FFCP PHASE1:Hg19::chr21:10990888..10990902,-: Difference between revisions
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|id=chr21:10990888..10990902,-
|short_description=p2@TPTE
|description=CAGE_peak_2_at_TPTE_5end
|association_with_transcript=-5bp_to_ENST00000328758_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7179 | |EntrezGene=7179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12023 | |HGNC=12023 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUN1 | |UniProt=C9JUN1 | ||
|association_with_transcript=-5bp_to_ENST00000328758_5end | |||
|cluster_id=chr21:10990888..10990902,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_TPTE_5end | |||
|id=chr21:10990888..10990902,- | |||
|ontology_enrichment_celltype=CL:0000039!3.13e-36!7;CL:0000586!3.13e-36!7;CL:0002541!3.93e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.52e-45;7!CL:0000586;3.52e-45;7!CL:0000054;3.89e-11;2!CL:0000137;3.89e-11;2!CL:0000092;3.89e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.50e-45,7;CL:0000586,2.50e-45,7;CL:0000054,4.09e-11,2;CL:0000137,4.09e-11,2;CL:0000092,4.09e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.70e-49;10!UBERON:0005564;1.70e-49;10 | |||
|ontology_enrichment_disease=DOID:3095!4.10e-15!22;DOID:2994!4.10e-15!22;DOID:0060085!1.75e-08!1;DOID:3165!1.75e-08!1;DOID:0060121!1.75e-08!1;DOID:2438!1.75e-08!1;DOID:4418!1.75e-08!1;DOID:1799!2.17e-08!1;DOID:10165!2.17e-08!1;DOID:1798!2.17e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.50e-22;22!DOID:2994;1.50e-22;22!DOID:0060085;6.98e-21;1!DOID:3165;6.98e-21;1!DOID:0060121;6.98e-21;1!DOID:2438;6.98e-21;1!DOID:4418;6.98e-21;1!DOID:200;3.89e-11;2!DOID:4305;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.38e-22,22;DOID:2994,1.38e-22,22;DOID:0060085,7.72e-21,1;DOID:3165,7.72e-21,1;DOID:0060121,7.72e-21,1;DOID:2438,7.72e-21,1;DOID:4418,7.72e-21,1;DOID:200,4.09e-11,2;DOID:4305,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.08e-32!8;UBERON:0003135!3.63e-23!11;UBERON:0002046!8.48e-13!5;UBERON:0004117!8.48e-13!5;UBERON:0007689!8.48e-13!5;UBERON:0007123!8.48e-13!5;UBERON:0003091!8.48e-13!5;UBERON:0000991!6.88e-12!21;UBERON:0009196!6.88e-12!21;UBERON:0009117!6.88e-12!21;UBERON:0005564!6.88e-12!21;UBERON:0004176!2.53e-11!22;UBERON:0003101!2.53e-11!22;UBERON:0000079!2.53e-11!22;UBERON:0000476!3.93e-10!3;UBERON:0000920!3.93e-10!3;UBERON:0003124!2.51e-09!7;UBERON:0002323!8.02e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.35e-62;8!UBERON:0003135;4.90e-45;11!UBERON:0000991;9.39e-24;21!UBERON:0003101;1.10e-22;22!UBERON:0000079;1.10e-22;22!UBERON:0002323;5.47e-09;45!UBERON:0003133;5.39e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.41e-62,8;UBERON:0003135,3.73e-45,11;UBERON:0000991,8.15e-24,21;UBERON:0009196,8.15e-24,21;UBERON:0009117,8.15e-24,21;UBERON:0005564,8.15e-24,21;UBERON:0004176,9.57e-23,22;UBERON:0003101,9.57e-23,22;UBERON:0000079,9.57e-23,22;UBERON:0002323,5.67e-11,46;UBERON:0003133,1.61e-10,48;UBERON:0004458,2.62e-10,49;UBERON:0003886,2.31e-09,54;UBERON:0005156,1.42e-08,59;UBERON:0000990,1.42e-08,59;UBERON:0002553,2.70e-08,61 | |||
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|short_description=p2@TPTE | |||
}} | }} |
Latest revision as of 17:53, 17 September 2015
Short description: | p2@TPTE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPTE_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -5bp_to_ENST00000328758_5end |
EntrezGene: | TPTE |
HGNC: | 12023 |
UniProt: | C9JUN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.50e-45 | 7 |
germ cell | 2.50e-45 | 7 |
bone matrix secreting cell | 4.09e-11 | 2 |
osteocyte | 4.09e-11 | 2 |
osteoclast | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 6.41e-62 | 8 |
male reproductive organ | 3.73e-45 | 11 |
gonad | 8.15e-24 | 21 |
indifferent external genitalia | 8.15e-24 | 21 |
indifferent gonad | 8.15e-24 | 21 |
gonad primordium | 8.15e-24 | 21 |
external genitalia | 9.57e-23 | 22 |
male organism | 9.57e-23 | 22 |
male reproductive system | 9.57e-23 | 22 |
body cavity | 5.67e-11 | 46 |
reproductive organ | 1.61e-10 | 48 |
body cavity or lining | 2.62e-10 | 49 |
body cavity precursor | 2.31e-09 | 54 |
reproductive structure | 1.42e-08 | 59 |
reproductive system | 1.42e-08 | 59 |
anatomical cavity | 2.70e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.38e-22 | 22 |
germ cell cancer | 1.38e-22 | 22 |
organ system benign neoplasm | 7.72e-21 | 1 |
skin benign neoplasm | 7.72e-21 | 1 |
integumentary system benign neoplasm | 7.72e-21 | 1 |
dermis tumor | 7.72e-21 | 1 |
cutaneous fibrous histiocytoma | 7.72e-21 | 1 |
giant cell tumor | 4.09e-11 | 2 |
bone giant cell tumor | 4.09e-11 | 2 |