FFCP PHASE1:Hg19::chr1:24646002..24646013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57822 | |EntrezGene=57822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25839 | |HGNC=25839 | ||
|TSSclassifier=strong | |||
|UniProt=A2A297,Q8TE85 | |UniProt=A2A297,Q8TE85 | ||
|association_with_transcript=-42bp_to_ENST00000356046,NM_001195010_5end | |association_with_transcript=-42bp_to_ENST00000356046,NM_001195010_5end | ||
|cluster_id=chr1:24646002..24646013,+ | |||
|description=CAGE_peak_3_at_GRHL3_5end | |description=CAGE_peak_3_at_GRHL3_5end | ||
|id=chr1:24646002..24646013,+ | |id=chr1:24646002..24646013,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.03e-13!254;CL:0002076!4.56e-11!43;CL:0000223!1.22e-08!59;CL:0000622!1.18e-07!5;CL:0002251!1.70e-07!21;CL:0002159!3.71e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.03e-13!254;CL:0002076!4.56e-11!43;CL:0000223!1.22e-08!59;CL:0000622!1.18e-07!5;CL:0002251!1.70e-07!21;CL:0002159!3.71e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.77e-17;5!CL:0000154;1.60e-14;6!CL:0002623;1.89e-11;3!CL:0000150;1.38e-09;9!CL:0002159;1.48e-08;14!CL:0000575;2.01e-08;2!CL:0001014;4.46e-08;2!CL:0001016;4.46e-08;2!CL:0000317;9.72e-08;2!CL:1000448;9.72e-08;2!CL:0002308;9.72e-08;2!CL:0002140;9.72e-08;2 | |ontology_enrichment_celltype_v019=CL:0000622;1.77e-17;5!CL:0000154;1.60e-14;6!CL:0002623;1.89e-11;3!CL:0000150;1.38e-09;9!CL:0002159;1.48e-08;14!CL:0000575;2.01e-08;2!CL:0001014;4.46e-08;2!CL:0001016;4.46e-08;2!CL:0000317;9.72e-08;2!CL:1000448;9.72e-08;2!CL:0002308;9.72e-08;2!CL:0002140;9.72e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.36e-17,5;CL:0000154,2.02e-14,6;CL:0002623,3.12e-11,3;CL:0000150,1.61e-09,9;CL:0002159,1.44e-08,14;CL:0000575,1.80e-08,2;CL:0001014,6.17e-08,2;CL:0001016,6.17e-08,2;CL:0000317,7.90e-08,2;CL:1000448,7.90e-08,2;CL:0002308,7.90e-08,2;CL:0002140,7.90e-08,2;CL:0000066,2.08e-07,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!2.30e-08!14;DOID:305!3.64e-08!106 | |ontology_enrichment_disease=DOID:1749!2.30e-08!14;DOID:305!3.64e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;6.15e-09;4!DOID:1612;6.15e-09;4 | |ontology_enrichment_disease_v019=DOID:5093;6.15e-09;4!DOID:1612;6.15e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,8.07e-09,4;DOID:1612,8.07e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003076!3.83e-10!15;UBERON:0003057!3.83e-10!15;UBERON:0000161!9.34e-10!35;UBERON:0000062!4.52e-09!511;UBERON:0000475!5.28e-09!365;UBERON:0000922!1.50e-08!612;UBERON:0001008!1.54e-08!45;UBERON:0006554!7.76e-08!44;UBERON:0000468!9.98e-08!659;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0004121!1.36e-07!169;UBERON:0004733!2.53e-07!12;UBERON:0002028!2.53e-07!12;UBERON:0007277!2.53e-07!12;UBERON:0000489!3.24e-07!32;UBERON:0004119!4.48e-07!169;UBERON:0000925!4.48e-07!169;UBERON:0006595!4.48e-07!169;UBERON:0000344!5.22e-07!12;UBERON:0001004!7.03e-07!72;UBERON:0002298!7.41e-07!8 | |ontology_enrichment_uberon=UBERON:0003076!3.83e-10!15;UBERON:0003057!3.83e-10!15;UBERON:0000161!9.34e-10!35;UBERON:0000062!4.52e-09!511;UBERON:0000475!5.28e-09!365;UBERON:0000922!1.50e-08!612;UBERON:0001008!1.54e-08!45;UBERON:0006554!7.76e-08!44;UBERON:0000468!9.98e-08!659;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0004121!1.36e-07!169;UBERON:0004733!2.53e-07!12;UBERON:0002028!2.53e-07!12;UBERON:0007277!2.53e-07!12;UBERON:0000489!3.24e-07!32;UBERON:0004119!4.48e-07!169;UBERON:0000925!4.48e-07!169;UBERON:0006595!4.48e-07!169;UBERON:0000344!5.22e-07!12;UBERON:0001004!7.03e-07!72;UBERON:0002298!7.41e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;9.72e-08;2!UBERON:0007771;9.72e-08;2!UBERON:0003297;9.72e-08;2!UBERON:0001821;9.72e-08;2!UBERON:0003487;9.72e-08;2!UBERON:0001820;9.72e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002419;9.72e-08;2!UBERON:0007771;9.72e-08;2!UBERON:0003297;9.72e-08;2!UBERON:0001821;9.72e-08;2!UBERON:0003487;9.72e-08;2!UBERON:0001820;9.72e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,7.90e-08,2;UBERON:0007771,7.90e-08,2;UBERON:0003297,7.90e-08,2;UBERON:0001821,7.90e-08,2;UBERON:0003487,7.90e-08,2;UBERON:0001820,7.90e-08,2;UBERON:0005089,7.90e-08,2;UBERON:0005088,7.90e-08,2 | |||
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| ||
|short_description=p3@GRHL3 | |short_description=p3@GRHL3 | ||
}} | }} |
Latest revision as of 22:36, 16 September 2015
Short description: | p3@GRHL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRHL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000356046, NM_001195010_5end |
EntrezGene: | GRHL3 |
HGNC: | 25839 |
UniProt: | A2A297Q8TE85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.36e-17 | 5 |
protein secreting cell | 2.02e-14 | 6 |
acinar cell of salivary gland | 3.12e-11 | 3 |
glandular epithelial cell | 1.61e-09 | 9 |
general ecto-epithelial cell | 1.44e-08 | 14 |
corneal epithelial cell | 1.80e-08 | 2 |
CD1a-positive Langerhans cell | 6.17e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.17e-08 | 2 |
sebum secreting cell | 7.90e-08 | 2 |
epithelial cell of sweat gland | 7.90e-08 | 2 |
epithelial cell of skin gland | 7.90e-08 | 2 |
acinar cell of sebaceous gland | 7.90e-08 | 2 |
epithelial cell | 2.08e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin gland | 7.90e-08 | 2 |
epidermis gland | 7.90e-08 | 2 |
gland of integumental system | 7.90e-08 | 2 |
sebaceous gland | 7.90e-08 | 2 |
skin sebaceous gland | 7.90e-08 | 2 |
sweat gland | 7.90e-08 | 2 |
sweat gland placode | 7.90e-08 | 2 |
sebaceous gland placode | 7.90e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.07e-09 | 4 |
breast cancer | 8.07e-09 | 4 |