FFCP PHASE1:Hg19::chr10:135379074..135379092,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93426 | |EntrezGene=93426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28852 | |HGNC=28852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460441,ENST00000482127_5end | |association_with_transcript=0bp_to_ENST00000460441,ENST00000482127_5end | ||
|cluster_id=chr10:135379074..135379092,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_SYCE1_5end | |description=CAGE_peak_2_at_SYCE1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002573;2.48e-07;2 | |ontology_enrichment_celltype_v019=CL:0002573;2.48e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.11e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;9.11e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-32!115;UBERON:0001049!5.24e-19!57;UBERON:0005068!5.24e-19!57;UBERON:0006241!5.24e-19!57;UBERON:0007135!5.24e-19!57;UBERON:0001893!1.29e-17!34;UBERON:0001869!1.64e-17!32;UBERON:0002619!3.68e-17!22;UBERON:0001950!3.85e-17!20;UBERON:0002791!1.76e-16!33;UBERON:0000073!4.45e-16!94;UBERON:0001016!4.45e-16!94;UBERON:0002020!4.54e-16!34;UBERON:0003528!4.54e-16!34;UBERON:0001017!6.60e-16!82;UBERON:0002616!1.12e-15!59;UBERON:0005743!1.89e-15!86;UBERON:0000955!3.51e-15!69;UBERON:0006238!3.51e-15!69;UBERON:0002780!7.85e-15!41;UBERON:0001890!7.85e-15!41;UBERON:0006240!7.85e-15!41;UBERON:0000956!1.69e-14!25;UBERON:0000203!1.69e-14!25;UBERON:0003075!2.28e-14!86;UBERON:0007284!2.28e-14!86;UBERON:0003080!2.65e-14!42;UBERON:0002346!3.23e-13!90;UBERON:0004121!2.61e-10!169;UBERON:0000924!9.68e-10!173;UBERON:0006601!9.68e-10!173;UBERON:0000200!1.24e-09!6;UBERON:0000153!2.60e-09!129;UBERON:0007811!2.60e-09!129;UBERON:0000033!1.33e-08!123;UBERON:0003056!2.31e-08!61 | |ontology_enrichment_uberon=UBERON:0007023!6.13e-32!115;UBERON:0001049!5.24e-19!57;UBERON:0005068!5.24e-19!57;UBERON:0006241!5.24e-19!57;UBERON:0007135!5.24e-19!57;UBERON:0001893!1.29e-17!34;UBERON:0001869!1.64e-17!32;UBERON:0002619!3.68e-17!22;UBERON:0001950!3.85e-17!20;UBERON:0002791!1.76e-16!33;UBERON:0000073!4.45e-16!94;UBERON:0001016!4.45e-16!94;UBERON:0002020!4.54e-16!34;UBERON:0003528!4.54e-16!34;UBERON:0001017!6.60e-16!82;UBERON:0002616!1.12e-15!59;UBERON:0005743!1.89e-15!86;UBERON:0000955!3.51e-15!69;UBERON:0006238!3.51e-15!69;UBERON:0002780!7.85e-15!41;UBERON:0001890!7.85e-15!41;UBERON:0006240!7.85e-15!41;UBERON:0000956!1.69e-14!25;UBERON:0000203!1.69e-14!25;UBERON:0003075!2.28e-14!86;UBERON:0007284!2.28e-14!86;UBERON:0003080!2.65e-14!42;UBERON:0002346!3.23e-13!90;UBERON:0004121!2.61e-10!169;UBERON:0000924!9.68e-10!173;UBERON:0006601!9.68e-10!173;UBERON:0000200!1.24e-09!6;UBERON:0000153!2.60e-09!129;UBERON:0007811!2.60e-09!129;UBERON:0000033!1.33e-08!123;UBERON:0003056!2.31e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.11e-19;20!UBERON:0002619;1.50e-17;22!UBERON:0001869;4.49e-16;32!UBERON:0001893;1.34e-15;34!UBERON:0000956;2.63e-15;25!UBERON:0000203;2.63e-15;25!UBERON:0003528;2.15e-14;34!UBERON:0002020;2.15e-14;34!UBERON:0002791;2.44e-13;32!UBERON:0000200;2.44e-12;6!UBERON:0000955;6.34e-10;68!UBERON:0001017;7.61e-10;75!UBERON:0002780;3.52e-09;41!UBERON:0001890;3.52e-09;41!UBERON:0000073;6.98e-09;53!UBERON:0002616;6.98e-09;53!UBERON:0002021;1.39e-08;5!UBERON:0001872;1.59e-08;5!UBERON:0004732;3.08e-08;13!UBERON:0001016;5.47e-08;83!UBERON:0002298;3.56e-07;6!UBERON:0001870;4.30e-07;3!UBERON:0000988;6.84e-07;3!UBERON:0007023;8.21e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.11e-19;20!UBERON:0002619;1.50e-17;22!UBERON:0001869;4.49e-16;32!UBERON:0001893;1.34e-15;34!UBERON:0000956;2.63e-15;25!UBERON:0000203;2.63e-15;25!UBERON:0003528;2.15e-14;34!UBERON:0002020;2.15e-14;34!UBERON:0002791;2.44e-13;32!UBERON:0000200;2.44e-12;6!UBERON:0000955;6.34e-10;68!UBERON:0001017;7.61e-10;75!UBERON:0002780;3.52e-09;41!UBERON:0001890;3.52e-09;41!UBERON:0000073;6.98e-09;53!UBERON:0002616;6.98e-09;53!UBERON:0002021;1.39e-08;5!UBERON:0001872;1.59e-08;5!UBERON:0004732;3.08e-08;13!UBERON:0001016;5.47e-08;83!UBERON:0002298;3.56e-07;6!UBERON:0001870;4.30e-07;3!UBERON:0000988;6.84e-07;3!UBERON:0007023;8.21e-07;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.95e-20,89;UBERON:0001950,1.51e-19,20;UBERON:0000955,2.12e-18,68;UBERON:0006238,2.12e-18,68;UBERON:0002619,1.11e-17,22;UBERON:0000073,2.28e-17,53;UBERON:0002616,2.28e-17,53;UBERON:0001869,5.59e-17,32;UBERON:0001017,1.06e-16,81;UBERON:0001049,2.90e-16,56;UBERON:0005068,2.90e-16,56;UBERON:0006241,2.90e-16,56;UBERON:0007135,2.90e-16,56;UBERON:0001893,7.25e-16,34;UBERON:0003528,7.57e-16,34;UBERON:0002020,7.57e-16,34;UBERON:0000956,2.02e-15,25;UBERON:0000203,2.02e-15,25;UBERON:0007023,2.23e-15,114;UBERON:0002791,3.48e-14,32;UBERON:0002780,8.30e-13,41;UBERON:0001890,8.30e-13,41;UBERON:0003080,8.30e-13,41;UBERON:0006240,8.30e-13,41;UBERON:0000200,1.69e-12,6;UBERON:0003075,1.57e-11,82;UBERON:0007284,1.57e-11,82;UBERON:0010371,6.79e-11,104;UBERON:0002346,7.89e-11,86;UBERON:0004121,2.73e-10,171;UBERON:0000924,2.73e-10,171;UBERON:0006601,2.73e-10,171;UBERON:0003056,2.26e-09,61;UBERON:0011216,4.67e-09,223;UBERON:0010314,1.05e-08,132;UBERON:0002021,1.24e-08,5;UBERON:0001872,1.34e-08,5;UBERON:0004732,3.01e-08,13;UBERON:0002298,3.53e-07,6;UBERON:0001870,3.93e-07,3;UBERON:0000988,5.99e-07,3 | |||
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|short_description=p2@SYCE1 | |short_description=p2@SYCE1 | ||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p2@SYCE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYCE1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000460441, ENST00000482127_5end |
EntrezGene: | SYCE1 |
HGNC: | 28852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.48e-07 | 2 |