FFCP PHASE1:Hg19::chr20:47804894..47804912,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:47804894..47804912,-
|short_description=p2@STAU1
|description=CAGE_peak_2_at_STAU1_5end
|association_with_transcript=0bp_to_ENST00000340954,ENST0000034745...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6780 | |EntrezGene=6780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11370 | |HGNC=11370 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JW30,Q5JW29,O95793,Q5JW28,B3KRE0,Q6PJX3 | |UniProt=Q5JW30,Q5JW29,O95793,Q5JW28,B3KRE0,Q6PJX3 | ||
|association_with_transcript=0bp_to_ENST00000340954,ENST00000347458,ENST00000360426,ENST00000371792,ENST00000371802,ENST00000371805,ENST00000371828,ENST00000371856,ENST00000437404,NM_001037328,NM_004602,NM_017452,NM_017453,NM_017454,uc002xua.2,uc002xub.2,uc002xuc.2,uc002xud.2,uc002xue.2,uc002xuf.2_5end | |||
|cluster_id=chr20:47804894..47804912,- | |||
|description=CAGE_peak_2_at_STAU1_5end | |||
|id=chr20:47804894..47804912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.41e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!3.14e-14!143;DOID:305!1.25e-09!106;DOID:7!5.65e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.14e-14,143;DOID:305,1.25e-09,106;DOID:7,5.65e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.85e-15!115;UBERON:0000475!6.36e-15!365;UBERON:0000073!5.33e-14!94;UBERON:0001016!5.33e-14!94;UBERON:0002346!1.01e-13!90;UBERON:0003075!2.17e-13!86;UBERON:0007284!2.17e-13!86;UBERON:0005743!4.65e-13!86;UBERON:0001017!4.98e-13!82;UBERON:0000924!1.12e-12!173;UBERON:0006601!1.12e-12!173;UBERON:0001049!2.41e-12!57;UBERON:0005068!2.41e-12!57;UBERON:0006241!2.41e-12!57;UBERON:0007135!2.41e-12!57;UBERON:0004121!2.76e-12!169;UBERON:0000955!4.01e-11!69;UBERON:0006238!4.01e-11!69;UBERON:0000481!1.59e-10!347;UBERON:0000033!2.51e-10!123;UBERON:0005177!4.27e-10!107;UBERON:0002780!5.14e-10!41;UBERON:0001890!5.14e-10!41;UBERON:0006240!5.14e-10!41;UBERON:0002616!5.65e-10!59;UBERON:0003080!9.86e-10!42;UBERON:0001869!1.55e-09!32;UBERON:0002020!1.73e-09!34;UBERON:0003528!1.73e-09!34;UBERON:0003056!1.89e-09!61;UBERON:0001893!1.94e-09!34;UBERON:0002619!2.04e-09!22;UBERON:0000153!3.57e-09!129;UBERON:0007811!3.57e-09!129;UBERON:0002791!4.17e-09!33;UBERON:0001950!8.99e-09!20;UBERON:0000468!9.43e-09!659;UBERON:0000062!1.34e-08!511;UBERON:0000956!6.06e-08!25;UBERON:0000203!6.06e-08!25;UBERON:0000467!1.66e-07!625;UBERON:0002050!2.25e-07!605;UBERON:0005423!2.25e-07!605;UBERON:0000480!2.53e-07!626;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0000922!5.17e-07!612;UBERON:0000949!5.72e-07!45;UBERON:0000119!7.60e-07!312;UBERON:0000483!9.57e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.69e-09;22!UBERON:0001950;7.83e-09;20!UBERON:0001869;9.91e-09;32!UBERON:0003528;1.94e-08;34!UBERON:0002020;1.94e-08;34!UBERON:0001893;2.21e-08;34!UBERON:0002791;3.17e-08;32!UBERON:0000956;5.44e-08;25!UBERON:0000203;5.44e-08;25!UBERON:0002780;1.73e-07;41!UBERON:0001890;1.73e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.75e-15,114;UBERON:0001016,3.69e-14,89;UBERON:0001017,3.08e-13,81;UBERON:0001049,1.28e-12,56;UBERON:0005068,1.28e-12,56;UBERON:0006241,1.28e-12,56;UBERON:0007135,1.28e-12,56;UBERON:0002346,1.67e-12,86;UBERON:0003075,3.60e-12,82;UBERON:0007284,3.60e-12,82;UBERON:0011216,6.67e-12,223;UBERON:0004121,1.52e-11,171;UBERON:0000924,1.52e-11,171;UBERON:0006601,1.52e-11,171;UBERON:0000955,2.48e-11,68;UBERON:0006238,2.48e-11,68;UBERON:0000073,2.51e-11,53;UBERON:0002616,2.51e-11,53;UBERON:0003056,3.88e-10,61;UBERON:0002780,5.14e-10,41;UBERON:0001890,5.14e-10,41;UBERON:0003080,5.14e-10,41;UBERON:0006240,5.14e-10,41;UBERON:0010371,5.45e-10,104;UBERON:0010314,5.52e-10,132;UBERON:0001869,1.55e-09,32;UBERON:0003528,1.73e-09,34;UBERON:0002020,1.73e-09,34;UBERON:0005177,1.86e-09,101;UBERON:0001893,1.94e-09,34;UBERON:0002619,2.04e-09,22;UBERON:0002791,6.44e-09,32;UBERON:0001950,8.99e-09,20;UBERON:0000956,6.06e-08,25;UBERON:0000203,6.06e-08,25;UBERON:0000949,5.72e-07,45 | |||
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|short_description=p2@STAU1 | |||
}} | }} |
Latest revision as of 18:32, 16 September 2015
Short description: | p2@STAU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAU1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340954, ENST00000347458, ENST00000360426, ENST00000371792, ENST00000371802, ENST00000371805, ENST00000371828, ENST00000371856, ENST00000437404, NM_001037328, NM_004602, NM_017452, NM_017453, NM_017454, uc002xua.2, uc002xub.2, uc002xuc.2, uc002xud.2, uc002xue.2, uc002xuf.2_5end |
EntrezGene: | STAU1 |
HGNC: | 11370 |
UniProt: | Q5JW30Q5JW29O95793Q5JW28B3KRE0Q6PJX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.14e-14 | 143 |
carcinoma | 1.25e-09 | 106 |
disease of anatomical entity | 5.65e-07 | 39 |