FFCP PHASE1:Hg19::chr8:22844879..22844887,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23221 | |EntrezGene=23221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18756 | |HGNC=18756 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | |UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | ||
|association_with_transcript=-42bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | |association_with_transcript=-42bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | ||
|cluster_id=chr8:22844879..22844887,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_29_at_RHOBTB2_5end | |description=CAGE_peak_29_at_RHOBTB2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!7.16e-13!7;CL:0000586!7.16e-13!7;CL:0002537!9.36e-09!5 | |ontology_enrichment_celltype=CL:0000039!7.16e-13!7;CL:0000586!7.16e-13!7;CL:0002537!9.36e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.65e-15;7!CL:0000586;1.65e-15;7 | |ontology_enrichment_celltype_v019=CL:0000039;1.65e-15;7!CL:0000586;1.65e-15;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.55e-98;1!UBERON:0007297;4.52e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | |ontology_enrichment_development_v019=UBERON:0005754;2.55e-98;1!UBERON:0007297;4.52e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | ||
|ontology_enrichment_disease=DOID:1799!3.08e-11!1;DOID:10165!3.08e-11!1;DOID:1798!3.08e-11!1 | |ontology_enrichment_disease=DOID:1799!3.08e-11!1;DOID:10165!3.08e-11!1;DOID:1798!3.08e-11!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000998!2.79e-11!1;UBERON:0006868!2.79e-11!1 | |ontology_enrichment_uberon=UBERON:0000998!2.79e-11!1;UBERON:0006868!2.79e-11!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.55e-98;1!UBERON:0006868;2.55e-98;1!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000473;1.07e-13;8!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11!UBERON:0003937;1.33e-09;12!UBERON:0005399;1.33e-09;12 | |ontology_enrichment_uberon_v019=UBERON:0000998;2.55e-98;1!UBERON:0006868;2.55e-98;1!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000473;1.07e-13;8!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11!UBERON:0003937;1.33e-09;12!UBERON:0005399;1.33e-09;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.55e-98,1;UBERON:0006868,2.55e-98,1;UBERON:0006947,5.96e-34,3;UBERON:0004054,5.96e-34,3;UBERON:0005904,7.14e-26,4;UBERON:0000473,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0003937,1.33e-09,12;UBERON:0005399,1.33e-09,12;UBERON:0003887,1.33e-09,12 | |||
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|short_description=p29@RHOBTB2 | |short_description=p29@RHOBTB2 | ||
}} | }} |
Latest revision as of 12:59, 17 September 2015
Short description: | p29@RHOBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_RHOBTB2_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -42bp_to_ENST00000519685, NM_001160036, uc003xcp.2_5end |
EntrezGene: | RHOBTB2 |
HGNC: | 18756 |
UniProt: | E9PBU2A8K9Z8Q9BYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.55e-98 | 1 |
seminal fluid secreting gland | 2.55e-98 | 1 |
male genital duct | 5.96e-34 | 3 |
internal male genitalia | 5.96e-34 | 3 |
duct of male reproductive system | 7.14e-26 | 4 |
testis | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
sex gland | 1.33e-09 | 12 |
male reproductive gland | 1.33e-09 | 12 |
intraembryonic coelom | 1.33e-09 | 12 |