FFCP PHASE1:Hg19::chr10:49701686..49701697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000417247,uc001jgs.2_5end | |association_with_transcript=0bp_to_ENST00000417247,uc001jgs.2_5end | ||
|cluster_id=chr10:49701686..49701697,- | |||
|description=CAGE_peak_13_at_ARHGAP22_5end | |description=CAGE_peak_13_at_ARHGAP22_5end | ||
|id=chr10:49701686..49701697,- | |id=chr10:49701686..49701697,- | ||
|ontology_enrichment_celltype=CL:0000763!1.82e-19!112;CL:0000049!1.82e-19!112;CL:0000990!7.29e-16!8;CL:0000037!1.02e-13!172;CL:0000566!1.02e-13!172;CL:0000451!7.35e-13!10;CL:0000988!1.39e-12!182;CL:0002032!3.08e-12!165;CL:0000837!3.08e-12!165;CL:0000453!1.30e-07!5;CL:0000840!6.20e-07!5;CL:0001029!6.20e-07!5 | |ontology_enrichment_celltype=CL:0000763!1.82e-19!112;CL:0000049!1.82e-19!112;CL:0000990!7.29e-16!8;CL:0000037!1.02e-13!172;CL:0000566!1.02e-13!172;CL:0000451!7.35e-13!10;CL:0000988!1.39e-12!182;CL:0002032!3.08e-12!165;CL:0000837!3.08e-12!165;CL:0000453!1.30e-07!5;CL:0000840!6.20e-07!5;CL:0001029!6.20e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000840;2.03e-15;5!CL:0000037;1.97e-11;1!CL:0001024;1.97e-11;1!CL:0000990;1.80e-10;8!CL:0000451;1.16e-08;10 | |ontology_enrichment_celltype_v019=CL:0000840;2.03e-15;5!CL:0000037;1.97e-11;1!CL:0001024;1.97e-11;1!CL:0000990;1.80e-10;8!CL:0000451;1.16e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.43e-15,5;CL:0001029,1.43e-15,5;CL:0001024,1.78e-11,1;CL:0000990,1.43e-10,8;CL:0000763,1.48e-09,108;CL:0000049,1.48e-09,108;CL:0000451,9.63e-09,10;CL:0000037,9.60e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.81e-11;1!UBERON:0006298;3.81e-11;1 | |ontology_enrichment_development_v019=UBERON:0001045;3.81e-11;1!UBERON:0006298;3.81e-11;1 | ||
|ontology_enrichment_disease=DOID:8692!3.55e-38!31;DOID:1240!2.02e-29!39;DOID:2531!1.90e-21!51;DOID:0060083!1.90e-21!51;DOID:1036!5.94e-12!8 | |ontology_enrichment_disease=DOID:8692!3.55e-38!31;DOID:1240!2.02e-29!39;DOID:2531!1.90e-21!51;DOID:0060083!1.90e-21!51;DOID:1036!5.94e-12!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.98e-19;31!DOID:1240;6.16e-13;39!DOID:2531;3.30e-10;51!DOID:0060083;3.30e-10;51 | |ontology_enrichment_disease_v019=DOID:8692;8.98e-19;31!DOID:1240;6.16e-13;39!DOID:2531;3.30e-10;51!DOID:0060083;3.30e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,5.49e-20,31;DOID:1240,1.06e-15,39;DOID:2531,8.79e-12,51;DOID:0060083,8.79e-12,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.81e-11;1!UBERON:0001736;3.81e-11;1!UBERON:0001153;3.81e-11;1!UBERON:0009854;3.81e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0001154;3.81e-11;1!UBERON:0001736;3.81e-11;1!UBERON:0001153;3.81e-11;1!UBERON:0009854;3.81e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.28e-11,1;UBERON:0006298,3.28e-11,1;UBERON:0001154,5.43e-11,1;UBERON:0001153,5.43e-11,1;UBERON:0001045,5.43e-11,1 | |||
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| ||
|short_description=p13@ARHGAP22 | |short_description=p13@ARHGAP22 | ||
}} | }} |
Latest revision as of 09:07, 18 September 2015
Short description: | p13@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ARHGAP22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417247, uc001jgs.2_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.43e-15 | 5 |
common dendritic progenitor | 1.43e-15 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.78e-11 | 1 |
conventional dendritic cell | 1.43e-10 | 8 |
myeloid cell | 1.48e-09 | 108 |
common myeloid progenitor | 1.48e-09 | 108 |
dendritic cell | 9.63e-09 | 10 |
hematopoietic stem cell | 9.60e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.28e-11 | 1 |
submandibular gland primordium | 3.28e-11 | 1 |
vermiform appendix | 5.43e-11 | 1 |
caecum | 5.43e-11 | 1 |
midgut | 5.43e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.49e-20 | 31 |
leukemia | 1.06e-15 | 39 |
hematologic cancer | 8.79e-12 | 51 |
immune system cancer | 8.79e-12 | 51 |