FFCP PHASE1:Hg19::chr1:202776392..202776436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10765 | |EntrezGene=10765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18039 | |HGNC=18039 | ||
|TSSclassifier=strong | |||
|UniProt=B3KV94,Q9UFD3 | |UniProt=B3KV94,Q9UFD3 | ||
|association_with_transcript=0bp_to_ENST00000235790,uc001gyg.1_5end | |association_with_transcript=0bp_to_ENST00000235790,uc001gyg.1_5end | ||
|cluster_id=chr1:202776392..202776436,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_KDM5B_5end | |description=CAGE_peak_4_at_KDM5B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;2.09e-14;3!CL:1000428;2.09e-14;3!CL:0000097;3.22e-09;5!CL:0002559;3.49e-09;5 | |ontology_enrichment_celltype_v019=CL:0000346;2.09e-14;3!CL:1000428;2.09e-14;3!CL:0000097;3.22e-09;5!CL:0002559;3.49e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.09e-14,3;CL:1000428,2.09e-14,3;CL:0000097,3.22e-09,5;CL:0002028,3.22e-09,5;CL:0002559,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | ||
|ontology_enrichment_disease=DOID:1240!8.60e-12!39;DOID:8692!2.65e-11!31;DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51 | |ontology_enrichment_disease=DOID:1240!8.60e-12!39;DOID:8692!2.65e-11!31;DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000412;2.09e-14;3!UBERON:0001992;2.09e-14;3!UBERON:0002073;3.49e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000412;2.09e-14;3!UBERON:0001992;2.09e-14;3!UBERON:0002073;3.49e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000412,2.09e-14,3;UBERON:0001992,2.09e-14,3;UBERON:0002073,3.49e-09,5;UBERON:0005086,3.49e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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| ||
|short_description=p4@KDM5B | |short_description=p4@KDM5B | ||
}} | }} |
Latest revision as of 20:47, 19 September 2015
Short description: | p4@KDM5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KDM5B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000235790, uc001gyg.1_5end |
EntrezGene: | KDM5B |
HGNC: | 18039 |
UniProt: | B3KV94Q9UFD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.09e-14 | 3 |
stem cell of epidermis | 2.09e-14 | 3 |
mast cell | 3.22e-09 | 5 |
basophil mast progenitor cell | 3.22e-09 | 5 |
hair follicle cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
dermal papilla | 2.09e-14 | 3 |
papillary layer of dermis | 2.09e-14 | 3 |
hair follicle | 3.49e-09 | 5 |
hair follicle placode | 3.49e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |