FFCP PHASE1:Hg19::chr17:48046543..48046575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1748 | |EntrezGene=1748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2917 | |HGNC=2917 | ||
|TSSclassifier=strong | |||
|UniProt=Q92988 | |UniProt=Q92988 | ||
|association_with_transcript=0bp_to_NM_138281,uc002ipv.2_5end | |association_with_transcript=0bp_to_NM_138281,uc002ipv.2_5end | ||
|cluster_id=chr17:48046543..48046575,+ | |||
|description=CAGE_peak_2_at_DLX4_5end | |description=CAGE_peak_2_at_DLX4_5end | ||
|id=chr17:48046543..48046575,+ | |id=chr17:48046543..48046575,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.77e-10!254;CL:0000039!3.05e-08!7;CL:0000586!3.05e-08!7;CL:0002251!8.05e-08!21;CL:0000223!3.80e-07!59 | |ontology_enrichment_celltype=CL:0000066!2.77e-10!254;CL:0000039!3.05e-08!7;CL:0000586!3.05e-08!7;CL:0002251!8.05e-08!21;CL:0000223!3.80e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002563;3.01e-07;4!CL:0000039;3.05e-07;7!CL:0000586;3.05e-07;7!CL:0000123;3.56e-07;2!CL:0000242;3.56e-07;2!CL:0002253;6.59e-07;2 | |ontology_enrichment_celltype_v019=CL:0002563;3.01e-07;4!CL:0000039;3.05e-07;7!CL:0000586;3.05e-07;7!CL:0000123;3.56e-07;2!CL:0000242;3.56e-07;2!CL:0002253;6.59e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.92e-07,4;CL:0000039,2.98e-07,7;CL:0000586,2.98e-07,7;CL:0000242,4.14e-07,2;CL:0002253,6.41e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.88e-46!235;DOID:14566!1.14e-44!239;DOID:0050687!7.92e-41!143;DOID:305!3.21e-36!106;DOID:0050686!2.42e-20!137;DOID:1749!2.86e-10!14;DOID:1325!4.02e-08!7;DOID:3904!4.02e-08!7;DOID:3095!1.04e-07!22;DOID:2994!1.04e-07!22;DOID:3119!1.09e-07!14;DOID:0050615!4.09e-07!16;DOID:170!5.73e-07!6 | |ontology_enrichment_disease=DOID:162!1.88e-46!235;DOID:14566!1.14e-44!239;DOID:0050687!7.92e-41!143;DOID:305!3.21e-36!106;DOID:0050686!2.42e-20!137;DOID:1749!2.86e-10!14;DOID:1325!4.02e-08!7;DOID:3904!4.02e-08!7;DOID:3095!1.04e-07!22;DOID:2994!1.04e-07!22;DOID:3119!1.09e-07!14;DOID:0050615!4.09e-07!16;DOID:170!5.73e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1325;7.14e-13;7!DOID:3904;7.14e-13;7!DOID:3905;3.71e-10;9!DOID:0050615;1.93e-09;16!DOID:1324;9.78e-08;15!DOID:3095;2.40e-07;22!DOID:2994;2.40e-07;22!DOID:3119;2.73e-07;14!DOID:305;6.35e-07;106 | |ontology_enrichment_disease_v019=DOID:1325;7.14e-13;7!DOID:3904;7.14e-13;7!DOID:3905;3.71e-10;9!DOID:0050615;1.93e-09;16!DOID:1324;9.78e-08;15!DOID:3095;2.40e-07;22!DOID:2994;2.40e-07;22!DOID:3119;2.73e-07;14!DOID:305;6.35e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.78e-22,143;DOID:162,2.68e-21,235;DOID:14566,1.40e-20,239;DOID:305,2.63e-15,106;DOID:1325,7.16e-13,7;DOID:3904,7.16e-13,7;DOID:0050686,3.67e-12,137;DOID:3905,3.98e-10,9;DOID:0050615,1.83e-09,16;DOID:1324,9.62e-08,15;DOID:3095,2.47e-07,22;DOID:2994,2.47e-07,22;DOID:3119,2.61e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.83e-10!155;UBERON:0001555!1.83e-10!155;UBERON:0007026!1.83e-10!155;UBERON:0004921!3.48e-10!129;UBERON:0004185!3.48e-10!129;UBERON:0004119!2.63e-09!169;UBERON:0000925!2.63e-09!169;UBERON:0006595!2.63e-09!169;UBERON:0000077!7.01e-09!130;UBERON:0001737!1.20e-08!9;UBERON:0001041!3.71e-08!98;UBERON:0000160!4.24e-08!27;UBERON:0005409!4.56e-08!35;UBERON:0001045!5.98e-08!11;UBERON:0000344!9.43e-08!12;UBERON:0000072!1.03e-07!46;UBERON:0001264!2.63e-07!10;UBERON:0003922!2.63e-07!10;UBERON:0003923!2.63e-07!10;UBERON:0003924!2.63e-07!10;UBERON:0003921!2.63e-07!10;UBERON:0001557!6.74e-07!19;UBERON:0008947!7.07e-07!38;UBERON:0003258!7.07e-07!38 | |ontology_enrichment_uberon=UBERON:0001007!1.83e-10!155;UBERON:0001555!1.83e-10!155;UBERON:0007026!1.83e-10!155;UBERON:0004921!3.48e-10!129;UBERON:0004185!3.48e-10!129;UBERON:0004119!2.63e-09!169;UBERON:0000925!2.63e-09!169;UBERON:0006595!2.63e-09!169;UBERON:0000077!7.01e-09!130;UBERON:0001737!1.20e-08!9;UBERON:0001041!3.71e-08!98;UBERON:0000160!4.24e-08!27;UBERON:0005409!4.56e-08!35;UBERON:0001045!5.98e-08!11;UBERON:0000344!9.43e-08!12;UBERON:0000072!1.03e-07!46;UBERON:0001264!2.63e-07!10;UBERON:0003922!2.63e-07!10;UBERON:0003923!2.63e-07!10;UBERON:0003924!2.63e-07!10;UBERON:0003921!2.63e-07!10;UBERON:0001557!6.74e-07!19;UBERON:0008947!7.07e-07!38;UBERON:0003258!7.07e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.01e-09;10!UBERON:0001242;3.01e-07;4!UBERON:0001262;3.01e-07;4!UBERON:0004786;3.01e-07;4!UBERON:0004808;3.01e-07;4!UBERON:0001277;3.01e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001264;1.01e-09;10!UBERON:0001242;3.01e-07;4!UBERON:0001262;3.01e-07;4!UBERON:0004786;3.01e-07;4!UBERON:0004808;3.01e-07;4!UBERON:0001277;3.01e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,8.60e-10,10;UBERON:0001242,2.92e-07,4;UBERON:0001262,2.92e-07,4;UBERON:0004786,2.92e-07,4;UBERON:0004808,2.92e-07,4;UBERON:0001277,2.92e-07,4 | |||
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| ||
|short_description=p2@DLX4 | |short_description=p2@DLX4 | ||
}} | }} |
Latest revision as of 22:02, 15 September 2015
Short description: | p2@DLX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DLX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_138281, uc002ipv.2_5end |
EntrezGene: | DLX4 |
HGNC: | 2917 |
UniProt: | Q92988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.92e-07 | 4 |
germ line cell | 2.98e-07 | 7 |
germ cell | 2.98e-07 | 7 |
Merkel cell | 4.14e-07 | 2 |
epithelial cell of large intestine | 6.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas | 8.60e-10 | 10 |
intestinal mucosa | 2.92e-07 | 4 |
wall of intestine | 2.92e-07 | 4 |
gastrointestinal system mucosa | 2.92e-07 | 4 |
gastrointestinal system epithelium | 2.92e-07 | 4 |
intestinal epithelium | 2.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.78e-22 | 143 |
cancer | 2.68e-21 | 235 |
disease of cellular proliferation | 1.40e-20 | 239 |
carcinoma | 2.63e-15 | 106 |
bronchus cancer | 7.16e-13 | 7 |
bronchogenic carcinoma | 7.16e-13 | 7 |
organ system cancer | 3.67e-12 | 137 |
lung carcinoma | 3.98e-10 | 9 |
respiratory system cancer | 1.83e-09 | 16 |
lung cancer | 9.62e-08 | 15 |
germ cell and embryonal cancer | 2.47e-07 | 22 |
germ cell cancer | 2.47e-07 | 22 |
gastrointestinal system cancer | 2.61e-07 | 14 |