FFCP PHASE1:Hg19::chr5:118669079..118669097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |EntrezGene=25816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |HGNC=17260 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z713 | |UniProt=B7Z713 | ||
|association_with_transcript=209bp_to_ENST00000513374,uc011cwf.1_5end | |association_with_transcript=209bp_to_ENST00000513374,uc011cwf.1_5end | ||
|cluster_id=chr5:118669079..118669097,+ | |||
|description=CAGE_peak_13_at_TNFAIP8_5end | |description=CAGE_peak_13_at_TNFAIP8_5end | ||
|id=chr5:118669079..118669097,+ | |id=chr5:118669079..118669097,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000838!5.04e-13!52;CL:0002076!3.97e-12!43;CL:0002251!4.80e-09!21;CL:0000223!4.98e-08!59;CL:0000945!5.60e-08!24;CL:0000826!5.60e-08!24;CL:0000084!1.05e-07!25;CL:0000827!1.05e-07!25 | |ontology_enrichment_celltype=CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000838!5.04e-13!52;CL:0002076!3.97e-12!43;CL:0002251!4.80e-09!21;CL:0000223!4.98e-08!59;CL:0000945!5.60e-08!24;CL:0000826!5.60e-08!24;CL:0000084!1.05e-07!25;CL:0000827!1.05e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002251;8.72e-18;20!CL:0002076;2.60e-14;42!CL:0000945;2.18e-08;24!CL:0002621;2.81e-07;3!CL:0002166;4.46e-07;3 | |ontology_enrichment_celltype_v019=CL:0002251;8.72e-18;20!CL:0002076;2.60e-14;42!CL:0000945;2.18e-08;24!CL:0002621;2.81e-07;3!CL:0002166;4.46e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002251,6.39e-18,20;CL:0002076,4.60e-16,42;CL:0000223,9.71e-13,58;CL:0000945,2.05e-08,24;CL:0000826,2.05e-08,24;CL:0002621,2.37e-07,3;CL:0002166,5.61e-07,3;CL:0000838,6.73e-07,52;CL:0000076,8.35e-07,63;CL:0000542,9.79e-07,53;CL:0000051,9.79e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000223;9.01e-07;58 | |ontology_enrichment_development_v019=CL:0000223;9.01e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!2.53e-10!14 | |ontology_enrichment_disease=DOID:1749!2.53e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.17e-25;14 | |ontology_enrichment_disease_v019=DOID:1749;1.17e-25;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.32e-25,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.69e-15!72;UBERON:0000974!5.20e-12!10;UBERON:0000065!1.05e-10!53;UBERON:0000166!5.81e-10!21;UBERON:0004119!7.42e-10!169;UBERON:0000925!7.42e-10!169;UBERON:0006595!7.42e-10!169;UBERON:0003729!3.05e-09!5;UBERON:0000165!6.62e-08!28;UBERON:0000930!6.62e-08!28;UBERON:0003343!1.07e-07!4;UBERON:0004785!1.07e-07!4;UBERON:0006562!1.42e-07!11;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0000161!2.80e-07!35;UBERON:0008814!5.64e-07!15 | |ontology_enrichment_uberon=UBERON:0001004!8.69e-15!72;UBERON:0000974!5.20e-12!10;UBERON:0000065!1.05e-10!53;UBERON:0000166!5.81e-10!21;UBERON:0004119!7.42e-10!169;UBERON:0000925!7.42e-10!169;UBERON:0006595!7.42e-10!169;UBERON:0003729!3.05e-09!5;UBERON:0000165!6.62e-08!28;UBERON:0000930!6.62e-08!28;UBERON:0003343!1.07e-07!4;UBERON:0004785!1.07e-07!4;UBERON:0006562!1.42e-07!11;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0000161!2.80e-07!35;UBERON:0008814!5.64e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000974;5.46e-28;6!UBERON:0003343;1.03e-19;4!UBERON:0004785;1.03e-19;4!UBERON:0003729;2.39e-17;13!UBERON:0000344;6.29e-11;20!UBERON:0000341;4.85e-10;2!UBERON:0000161;1.49e-08;19!UBERON:0000166;1.49e-08;19!UBERON:0000165;1.60e-07;28!UBERON:0001949;2.81e-07;3!UBERON:0001043;5.77e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000974;5.46e-28;6!UBERON:0003343;1.03e-19;4!UBERON:0004785;1.03e-19;4!UBERON:0003729;2.39e-17;13!UBERON:0000344;6.29e-11;20!UBERON:0000341;4.85e-10;2!UBERON:0000161;1.49e-08;19!UBERON:0000166;1.49e-08;19!UBERON:0000165;1.60e-07;28!UBERON:0001949;2.81e-07;3!UBERON:0001043;5.77e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,5.11e-22,10;UBERON:0003343,8.78e-20,4;UBERON:0004785,8.78e-20,4;UBERON:0003729,1.87e-17,13;UBERON:0000344,5.40e-11,20;UBERON:0000341,7.01e-10,2;UBERON:0000153,2.26e-08,62;UBERON:0007811,2.26e-08,62;UBERON:0001949,2.37e-07,3;UBERON:0000166,2.42e-07,22;UBERON:0000165,2.85e-07,29;UBERON:0000930,2.85e-07,29;UBERON:0001043,4.53e-07,3;UBERON:0009143,4.53e-07,3 | |||
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| ||
|short_description=p13@TNFAIP8 | |short_description=p13@TNFAIP8 | ||
}} | }} |
Latest revision as of 21:40, 19 September 2015
Short description: | p13@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNFAIP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 209bp_to_ENST00000513374, uc011cwf.1_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | B7Z713 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 6.39e-18 | 20 |
endo-epithelial cell | 4.60e-16 | 42 |
endodermal cell | 9.71e-13 | 58 |
lymphocyte of B lineage | 2.05e-08 | 24 |
pro-B cell | 2.05e-08 | 24 |
gingival epithelial cell | 2.37e-07 | 3 |
epithelial cell of Malassez | 5.61e-07 | 3 |
lymphoid lineage restricted progenitor cell | 6.73e-07 | 52 |
squamous epithelial cell | 8.35e-07 | 63 |
lymphocyte | 9.79e-07 | 53 |
common lymphoid progenitor | 9.79e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
neck | 5.11e-22 | 10 |
mucosa of oral region | 8.78e-20 | 4 |
respiratory system mucosa | 8.78e-20 | 4 |
mouth mucosa | 1.87e-17 | 13 |
mucosa | 5.40e-11 | 20 |
throat | 7.01e-10 | 2 |
anterior region of body | 2.26e-08 | 62 |
craniocervical region | 2.26e-08 | 62 |
gingival epithelium | 2.37e-07 | 3 |
oral opening | 2.42e-07 | 22 |
mouth | 2.85e-07 | 29 |
stomodeum | 2.85e-07 | 29 |
esophagus | 4.53e-07 | 3 |
esophageal region | 4.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.32e-25 | 14 |