FFCP PHASE1:Hg19::chr21:38071403..38071428,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:38071403..38071428,+
|short_description=p2@SIM2
|description=CAGE_peak_2_at_SIM2_5end
|association_with_transcript=-4bp_to_ENST00000460783_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6493 | |EntrezGene=6493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10883 | |HGNC=10883 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000460783_5end | |||
|cluster_id=chr21:38071403..38071428,+ | |||
|coexpression_cluster_id=C2630 | |||
|description=CAGE_peak_2_at_SIM2_5end | |||
|id=chr21:38071403..38071428,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.14e-17!254;CL:1000507!1.12e-07!12;CL:1000494!1.12e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.27e-10;10!CL:1000494;2.27e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.85e-18,253;CL:1000507,1.99e-10,10;CL:1000494,1.99e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.16e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.65e-36!143;DOID:305!4.87e-32!106;DOID:162!9.31e-29!235;DOID:14566!4.15e-27!239;DOID:299!1.15e-12!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.03e-10;25!DOID:305;2.16e-09;106!DOID:3119;1.72e-07;14!DOID:0050687;8.26e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.65e-32,143;DOID:305,4.96e-31,106;DOID:162,2.23e-28,235;DOID:14566,3.65e-27,239;DOID:299,5.36e-10,25;DOID:3119,1.72e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003104!8.05e-14!238;UBERON:0009142!8.05e-14!238;UBERON:0000481!1.31e-10!347;UBERON:0005177!8.53e-09!107;UBERON:0002100!1.52e-08!216;UBERON:0009773!1.12e-07!12;UBERON:0001231!1.12e-07!12;UBERON:0004810!1.12e-07!12;UBERON:0002113!1.13e-07!27;UBERON:0003918!1.13e-07!27;UBERON:0005095!1.13e-07!27;UBERON:0007687!1.13e-07!27;UBERON:0001737!4.55e-07!9;UBERON:0000072!8.48e-07!46;UBERON:0001041!9.35e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.27e-10;10!UBERON:0009773;2.27e-10;10!UBERON:0001231;2.27e-10;10!UBERON:0004810;2.27e-10;10!UBERON:0001737;5.90e-10;9!UBERON:0001557;5.90e-10;9!UBERON:0002113;1.96e-09;24!UBERON:0011143;1.96e-09;24!UBERON:0000489;2.48e-08;29!UBERON:0006554;6.66e-08;30!UBERON:0001008;6.66e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.99e-10,10;UBERON:0005177,2.77e-10,101;UBERON:0001737,4.68e-10,9;UBERON:0001557,1.06e-08,19;UBERON:0002113,2.16e-08,26;UBERON:0003918,2.16e-08,26;UBERON:0011143,2.16e-08,26;UBERON:0005095,2.16e-08,26;UBERON:0007687,2.16e-08,26;UBERON:0002100,3.36e-08,199;UBERON:0000072,7.41e-08,47;UBERON:0006554,1.21e-07,47;UBERON:0000489,1.61e-07,31;UBERON:0001008,2.32e-07,48;UBERON:0005172,3.82e-07,54;UBERON:0005173,3.82e-07,54;UBERON:0001007,6.23e-07,145;UBERON:0001555,6.23e-07,145;UBERON:0007026,6.23e-07,145;UBERON:0001041,7.69e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,1.60896258848061,0.662794751455832,8.0679017574213,7.8350288643117,6.57279081348636,6.34312638427659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.15877215168659,0.795285947051099,1.45990461090791,0,0,0.175669571386252,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,6.33152558322899,0.264818361626438,0,0,0,8.5399196583764,4.44001587150888,0,0,0,0,0,0.234321431833797,0,0,0,0.587172493218824,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,1.0126579934476,0.389748020644795,0,0,0,0,0,0,0,0,1.72082757233402,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,3.54920400119532,2.69735504124963,1.20505514941741,2.20587945464788,3.05031221729369,2.60997681022206,2.96628877952362,2.5508790466295,1.53898862778556,0,1.40241773803446,0,0,0,0,0,0,0.737930631258681,0,0,0,0,2.22212268380471,0,0,0,0,0,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,0.500170521059677,0.542530047399471,0,0,0,0,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0.532685175939381,0,0,0,1.69203229428271,1.00253235151642,4.05156351317944,0,0,0,5.41439535488894,2.46449078734127,7.84349769176855,2.92278449306521,3.0609972378934,0,0,0.215915916102139,0,0.270946437543853,2.50844886927427,3.56826782263054,4.15538004464362,5.59686886805446,0,0,0,0,0,0,0,0,0,0,0,3.48014585851639,0.308097234229289,0,0.551346289938122,0,0,0.170453254832202,0.890320356467374,0,0.192190067365106,0,0.10115778085555,0,0,0,0.308033580176089,2.66153015158511,0,0.55597265731176,1.00187420719394,0.372158369359667,0.316379424718726,0,1.535386747868,2.1396949401696,0,0.78494864019923,0,0,0.235624804691373,5.45892700247953,0,0.842516912477962,0,17.0599442741899,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0,0,0,2.11107635297664,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,1.92495971052672,1.47024129588619,0,0,0,0,0,0,0,2.59697552219644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0.146508179271894,2.79129200023881,0,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0.211125408127993,0,0,0,1.32949287252801,0,0,1.3480252672099,1.79021174675609,0,0,0,0,0,0.185536196323703,0,1.82299432759663,0,0,0.568967241427498,0,1.41832609060762,0,0.291604613383254,3.47249989866585,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0.219385397153973,1.63407695278485,1.11538995422883,0.461701551022782,1.02547850262301,0,2.15418346583453,1.62971057883012,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,1.05499032264014,0.979396848954886,0.848118428603645,0,0,0,0,0.296521128680622,0.86494757262552,0.522109747527277,0.134802265961354,0,0,0,0.978323094660449,1.69946265673865,0,0,0,0,7.51617097072463,6.63604424942382,5.98188485436467,6.95083107338548,7.53439004177341,4.77889719091835,2.84609546029793,0,0.694238953340524,1.86185555087318,3.3953090566357,0.34945333648406,1.20390222730132,2.41890828222713,3.80064448848165,2.21711734043665,6.40127508823568,32.0369739890146,0.677942222341597,1.37041924646751,6.35886757449567,0.189932387867636,1.36885967914362,3.28651163031288,0,4.99524023955326,3.89044126316086,1.60351234632282,3.08870996151536,0.432164393964449,2.85780831800495,1.41416420770077,0.135904206073614,0,2.24396078799908,5.20111061822734,0,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0,2.52209918479682,0,0.0787831823072236,0.0824158583811665,0,1.77169466726548,0,0,0.681017030557878,0,0,0,0,0,0,0.335434687599266,2.12775409707835,4.56354916774483,1.6896053843105,2.15144807199414,3.64638874906946,0,0,0.76280561296425,0,0,0,4.7892076624995,0,0,1.35974509824151,0,0,0,0.13223260174269,1.02652102730598,0.704815022316672,0,0,0,0,0,0,2.55336503108073,0,0,0,0.655745261419609,1.88464915500281,0,0,0.3755727921195,0,0.221858103073705,0,0.415045904808692,1.8747061194316,0.303298235083296,0.570930667089935,2.58792401667989,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0.15543720058278,1.92211694986524,0,0.449803112163605,0.465788870628778,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0,0.398095888698616,6.40044423461046,0,0,0,1.34833881285112,1.92997432237433,17.7476118536344,4.53411851024545,2.77826969188601,3.67105056759701,4.65630986811867,3.39681591877069,9.64849818146311,0.70675658378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| ||
|short_description=p2@SIM2 | |||
}} | }} |
Latest revision as of 07:59, 18 September 2015
Short description: | p2@SIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIM2_5end |
Coexpression cluster: | C2630_extraskeletal_Fibroblast_Smooth_Aortic_mesothelioma_prostate_small |
Association with transcript: | -4bp_to_ENST00000460783_5end |
EntrezGene: | SIM2 |
HGNC: | 10883 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.85e-18 | 253 |
kidney tubule cell | 1.99e-10 | 10 |
nephron tubule epithelial cell | 1.99e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.99e-10 | 10 |
trunk region element | 2.77e-10 | 101 |
larynx | 4.68e-10 | 9 |
upper respiratory tract | 1.06e-08 | 19 |
kidney | 2.16e-08 | 26 |
kidney mesenchyme | 2.16e-08 | 26 |
upper urinary tract | 2.16e-08 | 26 |
kidney rudiment | 2.16e-08 | 26 |
kidney field | 2.16e-08 | 26 |
trunk | 3.36e-08 | 199 |
segment of respiratory tract | 7.41e-08 | 47 |
urinary system structure | 1.21e-07 | 47 |
cavitated compound organ | 1.61e-07 | 31 |
renal system | 2.32e-07 | 48 |
abdomen element | 3.82e-07 | 54 |
abdominal segment element | 3.82e-07 | 54 |
digestive system | 6.23e-07 | 145 |
digestive tract | 6.23e-07 | 145 |
primitive gut | 6.23e-07 | 145 |
foregut | 7.69e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.65e-32 | 143 |
carcinoma | 4.96e-31 | 106 |
cancer | 2.23e-28 | 235 |
disease of cellular proliferation | 3.65e-27 | 239 |
adenocarcinoma | 5.36e-10 | 25 |
gastrointestinal system cancer | 1.72e-07 | 14 |