FFCP PHASE1:Hg19::chr3:62228762..62228795,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5793 | |EntrezGene=5793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9671 | |HGNC=9671 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-454bp_to_ENST00000485215_5end | |association_with_transcript=-454bp_to_ENST00000485215_5end | ||
|cluster_id=chr3:62228762..62228795,+ | |||
|coexpression_cluster_id=C361 | |coexpression_cluster_id=C361 | ||
|description=CAGE_peak_6_at_PTPRG_5end | |description=CAGE_peak_6_at_PTPRG_5end | ||
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|ontology_enrichment_celltype=CL:0000047!8.02e-12!8;CL:0000540!4.67e-07!6;CL:0000031!4.67e-07!6;CL:0000404!4.67e-07!6 | |ontology_enrichment_celltype=CL:0000047!8.02e-12!8;CL:0000540!4.67e-07!6;CL:0000031!4.67e-07!6;CL:0000404!4.67e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.21e-11;2 | |ontology_enrichment_celltype_v019=CL:0000047;6.21e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.70e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.95e-15;3!UBERON:0006601;1.28e-14;82 | |ontology_enrichment_development_v019=UBERON:0006215;2.95e-15;3!UBERON:0006601;1.28e-14;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.08e-94!82;UBERON:0005743!1.53e-92!86;UBERON:0001049!2.54e-90!57;UBERON:0005068!2.54e-90!57;UBERON:0006241!2.54e-90!57;UBERON:0007135!2.54e-90!57;UBERON:0002616!5.65e-83!59;UBERON:0000073!1.51e-82!94;UBERON:0001016!1.51e-82!94;UBERON:0000955!3.38e-75!69;UBERON:0006238!3.38e-75!69;UBERON:0002780!1.25e-73!41;UBERON:0001890!1.25e-73!41;UBERON:0006240!1.25e-73!41;UBERON:0003080!1.14e-71!42;UBERON:0003075!2.68e-67!86;UBERON:0007284!2.68e-67!86;UBERON:0001869!1.42e-65!32;UBERON:0001893!1.63e-65!34;UBERON:0002020!5.85e-65!34;UBERON:0003528!5.85e-65!34;UBERON:0002346!9.89e-64!90;UBERON:0002791!6.01e-63!33;UBERON:0003056!1.31e-52!61;UBERON:0002619!2.13e-51!22;UBERON:0007023!8.88e-50!115;UBERON:0000956!6.85e-49!25;UBERON:0000203!6.85e-49!25;UBERON:0001950!2.01e-46!20;UBERON:0004121!1.14e-43!169;UBERON:0000033!4.58e-43!123;UBERON:0000924!2.51e-42!173;UBERON:0006601!2.51e-42!173;UBERON:0000153!1.83e-40!129;UBERON:0007811!1.83e-40!129;UBERON:0003076!5.83e-19!15;UBERON:0003057!5.83e-19!15;UBERON:0000025!6.25e-19!194;UBERON:0002420!7.43e-18!9;UBERON:0007245!7.43e-18!9;UBERON:0010009!7.43e-18!9;UBERON:0010011!7.43e-18!9;UBERON:0000454!7.43e-18!9;UBERON:0002308!4.14e-17!9;UBERON:0000125!4.14e-17!9;UBERON:0004733!1.78e-16!12;UBERON:0002028!1.78e-16!12;UBERON:0007277!1.78e-16!12;UBERON:0000200!2.86e-16!6;UBERON:0001871!1.60e-15!7;UBERON:0004732!4.58e-15!13;UBERON:0000349!5.91e-14!5;UBERON:0001872!2.15e-13!5;UBERON:0009663!3.64e-13!7;UBERON:0002021!3.82e-13!5;UBERON:0004111!6.86e-13!241;UBERON:0003296!1.73e-11!4;UBERON:0010133!1.73e-11!4;UBERON:0000483!1.80e-11!309;UBERON:0000119!3.09e-11!312;UBERON:0000369!3.75e-11!4;UBERON:0002435!3.75e-11!4;UBERON:0000204!3.75e-11!4;UBERON:0010082!3.75e-11!4;UBERON:0000064!4.12e-11!219;UBERON:0002298!9.05e-11!8;UBERON:0000477!2.18e-10!286;UBERON:0002680!2.84e-10!9;UBERON:0001895!2.84e-10!9;UBERON:0010092!2.84e-10!9;UBERON:0001894!1.31e-09!7;UBERON:0006222!1.31e-09!7;UBERON:0000475!6.06e-09!365;UBERON:0002771!9.82e-09!3;UBERON:0005383!1.38e-08!3;UBERON:0005382!1.38e-08!3;UBERON:0001896!1.70e-08!3;UBERON:0005290!1.70e-08!3;UBERON:0010096!1.70e-08!3;UBERON:0000988!8.82e-08!3;UBERON:0000007!4.89e-07!2;UBERON:0000481!5.94e-07!347;UBERON:0001870!6.31e-07!2 | |ontology_enrichment_uberon=UBERON:0001017!6.08e-94!82;UBERON:0005743!1.53e-92!86;UBERON:0001049!2.54e-90!57;UBERON:0005068!2.54e-90!57;UBERON:0006241!2.54e-90!57;UBERON:0007135!2.54e-90!57;UBERON:0002616!5.65e-83!59;UBERON:0000073!1.51e-82!94;UBERON:0001016!1.51e-82!94;UBERON:0000955!3.38e-75!69;UBERON:0006238!3.38e-75!69;UBERON:0002780!1.25e-73!41;UBERON:0001890!1.25e-73!41;UBERON:0006240!1.25e-73!41;UBERON:0003080!1.14e-71!42;UBERON:0003075!2.68e-67!86;UBERON:0007284!2.68e-67!86;UBERON:0001869!1.42e-65!32;UBERON:0001893!1.63e-65!34;UBERON:0002020!5.85e-65!34;UBERON:0003528!5.85e-65!34;UBERON:0002346!9.89e-64!90;UBERON:0002791!6.01e-63!33;UBERON:0003056!1.31e-52!61;UBERON:0002619!2.13e-51!22;UBERON:0007023!8.88e-50!115;UBERON:0000956!6.85e-49!25;UBERON:0000203!6.85e-49!25;UBERON:0001950!2.01e-46!20;UBERON:0004121!1.14e-43!169;UBERON:0000033!4.58e-43!123;UBERON:0000924!2.51e-42!173;UBERON:0006601!2.51e-42!173;UBERON:0000153!1.83e-40!129;UBERON:0007811!1.83e-40!129;UBERON:0003076!5.83e-19!15;UBERON:0003057!5.83e-19!15;UBERON:0000025!6.25e-19!194;UBERON:0002420!7.43e-18!9;UBERON:0007245!7.43e-18!9;UBERON:0010009!7.43e-18!9;UBERON:0010011!7.43e-18!9;UBERON:0000454!7.43e-18!9;UBERON:0002308!4.14e-17!9;UBERON:0000125!4.14e-17!9;UBERON:0004733!1.78e-16!12;UBERON:0002028!1.78e-16!12;UBERON:0007277!1.78e-16!12;UBERON:0000200!2.86e-16!6;UBERON:0001871!1.60e-15!7;UBERON:0004732!4.58e-15!13;UBERON:0000349!5.91e-14!5;UBERON:0001872!2.15e-13!5;UBERON:0009663!3.64e-13!7;UBERON:0002021!3.82e-13!5;UBERON:0004111!6.86e-13!241;UBERON:0003296!1.73e-11!4;UBERON:0010133!1.73e-11!4;UBERON:0000483!1.80e-11!309;UBERON:0000119!3.09e-11!312;UBERON:0000369!3.75e-11!4;UBERON:0002435!3.75e-11!4;UBERON:0000204!3.75e-11!4;UBERON:0010082!3.75e-11!4;UBERON:0000064!4.12e-11!219;UBERON:0002298!9.05e-11!8;UBERON:0000477!2.18e-10!286;UBERON:0002680!2.84e-10!9;UBERON:0001895!2.84e-10!9;UBERON:0010092!2.84e-10!9;UBERON:0001894!1.31e-09!7;UBERON:0006222!1.31e-09!7;UBERON:0000475!6.06e-09!365;UBERON:0002771!9.82e-09!3;UBERON:0005383!1.38e-08!3;UBERON:0005382!1.38e-08!3;UBERON:0001896!1.70e-08!3;UBERON:0005290!1.70e-08!3;UBERON:0010096!1.70e-08!3;UBERON:0000988!8.82e-08!3;UBERON:0000007!4.89e-07!2;UBERON:0000481!5.94e-07!347;UBERON:0001870!6.31e-07!2 | ||
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|short_description=p6@PTPRG | |short_description=p6@PTPRG | ||
}} | }} |
Latest revision as of 07:53, 19 September 2015
Short description: | p6@PTPRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTPRG_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | -454bp_to_ENST00000485215_5end |
EntrezGene: | PTPRG |
HGNC: | 9671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.70e-09 | 8 |