FFCP PHASE1:Hg19::chr2:149863676..149863719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:149863676..149863719,+ | |||
|coexpression_cluster_id=C541 | |coexpression_cluster_id=C541 | ||
|description=CAGE_peak_at_chr2:149863676..149863719,+ | |description=CAGE_peak_at_chr2:149863676..149863719,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1001319!5.43e-11!1;CL:1000600!5.43e-11!1 | |ontology_enrichment_celltype=CL:1001319!5.43e-11!1;CL:1000600!5.43e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.14e-26;4 | |ontology_enrichment_celltype_v019=CL:0002327;7.14e-26;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.55e-98;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.55e-98;1 | ||
|ontology_enrichment_disease=DOID:5093!8.69e-24!4;DOID:1612!8.69e-24!4;DOID:630!1.18e-11!1;DOID:0050177!1.18e-11!1;DOID:0050427!1.18e-11!1 | |ontology_enrichment_disease=DOID:5093!8.69e-24!4;DOID:1612!8.69e-24!4;DOID:630!1.18e-11!1;DOID:0050177!1.18e-11!1;DOID:0050427!1.18e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;7.14e-26;4!DOID:1612;7.14e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |ontology_enrichment_disease_v019=DOID:5093;7.14e-26;4!DOID:1612;7.14e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,7.14e-26,4;DOID:1612,7.14e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001255!8.62e-21!2;UBERON:0001556!8.62e-21!2;UBERON:0006331!3.39e-14!3;UBERON:0003112!1.97e-11!1;UBERON:0000032!1.97e-11!1;UBERON:0005253!1.97e-11!1;UBERON:0003128!1.97e-11!1;UBERON:0002241!1.97e-11!1;UBERON:0001703!1.97e-11!1;UBERON:0004761!1.97e-11!1;UBERON:0009617!1.97e-11!1;UBERON:0002038!2.42e-11!1;UBERON:0009661!2.42e-11!1;UBERON:0004645!5.43e-11!1;UBERON:0001256!5.43e-11!1;UBERON:0001259!5.43e-11!1;UBERON:0002420!1.74e-10!9;UBERON:0007245!1.74e-10!9;UBERON:0010009!1.74e-10!9;UBERON:0010011!1.74e-10!9;UBERON:0000454!1.74e-10!9;UBERON:0002308!1.86e-10!9;UBERON:0000125!1.86e-10!9;UBERON:0000310!7.31e-10!10;UBERON:0001443!5.19e-09!11;UBERON:0002020!6.05e-07!34;UBERON:0003528!6.05e-07!34;UBERON:0000162!7.28e-07!14;UBERON:0001353!7.28e-07!14;UBERON:0000163!7.28e-07!14;UBERON:0006866!7.28e-07!14;UBERON:0000164!7.28e-07!14;UBERON:0000931!7.28e-07!14 | |ontology_enrichment_uberon=UBERON:0001255!8.62e-21!2;UBERON:0001556!8.62e-21!2;UBERON:0006331!3.39e-14!3;UBERON:0003112!1.97e-11!1;UBERON:0000032!1.97e-11!1;UBERON:0005253!1.97e-11!1;UBERON:0003128!1.97e-11!1;UBERON:0002241!1.97e-11!1;UBERON:0001703!1.97e-11!1;UBERON:0004761!1.97e-11!1;UBERON:0009617!1.97e-11!1;UBERON:0002038!2.42e-11!1;UBERON:0009661!2.42e-11!1;UBERON:0004645!5.43e-11!1;UBERON:0001256!5.43e-11!1;UBERON:0001259!5.43e-11!1;UBERON:0002420!1.74e-10!9;UBERON:0007245!1.74e-10!9;UBERON:0010009!1.74e-10!9;UBERON:0010011!1.74e-10!9;UBERON:0000454!1.74e-10!9;UBERON:0002308!1.86e-10!9;UBERON:0000125!1.86e-10!9;UBERON:0000310!7.31e-10!10;UBERON:0001443!5.19e-09!11;UBERON:0002020!6.05e-07!34;UBERON:0003528!6.05e-07!34;UBERON:0000162!7.28e-07!14;UBERON:0001353!7.28e-07!14;UBERON:0000163!7.28e-07!14;UBERON:0006866!7.28e-07!14;UBERON:0000164!7.28e-07!14;UBERON:0000931!7.28e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.14e-26;4!UBERON:0000310;3.02e-11;10!UBERON:0001443;2.37e-10;11 | |ontology_enrichment_uberon_v019=UBERON:0001911;7.14e-26;4!UBERON:0000310;3.02e-11;10!UBERON:0001443;2.37e-10;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.14e-26,4;UBERON:0005333,7.14e-26,4;UBERON:0008425,7.14e-26,4;UBERON:0005311,7.14e-26,4;UBERON:0000076,1.07e-13,8;UBERON:0005153,5.76e-12,37;UBERON:0000310,3.02e-11,10;UBERON:0001443,2.37e-10,11;UBERON:0005157,1.08e-09,47;UBERON:0000915,6.99e-09,52 | |||
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|short_description=p@chr2:149863676..149863719,+ | |short_description=p@chr2:149863676..149863719,+ | ||
}} | }} |
Latest revision as of 01:11, 29 July 2015
Short description: | p@chr2:149863676..149863719, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:149863676..149863719, + |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.14e-26 | 4 |
mammary bud | 7.14e-26 | 4 |
mammary ridge | 7.14e-26 | 4 |
mammary placode | 7.14e-26 | 4 |
external ectoderm | 1.07e-13 | 8 |
epithelial bud | 5.76e-12 | 37 |
breast | 3.02e-11 | 10 |
chest | 2.37e-10 | 11 |
epithelial fold | 1.08e-09 | 47 |
thoracic segment of trunk | 6.99e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.14e-26 | 4 |
breast cancer | 7.14e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |