FFCP PHASE1:Hg19::chr8:16425014..16425019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4481 | |EntrezGene=4481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7376 | |HGNC=7376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000522130_5end | |association_with_transcript=-15bp_to_ENST00000522130_5end | ||
|cluster_id=chr8:16425014..16425019,- | |||
|coexpression_cluster_id=C1515 | |coexpression_cluster_id=C1515 | ||
|description=CAGE_peak_13_at_MSR1_5end | |description=CAGE_peak_13_at_MSR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!5.92e-40!6;CL:0002138!5.92e-40!6;CL:0005022!5.92e-40!6;CL:0002139!3.02e-38!24;CL:0000115!3.23e-31!35;CL:0002078!1.66e-24!44;CL:0000213!1.51e-18!57;CL:0000215!1.51e-18!57;CL:0002573!4.15e-14!2;CL:0002144!6.96e-14!3;CL:0000071!4.15e-13!18;CL:0002546!4.15e-13!18;CL:0000222!1.93e-11!119;CL:0000220!2.80e-07!246;CL:0002321!3.36e-07!248 | |ontology_enrichment_celltype=CL:0005020!5.92e-40!6;CL:0002138!5.92e-40!6;CL:0005022!5.92e-40!6;CL:0002139!3.02e-38!24;CL:0000115!3.23e-31!35;CL:0002078!1.66e-24!44;CL:0000213!1.51e-18!57;CL:0000215!1.51e-18!57;CL:0002573!4.15e-14!2;CL:0002144!6.96e-14!3;CL:0000071!4.15e-13!18;CL:0002546!4.15e-13!18;CL:0000222!1.93e-11!119;CL:0000220!2.80e-07!246;CL:0002321!3.36e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002138;6.35e-50;6!CL:0002573;1.52e-44;2!CL:0002139;3.63e-13;24!CL:0000243;9.25e-09;15!CL:0000125;9.25e-09;15!CL:0000115;3.06e-08;36!CL:0000095;6.15e-08;17 | |ontology_enrichment_celltype_v019=CL:0002138;6.35e-50;6!CL:0002573;1.52e-44;2!CL:0002139;3.63e-13;24!CL:0000243;9.25e-09;15!CL:0000125;9.25e-09;15!CL:0000115;3.06e-08;36!CL:0000095;6.15e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,5.37e-50,6;CL:0002138,5.37e-50,6;CL:0005022,5.37e-50,6;CL:0002573,1.22e-44,2;CL:0002139,3.48e-13,24;CL:0000115,4.86e-09,36;CL:0000243,8.90e-09,15;CL:0000125,8.90e-09,15;CL:0000030,8.90e-09,15;CL:0000339,8.90e-09,15;CL:0000095,5.94e-08,17;CL:0000123,5.94e-08,17;CL:0002078,2.28e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;6.35e-50;6!CL:0000339;9.25e-09;15 | |ontology_enrichment_development_v019=CL:0005022;6.35e-50;6!CL:0000339;9.25e-09;15 | ||
|ontology_enrichment_disease=DOID:2355!1.46e-10!1 | |ontology_enrichment_disease=DOID:2355!1.46e-10!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!5.56e-30!8;UBERON:0004536!5.56e-30!8;UBERON:0006558!5.56e-30!8;UBERON:0002465!5.48e-24!10;UBERON:0000055!5.29e-18!69;UBERON:0002049!1.73e-15!79;UBERON:0007798!1.73e-15!79;UBERON:0001915!6.96e-14!3;UBERON:0001982!6.96e-14!3;UBERON:0001986!4.15e-13!18;UBERON:0004638!4.15e-13!18;UBERON:0004852!4.15e-13!18;UBERON:0000487!1.05e-10!22;UBERON:0004535!1.37e-10!110;UBERON:0001009!2.94e-10!113;UBERON:0006914!2.10e-09!25;UBERON:0004111!1.83e-07!241;UBERON:0001981!4.83e-07!60;UBERON:0007500!4.83e-07!60;UBERON:0004537!4.83e-07!60;UBERON:0006965!4.83e-07!60 | |ontology_enrichment_uberon=UBERON:0001473!5.56e-30!8;UBERON:0004536!5.56e-30!8;UBERON:0006558!5.56e-30!8;UBERON:0002465!5.48e-24!10;UBERON:0000055!5.29e-18!69;UBERON:0002049!1.73e-15!79;UBERON:0007798!1.73e-15!79;UBERON:0001915!6.96e-14!3;UBERON:0001982!6.96e-14!3;UBERON:0001986!4.15e-13!18;UBERON:0004638!4.15e-13!18;UBERON:0004852!4.15e-13!18;UBERON:0000487!1.05e-10!22;UBERON:0004535!1.37e-10!110;UBERON:0001009!2.94e-10!113;UBERON:0006914!2.10e-09!25;UBERON:0004111!1.83e-07!241;UBERON:0001981!4.83e-07!60;UBERON:0007500!4.83e-07!60;UBERON:0004537!4.83e-07!60;UBERON:0006965!4.83e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.04e-37;8!UBERON:0004536;1.04e-37;8!UBERON:0006558;1.04e-37;8!UBERON:0002465;2.27e-30;10!UBERON:0000010;1.22e-15;8!UBERON:0002405;8.62e-12;27 | |ontology_enrichment_uberon_v019=UBERON:0001473;1.04e-37;8!UBERON:0004536;1.04e-37;8!UBERON:0006558;1.04e-37;8!UBERON:0002465;2.27e-30;10!UBERON:0000010;1.22e-15;8!UBERON:0002405;8.62e-12;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.18e-38,8;UBERON:0004536,9.18e-38,8;UBERON:0006558,9.18e-38,8;UBERON:0002465,2.06e-30,10;UBERON:0000010,1.13e-15,8 | |||
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|short_description=p13@MSR1 | |short_description=p13@MSR1 | ||
}} | }} |
Latest revision as of 03:29, 17 September 2015
Short description: | p13@MSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MSR1_5end |
Coexpression cluster: | C1515_Endothelial_schwannoma_Renal_cerebellum_lung_heart_diaphragm |
Association with transcript: | -15bp_to_ENST00000522130_5end |
EntrezGene: | MSR1 |
HGNC: | 7376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 5.37e-50 | 6 |
endothelial cell of lymphatic vessel | 5.37e-50 | 6 |
vascular lymphangioblast | 5.37e-50 | 6 |
Schwann cell | 1.22e-44 | 2 |
endothelial cell of vascular tree | 3.48e-13 | 24 |
endothelial cell | 4.86e-09 | 36 |
glial cell (sensu Vertebrata) | 8.90e-09 | 15 |
glial cell | 8.90e-09 | 15 |
glioblast | 8.90e-09 | 15 |
glioblast (sensu Vertebrata) | 8.90e-09 | 15 |
neuron associated cell | 5.94e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.94e-08 | 17 |
meso-epithelial cell | 2.28e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 9.18e-38 | 8 |
lymph vasculature | 9.18e-38 | 8 |
lymphatic part of lymphoid system | 9.18e-38 | 8 |
lymphoid system | 2.06e-30 | 10 |
peripheral nervous system | 1.13e-15 | 8 |