FFCP PHASE1:Hg19::chr21:46420365..46420376,+: Difference between revisions
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|id=chr21:46420365..46420376,+
|short_description=p@chr21:46420365..46420376,+
|description=CAGE_peak_at_chr21:46420365..46420376,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:46420365..46420376,+ | |||
|coexpression_cluster_id=C1599 | |||
|description=CAGE_peak_at_chr21:46420365..46420376,+ | |||
|id=chr21:46420365..46420376,+ | |||
|ontology_enrichment_celltype=CL:0000240!2.13e-10!6;CL:0000311!2.13e-10!6;CL:0000079!2.13e-10!6;CL:0000237!2.13e-10!6;CL:0000036!2.13e-10!6;CL:0000357!2.13e-10!6;CL:0000114!2.13e-10!6;CL:0002621!6.87e-10!3;CL:0002159!1.68e-08!13;CL:0002242!2.04e-08!1;CL:0000228!2.04e-08!1;CL:0002372!2.04e-08!1;CL:0000362!4.45e-08!8;CL:0002251!7.39e-08!21;CL:0002336!9.29e-08!1;CL:0002261!9.29e-08!1;CL:0002170!9.29e-08!1;CL:0002076!7.70e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000228;5.12e-50;1!CL:0002372;5.12e-50;1!CL:0001014;4.32e-26;2!CL:0001016;4.32e-26;2!CL:0000056;1.21e-13;4!CL:0000737;1.21e-13;4!CL:0000453;2.66e-11;5!CL:0000840;1.22e-09;5!CL:0000680;2.26e-08;7!CL:0000990;7.48e-07;8!CL:0000188;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.58e-50,1;CL:0002372,6.58e-50,1;CL:0001014,4.32e-26,2;CL:0001016,4.32e-26,2;CL:0000737,1.29e-13,4;CL:0000515,1.29e-13,4;CL:0000453,2.66e-11,5;CL:0000840,1.22e-09,5;CL:0001029,1.22e-09,5;CL:0000990,7.48e-07,8;CL:0000188,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.12e-50;1!CL:0000515;1.21e-13;4!UBERON:0004872;2.26e-08;7 | |||
|ontology_enrichment_disease=DOID:178!4.71e-08!1;DOID:326!4.71e-08!1;DOID:3978!4.71e-08!1;DOID:3394!4.71e-08!1;DOID:5844!4.71e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.87e-10!3;UBERON:0003102!2.34e-09!95;UBERON:0007029!1.77e-08!1;UBERON:0000161!1.95e-08!35;UBERON:0000165!4.66e-08!28;UBERON:0000930!4.66e-08!28;UBERON:0001003!6.10e-08!14;UBERON:0007376!6.10e-08!14;UBERON:0007383!6.10e-08!14;UBERON:0000166!8.20e-08!21;UBERON:0001043!9.32e-08!4;UBERON:0009143!9.32e-08!4;UBERON:0007190!1.14e-07!1;UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.42e-50;1!UBERON:0000014;1.00e-13;4!UBERON:0001987;1.21e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.42e-50,1;UBERON:0000014,1.00e-13,4;UBERON:0001987,1.13e-13,4;UBERON:0004340,1.13e-13,4;UBERON:0003124,2.18e-08,7 | |||
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|short_description=p@chr21:46420365..46420376,+ | |||
}} | }} |
Latest revision as of 18:35, 28 July 2015
Short description: | p@chr21:46420365..46420376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46420365..46420376, + |
Coexpression cluster: | C1599_skin_immature_uterus_salivary_cervix_penis_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.58e-50 | 1 |
myotube | 6.58e-50 | 1 |
CD1a-positive Langerhans cell | 4.32e-26 | 2 |
immature CD1a-positive Langerhans cell | 4.32e-26 | 2 |
striated muscle cell | 1.29e-13 | 4 |
skeletal muscle myoblast | 1.29e-13 | 4 |
Langerhans cell | 2.66e-11 | 5 |
immature conventional dendritic cell | 1.22e-09 | 5 |
common dendritic progenitor | 1.22e-09 | 5 |
conventional dendritic cell | 7.48e-07 | 8 |
cell of skeletal muscle | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface | 2.42e-50 | 1 |
zone of skin | 1.00e-13 | 4 |
placenta | 1.13e-13 | 4 |
allantois | 1.13e-13 | 4 |
chorion | 2.18e-08 | 7 |