1.17261385734044,0,0,0,0,13.7414470725437,15.50528615285,6.78162559249339,0,0,0,0,16.8529815847523,15.9185252839189,15.5209606938757,11.2918351751024,14.933902651878,0,3.32861967686659,5.49029478097369,0,0,0.106727557803444,0,0,0.604780586659361,14.6383606613078,32.9943242569334,14.5943249105198,8.20090555236486,8.69902323413396,2.0911009748669,2.96836132889982,0.925258162815933,1.42049380250502,0.739144404124282,0.519254429183621,0.348631135379878,0,5.01266175758212,5.80110230296147,6.42960909721798,14.0210199365172,20.3242843187107,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,5.89835287767695,3.93617574839647,5.20605431462885,6.4915837338065,1.09883357782012,1.65018999841176,0,0,0,1.25671933779759,0.924291702687866,0.921022048356777,0.137836572484531,1.18162269355101,4.64053420525531,0.681813019328807,1.95870478422822,10.4129496677416,13.4533047155574,22.5874501115414,16.8933494028768,0,0.31481234683064,0,0,0,0.869932992075073,0,0,1.86079184679834,0,0,1.02359116524534,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,3.9353685122798,0,0,0,0,0,0,1.77380532035299,1.26664581178598,5.92730807327823,2.27683904259429,5.59895552391973,5.5808825380797,10.0545341330368,5.44454924306613,4.23647103495506,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,13.4787524930142,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0,7.95318118213038,15.1922969723354,0,0,1.05562704063997,11.1578873420599,4.42054264849836,0,11.6586298052456,10.2160388532688,0,0,0,0,9.9629839693303,0,0,7.75466196876175,8.34912883456661,3.99227596002388,0,0,29.7249825928265,31.5207851750834,0,0,0,0.291604613383254,1.73624994933292,8.85741385813839,14.3509761964235,3.05163472634166,6.63475559587348,2.95547618953547,9.21418668046685,0,5.99522100397994,35.627969687258,0.797594390929008,0.23056390438806,0,2.49888955420619,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,14.9289289661776,8.49192619232056,0.611030144933625,65.8276905670981,55.6037725259263,51.1667552576731,8.62734502152666,5.61804353109152,4.45102446878144,0,30.7193451723381,0,36.6963494649933,1.20990716048664,0.61214552326098,57.8157203600665,2.85614496887536,3.11064574191741,0.664653872707185,0,0,0,0,0,5.90103110339445,0.6859467819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| ||
|short_description=p1@EYA2 | |||
}} | }} |
Latest revision as of 15:22, 16 September 2015
Short description: | p1@EYA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EYA2_5end |
Coexpression cluster: | C4045_neuroblastoma_cord_dura_salivary_seminal_medulloblastoma_small |
Association with transcript: | 0bp_to_ENST00000497062_5end |
EntrezGene: | EYA2 |
HGNC: | 3520 |
UniProt: | F2Z2F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.28e-39 | 114 |
neural plate | 8.01e-20 | 82 |
presumptive neural plate | 8.01e-20 | 82 |
neurectoderm | 8.21e-18 | 86 |
neural tube | 3.06e-17 | 56 |
neural rod | 3.06e-17 | 56 |
future spinal cord | 3.06e-17 | 56 |
neural keel | 3.06e-17 | 56 |
pre-chordal neural plate | 8.74e-16 | 61 |
central nervous system | 1.20e-15 | 81 |
regional part of nervous system | 2.09e-15 | 53 |
regional part of brain | 2.09e-15 | 53 |
brain | 2.56e-15 | 68 |
future brain | 2.56e-15 | 68 |
organ system subdivision | 1.57e-14 | 223 |
nervous system | 4.30e-14 | 89 |
regional part of forebrain | 3.01e-13 | 41 |
forebrain | 3.01e-13 | 41 |
anterior neural tube | 3.01e-13 | 41 |
future forebrain | 3.01e-13 | 41 |
ecto-epithelium | 3.94e-13 | 104 |
structure with developmental contribution from neural crest | 4.21e-13 | 132 |
ectoderm-derived structure | 8.51e-13 | 171 |
ectoderm | 8.51e-13 | 171 |
presumptive ectoderm | 8.51e-13 | 171 |
brain grey matter | 1.17e-10 | 34 |
gray matter | 1.17e-10 | 34 |
telencephalon | 1.78e-10 | 34 |
regional part of telencephalon | 1.02e-09 | 32 |
cerebral hemisphere | 1.34e-09 | 32 |
regional part of cerebral cortex | 2.42e-08 | 22 |
neocortex | 1.39e-07 | 20 |