FFCP PHASE1:Hg19::chr9:131902346..131902404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5524 | |EntrezGene=5524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9308 | |HGNC=9308 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZBP7,B4DDQ6 | |UniProt=B7ZBP7,B4DDQ6 | ||
|association_with_transcript=0bp_to_ENST00000432124,ENST00000435305_5end | |association_with_transcript=0bp_to_ENST00000432124,ENST00000435305_5end | ||
|cluster_id=chr9:131902346..131902404,+ | |||
|description=CAGE_peak_6_at_PPP2R4_5end | |description=CAGE_peak_6_at_PPP2R4_5end | ||
|id=chr9:131902346..131902404,+ | |id=chr9:131902346..131902404,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;8.62e-07;19 | |ontology_enrichment_celltype_v019=CL:0000349;8.62e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.55e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.86e-07!106 | |ontology_enrichment_disease=DOID:305!1.86e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.43e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000062!1.55e-16!511;UBERON:0000481!1.54e-14!347;UBERON:0000064!1.25e-12!219;UBERON:0004921!6.98e-12!129;UBERON:0004185!6.98e-12!129;UBERON:0007023!5.66e-11!115;UBERON:0001048!7.53e-11!168;UBERON:0001007!3.72e-10!155;UBERON:0001555!3.72e-10!155;UBERON:0007026!3.72e-10!155;UBERON:0000077!3.18e-09!130;UBERON:0004119!3.24e-09!169;UBERON:0000925!3.24e-09!169;UBERON:0006595!3.24e-09!169;UBERON:0000468!6.91e-09!659;UBERON:0005743!9.76e-09!86;UBERON:0002346!9.77e-09!90;UBERON:0000922!2.40e-08!612;UBERON:0003075!3.68e-08!86;UBERON:0007284!3.68e-08!86;UBERON:0001041!5.38e-08!98;UBERON:0001017!7.78e-08!82;UBERON:0000924!1.27e-07!173;UBERON:0006601!1.27e-07!173;UBERON:0001737!2.87e-07!9;UBERON:0004121!3.94e-07!169;UBERON:0000073!3.99e-07!94;UBERON:0001016!3.99e-07!94;UBERON:0000477!8.22e-07!286;UBERON:0005156!9.84e-07!59;UBERON:0000990!9.84e-07!59 | |ontology_enrichment_uberon=UBERON:0000062!1.55e-16!511;UBERON:0000481!1.54e-14!347;UBERON:0000064!1.25e-12!219;UBERON:0004921!6.98e-12!129;UBERON:0004185!6.98e-12!129;UBERON:0007023!5.66e-11!115;UBERON:0001048!7.53e-11!168;UBERON:0001007!3.72e-10!155;UBERON:0001555!3.72e-10!155;UBERON:0007026!3.72e-10!155;UBERON:0000077!3.18e-09!130;UBERON:0004119!3.24e-09!169;UBERON:0000925!3.24e-09!169;UBERON:0006595!3.24e-09!169;UBERON:0000468!6.91e-09!659;UBERON:0005743!9.76e-09!86;UBERON:0002346!9.77e-09!90;UBERON:0000922!2.40e-08!612;UBERON:0003075!3.68e-08!86;UBERON:0007284!3.68e-08!86;UBERON:0001041!5.38e-08!98;UBERON:0001017!7.78e-08!82;UBERON:0000924!1.27e-07!173;UBERON:0006601!1.27e-07!173;UBERON:0001737!2.87e-07!9;UBERON:0004121!3.94e-07!169;UBERON:0000073!3.99e-07!94;UBERON:0001016!3.99e-07!94;UBERON:0000477!8.22e-07!286;UBERON:0005156!9.84e-07!59;UBERON:0000990!9.84e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.93e-07;9!UBERON:0001557;1.93e-07;9!UBERON:0000956;7.97e-07;25!UBERON:0000203;7.97e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.93e-07;9!UBERON:0001557;1.93e-07;9!UBERON:0000956;7.97e-07;25!UBERON:0000203;7.97e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,7.77e-17,223;UBERON:0004921,3.71e-13,118;UBERON:0001048,1.39e-11,160;UBERON:0007023,1.57e-11,114;UBERON:0001007,1.73e-11,145;UBERON:0001555,1.73e-11,145;UBERON:0007026,1.73e-11,145;UBERON:0004119,4.11e-10,160;UBERON:0000925,4.11e-10,160;UBERON:0006595,4.11e-10,160;UBERON:0002346,2.29e-09,86;UBERON:0001041,3.03e-09,87;UBERON:0003075,9.18e-09,82;UBERON:0007284,9.18e-09,82;UBERON:0001017,5.06e-08,81;UBERON:0000922,5.16e-08,592;UBERON:0004121,7.13e-08,171;UBERON:0000924,7.13e-08,171;UBERON:0006601,7.13e-08,171;UBERON:0001737,2.00e-07,9;UBERON:0000956,8.76e-07,25;UBERON:0000203,8.76e-07,25 | |||
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| ||
|short_description=p6@PPP2R4 | |short_description=p6@PPP2R4 | ||
}} | }} |
Latest revision as of 22:06, 15 September 2015
Short description: | p6@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPP2R4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432124, ENST00000435305_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | B7ZBP7B4DDQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.55e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 7.77e-17 | 223 |
subdivision of digestive tract | 3.71e-13 | 118 |
primordium | 1.39e-11 | 160 |
adult organism | 1.57e-11 | 114 |
digestive system | 1.73e-11 | 145 |
digestive tract | 1.73e-11 | 145 |
primitive gut | 1.73e-11 | 145 |
endoderm-derived structure | 4.11e-10 | 160 |
endoderm | 4.11e-10 | 160 |
presumptive endoderm | 4.11e-10 | 160 |
neurectoderm | 2.29e-09 | 86 |
foregut | 3.03e-09 | 87 |
neural plate | 9.18e-09 | 82 |
presumptive neural plate | 9.18e-09 | 82 |
central nervous system | 5.06e-08 | 81 |
embryo | 5.16e-08 | 592 |
ectoderm-derived structure | 7.13e-08 | 171 |
ectoderm | 7.13e-08 | 171 |
presumptive ectoderm | 7.13e-08 | 171 |
larynx | 2.00e-07 | 9 |
cerebral cortex | 8.76e-07 | 25 |
pallium | 8.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.43e-07 | 106 |