FFCP PHASE1:Hg19::chr12:93096759..93096770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338809 | |EntrezGene=338809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27887 | |HGNC=27887 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4P0 | |UniProt=F5H4P0 | ||
|association_with_transcript=-33bp_to_ENST00000544406_5end | |association_with_transcript=-33bp_to_ENST00000544406_5end | ||
|cluster_id=chr12:93096759..93096770,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_1_at_C12orf74_5end | |description=CAGE_peak_1_at_C12orf74_5end | ||
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|ontology_enrichment_celltype=CL:0000945!2.70e-33!24;CL:0000826!2.70e-33!24;CL:0000236!3.23e-29!14;CL:0000542!7.01e-15!53;CL:0000051!7.01e-15!53;CL:0000838!8.82e-14!52;CL:0000738!8.17e-08!140;CL:0002087!2.23e-07!119;CL:0000842!2.44e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.70e-33!24;CL:0000826!2.70e-33!24;CL:0000236!3.23e-29!14;CL:0000542!7.01e-15!53;CL:0000051!7.01e-15!53;CL:0000838!8.82e-14!52;CL:0000738!8.17e-08!140;CL:0002087!2.23e-07!119;CL:0000842!2.44e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.11e-73;13!CL:0000945;1.93e-46;24!CL:0000542;2.07e-15;53 | |ontology_enrichment_celltype_v019=CL:0000236;1.11e-73;13!CL:0000945;1.93e-46;24!CL:0000542;2.07e-15;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.00e-68,14;CL:0000945,1.64e-46,24;CL:0000826,1.64e-46,24;CL:0000838,2.23e-20,52;CL:0000542,5.92e-20,53;CL:0000051,5.92e-20,53;CL:0002087,5.49e-08,115;CL:0002031,1.43e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.83e-16;2!CL:0000051;2.07e-15;53!UBERON:0001045;1.62e-09;1 | |ontology_enrichment_development_v019=UBERON:0006965;1.83e-16;2!CL:0000051;2.07e-15;53!UBERON:0001045;1.62e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;4.32e-09;1!DOID:0050177;4.32e-09;1!DOID:0050427;4.32e-09;1 | |ontology_enrichment_disease_v019=DOID:630;4.32e-09;1!DOID:0050177;4.32e-09;1!DOID:0050427;4.32e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,4.50e-09,1;DOID:0050177,4.50e-09,1;DOID:0050427,4.50e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.71e-09!115;UBERON:0006947!2.57e-08!3;UBERON:0004054!2.57e-08!3;UBERON:0002106!2.33e-07!3;UBERON:0004854!2.33e-07!3;UBERON:0009034!2.33e-07!3;UBERON:0002095!2.33e-07!3;UBERON:0004782!2.33e-07!3;UBERON:0003281!2.33e-07!3;UBERON:0009664!2.33e-07!3;UBERON:0002296!2.33e-07!3;UBERON:0005602!2.33e-07!3;UBERON:0001179!2.33e-07!3;UBERON:0006293!2.33e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!9.71e-09!115;UBERON:0006947!2.57e-08!3;UBERON:0004054!2.57e-08!3;UBERON:0002106!2.33e-07!3;UBERON:0004854!2.33e-07!3;UBERON:0009034!2.33e-07!3;UBERON:0002095!2.33e-07!3;UBERON:0004782!2.33e-07!3;UBERON:0003281!2.33e-07!3;UBERON:0009664!2.33e-07!3;UBERON:0002296!2.33e-07!3;UBERON:0005602!2.33e-07!3;UBERON:0001179!2.33e-07!3;UBERON:0006293!2.33e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.01e-16;2!UBERON:0006947;1.82e-11;3!UBERON:0004054;1.82e-11;3!UBERON:0001154;1.62e-09;1!UBERON:0001153;1.62e-09;1!UBERON:0009854;1.62e-09;1!UBERON:0002372;2.35e-09;1!UBERON:0001301;2.35e-09;1!UBERON:0002171;2.35e-09;1!UBERON:0001961;2.35e-09;1!UBERON:0001744;2.35e-09;1!UBERON:0006518;2.35e-09;1!UBERON:0008949;2.35e-09;1!UBERON:0000101;2.35e-09;1!UBERON:0001042;2.35e-09;1!UBERON:0002167;2.35e-09;1!UBERON:0001735;2.35e-09;1!UBERON:0001000;4.32e-09;1!UBERON:0005352;4.32e-09;1!UBERON:0005904;8.05e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0006562;1.01e-16;2!UBERON:0006947;1.82e-11;3!UBERON:0004054;1.82e-11;3!UBERON:0001154;1.62e-09;1!UBERON:0001153;1.62e-09;1!UBERON:0009854;1.62e-09;1!UBERON:0002372;2.35e-09;1!UBERON:0001301;2.35e-09;1!UBERON:0002171;2.35e-09;1!UBERON:0001961;2.35e-09;1!UBERON:0001744;2.35e-09;1!UBERON:0006518;2.35e-09;1!UBERON:0008949;2.35e-09;1!UBERON:0000101;2.35e-09;1!UBERON:0001042;2.35e-09;1!UBERON:0002167;2.35e-09;1!UBERON:0001735;2.35e-09;1!UBERON:0001000;4.32e-09;1!UBERON:0005352;4.32e-09;1!UBERON:0005904;8.05e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.87e-11,3;UBERON:0004054,1.87e-11,3;UBERON:0001154,1.69e-09,1;UBERON:0001153,1.69e-09,1;UBERON:0001045,1.69e-09,1;UBERON:0001301,1.99e-09,1;UBERON:0002171,2.16e-09,1;UBERON:0006518,2.16e-09,1;UBERON:0008949,2.16e-09,1;UBERON:0000101,2.16e-09,1;UBERON:0002167,2.16e-09,1;UBERON:0002372,2.55e-09,1;UBERON:0001961,2.55e-09,1;UBERON:0001744,2.55e-09,1;UBERON:0001735,2.55e-09,1;UBERON:0001000,5.28e-09,1;UBERON:0005352,5.28e-09,1;UBERON:0005904,8.21e-09,4 | |||
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| ||
|short_description=p1@C12orf74 | |short_description=p1@C12orf74 | ||
}} | }} |
Latest revision as of 23:27, 15 September 2015
Short description: | p1@C12orf74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf74_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -33bp_to_ENST00000544406_5end |
EntrezGene: | C12orf74 |
HGNC: | 27887 |
UniProt: | F5H4P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.00e-68 | 14 |
lymphocyte of B lineage | 1.64e-46 | 24 |
pro-B cell | 1.64e-46 | 24 |
lymphoid lineage restricted progenitor cell | 2.23e-20 | 52 |
lymphocyte | 5.92e-20 | 53 |
common lymphoid progenitor | 5.92e-20 | 53 |
nongranular leukocyte | 5.49e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.43e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.87e-11 | 3 |
internal male genitalia | 1.87e-11 | 3 |
vermiform appendix | 1.69e-09 | 1 |
caecum | 1.69e-09 | 1 |
midgut | 1.69e-09 | 1 |
epididymis | 1.99e-09 | 1 |
lower lobe of right lung | 2.16e-09 | 1 |
right lung lobe | 2.16e-09 | 1 |
lower lobe of lung | 2.16e-09 | 1 |
lobe of lung | 2.16e-09 | 1 |
right lung | 2.16e-09 | 1 |
tonsil | 2.55e-09 | 1 |
mucosa-associated lymphoid tissue | 2.55e-09 | 1 |
lymphoid tissue | 2.55e-09 | 1 |
tonsillar ring | 2.55e-09 | 1 |
vas deferens | 5.28e-09 | 1 |
spermatic cord | 5.28e-09 | 1 |
duct of male reproductive system | 8.21e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.50e-09 | 1 |
monogenic disease | 4.50e-09 | 1 |
xeroderma pigmentosum | 4.50e-09 | 1 |